RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 CLEC1BQ9P126 229 aa7.73□□□□□ -1.17
UBR1-205ENST00000564540 LRP2BPQ9P2M1 347 aa7.73□□□□□ -1.17
UBR1-205ENST00000564540 FBLN5Q9UBX5 448 aa7.73□□□□□ -1.17
UBR1-205ENST00000564540 MBD1Q9UIS9 605 aaPredicted RBP7.73□□□□□ -1.17
UBR1-205ENST00000564540 SMG5Q9UPR3 1016 aaKnown RBP7.73□□□□□ -1.17
UBR1-205ENST00000564540 TCAF2A6NFQ2 919 aa7.72□□□□□ -1.17
UBR1-205ENST00000564540 THBDP07204 575 aa7.72□□□□□ -1.17
UBR1-205ENST00000564540 PLS3P13797 630 aa7.72□□□□□ -1.17
UBR1-205ENST00000564540 PAMP19021 973 aa7.72□□□□□ -1.17
UBR1-205ENST00000564540 MBLAC2Q68D91 279 aa7.72□□□□□ -1.17
UBR1-205ENST00000564540 BICRALQ6AI39 1079 aa7.72□□□□□ -1.17
UBR1-205ENST00000564540 LILRA6Q6PI73 481 aa7.72□□□□□ -1.17
UBR1-205ENST00000564540 ZNF227Q86WZ6 799 aa7.72□□□□□ -1.17
UBR1-205ENST00000564540 NKX2-4Q9H2Z4 354 aa7.72□□□□□ -1.17
UBR1-205ENST00000564540 A0A1W2PQJ5 194 aa7.71□□□□□ -1.18
UBR1-205ENST00000564540 HRKO00198 91 aa7.71□□□□□ -1.18
UBR1-205ENST00000564540 PPP1R11O60927 126 aaPredicted RBP7.71□□□□□ -1.18
UBR1-205ENST00000564540 CFPP27918 469 aa7.71□□□□□ -1.18
UBR1-205ENST00000564540 CORO7P57737 925 aa7.71□□□□□ -1.18
UBR1-205ENST00000564540 KCNA10Q16322 511 aa7.71□□□□□ -1.18
UBR1-205ENST00000564540 DDR2Q16832 855 aa7.71□□□□□ -1.18
UBR1-205ENST00000564540 TMC6Q7Z403 805 aa7.71□□□□□ -1.18
UBR1-205ENST00000564540 NLGN2Q8NFZ4 835 aa7.71□□□□□ -1.18
UBR1-205ENST00000564540 CNTD2Q9H8S5 307 aa7.71□□□□□ -1.18
UBR1-205ENST00000564540 CYP26B1Q9NR63 512 aa7.71□□□□□ -1.18
UBR1-205ENST00000564540 SIRT5Q9NXA8 310 aa7.71□□□□□ -1.18
UBR1-205ENST00000564540 GULP1Q9UBP9 304 aa7.71□□□□□ -1.18
UBR1-205ENST00000564540 RWDD3Q9Y3V2 267 aa7.71□□□□□ -1.18
UBR1-205ENST00000564540 HCFC2Q9Y5Z7 792 aa7.71□□□□□ -1.18
UBR1-205ENST00000564540 DBHP09172 617 aa7.7□□□□□ -1.18
UBR1-205ENST00000564540 EPHB3P54753 998 aa7.7□□□□□ -1.18
UBR1-205ENST00000564540 SF1Q15637 639 aaKnown RBP7.7□□□□□ -1.18
UBR1-205ENST00000564540 SLC10A6Q3KNW5 377 aa7.7□□□□□ -1.18
UBR1-205ENST00000564540 PLEKHN1Q494U1 663 aaPredicted RBP7.7□□□□□ -1.18
UBR1-205ENST00000564540 EEPD1Q7L9B9 569 aa7.7□□□□□ -1.18
UBR1-205ENST00000564540 C7orf72A4D263 438 aa7.69□□□□□ -1.18
UBR1-205ENST00000564540 ABLIM1O14639 778 aa7.69□□□□□ -1.18
UBR1-205ENST00000564540 LINC00310P59036 64 aa7.69□□□□□ -1.18
UBR1-205ENST00000564540 CBX2Q14781 532 aaPredicted RBP7.69□□□□□ -1.18
UBR1-205ENST00000564540 C1QL4Q86Z23 238 aa7.69□□□□□ -1.18
UBR1-205ENST00000564540 LRRC56Q8IYG6 542 aaPredicted RBP7.69□□□□□ -1.18
UBR1-205ENST00000564540 FRS2Q8WU20 508 aa7.69□□□□□ -1.18
UBR1-205ENST00000564540 RXFP1Q9HBX9 757 aa7.69□□□□□ -1.18
UBR1-205ENST00000564540 ECI1P42126 302 aa7.68□□□□□ -1.18
UBR1-205ENST00000564540 GRIA2P42262 883 aa7.68□□□□□ -1.18
UBR1-205ENST00000564540 CDR1P51861 262 aa7.68□□□□□ -1.18
UBR1-205ENST00000564540 INF2Q27J81 1249 aa7.68□□□□□ -1.18
UBR1-205ENST00000564540 PRSS53Q2L4Q9 553 aa7.68□□□□□ -1.18
UBR1-205ENST00000564540 OLFML2BQ68BL8 750 aa7.68□□□□□ -1.18
UBR1-205ENST00000564540 PAQR3Q6TCH7 311 aa7.68□□□□□ -1.18
UBR1-205ENST00000564540 LZTR1Q8N653 840 aa7.68□□□□□ -1.18
UBR1-205ENST00000564540 NPLOC4Q8TAT6 608 aa7.68□□□□□ -1.18
UBR1-205ENST00000564540 TOX2Q96NM4 488 aa7.68□□□□□ -1.18
UBR1-205ENST00000564540 TANGO6Q9C0B7 1094 aa7.68□□□□□ -1.18
UBR1-205ENST00000564540 PLA2G2DQ9UNK4 145 aa7.68□□□□□ -1.18
UBR1-205ENST00000564540 TRBV23OR9-2A0A075B6M9 112 aa7.67□□□□□ -1.18
UBR1-205ENST00000564540 ARNTLO00327 626 aa7.67□□□□□ -1.18
UBR1-205ENST00000564540 SRGAP3O43295 1099 aa7.67□□□□□ -1.18
UBR1-205ENST00000564540 STK10O94804 968 aaKnown RBP7.67□□□□□ -1.18
UBR1-205ENST00000564540 CYBBP04839 570 aa7.67□□□□□ -1.18
UBR1-205ENST00000564540 SNRPB2P08579 225 aaKnown RBP7.67□□□□□ -1.18
UBR1-205ENST00000564540 GLI4P10075 376 aa7.67□□□□□ -1.18
UBR1-205ENST00000564540 MAPKAPK2P49137 400 aa7.67□□□□□ -1.18
UBR1-205ENST00000564540 NCKAP1LP55160 1127 aa7.67□□□□□ -1.18
UBR1-205ENST00000564540 TMEM62Q0P6H9 643 aa7.67□□□□□ -1.18
UBR1-205ENST00000564540 RAB33AQ14088 237 aa7.67□□□□□ -1.18
UBR1-205ENST00000564540 SSPNQ14714 243 aa7.67□□□□□ -1.18
UBR1-205ENST00000564540 NR1I3Q14994 352 aa7.67□□□□□ -1.18
UBR1-205ENST00000564540 SIAH1Q8IUQ4 282 aa7.67□□□□□ -1.18
UBR1-205ENST00000564540 MTA3Q9BTC8 594 aa7.67□□□□□ -1.18
UBR1-205ENST00000564540 RAPGEFL1Q9UHV5 662 aa7.67□□□□□ -1.18
UBR1-205ENST00000564540 TMEFF2Q9UIK5 374 aaPredicted RBP7.67□□□□□ -1.18
UBR1-205ENST00000564540 ZC3H12DA2A288 527 aaKnown RBP7.66□□□□□ -1.18
UBR1-205ENST00000564540 B8ZZF3 427 aa7.66□□□□□ -1.18
UBR1-205ENST00000564540 F8W031 263 aaPredicted RBP7.66□□□□□ -1.18
UBR1-205ENST00000564540 N4BP3O15049 544 aa7.66□□□□□ -1.18
UBR1-205ENST00000564540 ZNF200P98182 395 aaPredicted RBP7.66□□□□□ -1.18
UBR1-205ENST00000564540 KRTAP5-3Q6L8H2 238 aa7.66□□□□□ -1.18
UBR1-205ENST00000564540 ZC3H14Q6PJT7 736 aaKnown RBP7.66□□□□□ -1.18
UBR1-205ENST00000564540 LDHDQ86WU2 507 aa7.66□□□□□ -1.18
UBR1-205ENST00000564540 CCDC103Q8IW40 242 aa7.66□□□□□ -1.18
UBR1-205ENST00000564540 MZB1Q8WU39 189 aa7.66□□□□□ -1.18
UBR1-205ENST00000564540 DPF3Q92784 378 aa7.66□□□□□ -1.18
UBR1-205ENST00000564540 MMP19Q99542 508 aa7.66□□□□□ -1.18
UBR1-205ENST00000564540 EPN3Q9H201 632 aa7.66□□□□□ -1.18
UBR1-205ENST00000564540 CNOT6Q9ULM6 557 aaKnown RBP7.66□□□□□ -1.18
UBR1-205ENST00000564540 A0A1W2PQU0 124 aa7.65□□□□□ -1.18
UBR1-205ENST00000564540 NUAK1O60285 661 aa7.65□□□□□ -1.18
UBR1-205ENST00000564540 NPHS1O60500 1241 aa7.65□□□□□ -1.18
UBR1-205ENST00000564540 HOXC12P31275 282 aa7.65□□□□□ -1.18
UBR1-205ENST00000564540 KCNJ6P48051 423 aa7.65□□□□□ -1.18
UBR1-205ENST00000564540 PPP2R2AP63151 447 aa7.65□□□□□ -1.18
UBR1-205ENST00000564540 PRR5P85299 388 aa7.65□□□□□ -1.18
UBR1-205ENST00000564540 LCNL1Q6ZST4 164 aa7.65□□□□□ -1.18
UBR1-205ENST00000564540 IGDCC3Q8IVU1 814 aa7.65□□□□□ -1.18
UBR1-205ENST00000564540 KREMEN2Q8NCW0 462 aa7.65□□□□□ -1.18
UBR1-205ENST00000564540 PANK1Q8TE04 598 aa7.65□□□□□ -1.18
UBR1-205ENST00000564540 C8orf37Q96NL8 207 aa7.65□□□□□ -1.18
UBR1-205ENST00000564540 TRIM55Q9BYV6 548 aa7.65□□□□□ -1.18
UBR1-205ENST00000564540 IRF2BPLQ9H1B7 796 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms