RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 KATNBL1Q9H079 304 aa11.19□□□□□ -0.62
CLN6-203ENST00000563917 HIPK3Q9H422 1215 aa11.19□□□□□ -0.62
CLN6-203ENST00000563917 CNNM2Q9H8M5 875 aa11.19□□□□□ -0.62
CLN6-203ENST00000563917 GNEQ9Y223 722 aaKnown RBP11.19□□□□□ -0.62
CLN6-203ENST00000563917 NFIBO00712 420 aa11.18□□□□□ -0.62
CLN6-203ENST00000563917 NKRFO15226 690 aaKnown RBP eCLIP11.18□□□□□ -0.62
CLN6-203ENST00000563917 KDM4AO75164 1064 aa11.18□□□□□ -0.62
CLN6-203ENST00000563917 SUPT20HL2P0C7V6 817 aa11.18□□□□□ -0.62
CLN6-203ENST00000563917 FOSL2P15408 326 aa11.18□□□□□ -0.62
CLN6-203ENST00000563917 TRDNQ13061 729 aa11.18□□□□□ -0.62
CLN6-203ENST00000563917 PPP2R5BQ15173 497 aa11.18□□□□□ -0.62
CLN6-203ENST00000563917 USH1GQ495M9 461 aa11.18□□□□□ -0.62
CLN6-203ENST00000563917 DUSP28Q4G0W2 176 aa11.18□□□□□ -0.62
CLN6-203ENST00000563917 TAPT1Q6NXT6 567 aa11.18□□□□□ -0.62
CLN6-203ENST00000563917 MCF2L2Q86YR7 1114 aa11.18□□□□□ -0.62
CLN6-203ENST00000563917 PNMA1Q8ND90 353 aa11.18□□□□□ -0.62
CLN6-203ENST00000563917 DNERQ8NFT8 737 aa11.18□□□□□ -0.62
CLN6-203ENST00000563917 OR6J1Q8NGC5 347 aa11.18□□□□□ -0.62
CLN6-203ENST00000563917 MORC4Q8TE76 937 aa11.18□□□□□ -0.62
CLN6-203ENST00000563917 ZKSCAN3Q9BRR0 538 aa11.18□□□□□ -0.62
CLN6-203ENST00000563917 DSCC1Q9BVC3 393 aa11.18□□□□□ -0.62
CLN6-203ENST00000563917 PDGFCQ9NRA1 345 aa11.18□□□□□ -0.62
CLN6-203ENST00000563917 KPNA6O60684 536 aa11.17□□□□□ -0.62
CLN6-203ENST00000563917 IGHDP01880 384 aa11.17□□□□□ -0.62
CLN6-203ENST00000563917 MYL3P08590 195 aa11.17□□□□□ -0.62
CLN6-203ENST00000563917 GOLGA8HP0CJ92 632 aa11.17□□□□□ -0.62
CLN6-203ENST00000563917 SNHG28P0DPA3 235 aa11.17□□□□□ -0.62
CLN6-203ENST00000563917 CSF2RAP15509 400 aa11.17□□□□□ -0.62
CLN6-203ENST00000563917 DNAJB2P25686 324 aa11.17□□□□□ -0.62
CLN6-203ENST00000563917 EPHB4P54760 987 aa11.17□□□□□ -0.62
CLN6-203ENST00000563917 RPS6P62753 249 aaKnown RBP11.17□□□□□ -0.62
CLN6-203ENST00000563917 ASPRV1Q53RT3 343 aa11.17□□□□□ -0.62
CLN6-203ENST00000563917 TBC1D10CQ8IV04 446 aa11.17□□□□□ -0.62
CLN6-203ENST00000563917 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.17□□□□□ -0.62
CLN6-203ENST00000563917 RPUSD2Q8IZ73 545 aaKnown RBP11.17□□□□□ -0.62
CLN6-203ENST00000563917 MAFAQ8NHW3 353 aaPredicted RBP11.17□□□□□ -0.62
CLN6-203ENST00000563917 EXOC6Q8TAG9 804 aa11.17□□□□□ -0.62
CLN6-203ENST00000563917 SCFD2Q8WU76 684 aa11.17□□□□□ -0.62
CLN6-203ENST00000563917 RUFY2Q8WXA3 655 aa11.17□□□□□ -0.62
CLN6-203ENST00000563917 ZSCAN10Q96SZ4 725 aaPredicted RBP11.17□□□□□ -0.62
CLN6-203ENST00000563917 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.17□□□□□ -0.62
CLN6-203ENST00000563917 MAF1Q9H063 256 aa11.17□□□□□ -0.62
CLN6-203ENST00000563917 MSRAQ9UJ68 235 aa11.17□□□□□ -0.62
CLN6-203ENST00000563917 ASTN1O14525 1302 aa11.16□□□□□ -0.62
CLN6-203ENST00000563917 ABCB11O95342 1321 aa11.16□□□□□ -0.62
CLN6-203ENST00000563917 NEDD4P46934 1319 aa11.16□□□□□ -0.62
CLN6-203ENST00000563917 DNAH12Q6ZR08 3092 aa11.16□□□□□ -0.62
CLN6-203ENST00000563917 B4E1Z4 1266 aa11.16□□□□□ -0.62
CLN6-203ENST00000563917 CTAGE5O15320 804 aa11.16□□□□□ -0.62
CLN6-203ENST00000563917 CD4P01730 458 aa11.16□□□□□ -0.62
CLN6-203ENST00000563917 FGBP02675 491 aa11.16□□□□□ -0.62
CLN6-203ENST00000563917 PARP1P09874 1014 aaKnown RBP11.16□□□□□ -0.62
CLN6-203ENST00000563917 TXNP10599 105 aaKnown RBP11.16□□□□□ -0.62
CLN6-203ENST00000563917 CYP2C18P33260 490 aa11.16□□□□□ -0.62
CLN6-203ENST00000563917 TTLL4Q14679 1199 aa11.16□□□□□ -0.62
CLN6-203ENST00000563917 CDC37Q16543 378 aaPredicted RBP11.16□□□□□ -0.62
CLN6-203ENST00000563917 FAM47CQ5HY64 1035 aa11.16□□□□□ -0.62
CLN6-203ENST00000563917 IFIT1BQ5T764 474 aaKnown RBP11.16□□□□□ -0.62
CLN6-203ENST00000563917 SLC30A10Q6XR72 485 aa11.16□□□□□ -0.62
CLN6-203ENST00000563917 ZNF365Q70YC5 407 aa11.16□□□□□ -0.62
CLN6-203ENST00000563917 SLC43A3Q8NBI5 491 aa11.16□□□□□ -0.62
CLN6-203ENST00000563917 RGS22Q8NE09 1264 aa11.16□□□□□ -0.62
CLN6-203ENST00000563917 MYLIPQ8WY64 445 aa11.16□□□□□ -0.62
CLN6-203ENST00000563917 TIFAQ96CG3 184 aa11.16□□□□□ -0.62
CLN6-203ENST00000563917 PURBQ96QR8 312 aaKnown RBP11.16□□□□□ -0.62
CLN6-203ENST00000563917 MTG1Q9BT17 334 aaPredicted RBP11.16□□□□□ -0.62
CLN6-203ENST00000563917 UBA5Q9GZZ9 404 aa11.16□□□□□ -0.62
CLN6-203ENST00000563917 IL23AQ9NPF7 189 aa11.16□□□□□ -0.62
CLN6-203ENST00000563917 NOD1Q9Y239 953 aa11.16□□□□□ -0.62
CLN6-203ENST00000563917 MRPL11Q9Y3B7 192 aaKnown RBP11.16□□□□□ -0.62
CLN6-203ENST00000563917 TNKSO95271 1327 aa11.15□□□□□ -0.62
CLN6-203ENST00000563917 ERICH2A1L162 156 aa11.15□□□□□ -0.62
CLN6-203ENST00000563917 ACRP10323 421 aa11.15□□□□□ -0.62
CLN6-203ENST00000563917 TRAF1Q13077 416 aa11.15□□□□□ -0.62
CLN6-203ENST00000563917 RAB30Q15771 203 aa11.15□□□□□ -0.62
CLN6-203ENST00000563917 TMEM240Q5SV17 173 aa11.15□□□□□ -0.62
CLN6-203ENST00000563917 FBXO11Q86XK2 927 aa11.15□□□□□ -0.62
CLN6-203ENST00000563917 CLEC4DQ8WXI8 215 aa11.15□□□□□ -0.62
CLN6-203ENST00000563917 GAS2L1Q99501 681 aaPredicted RBP11.15□□□□□ -0.62
CLN6-203ENST00000563917 TRPV6Q9H1D0 765 aa11.15□□□□□ -0.62
CLN6-203ENST00000563917 TTYH1Q9H313 450 aaPredicted RBP11.15□□□□□ -0.62
CLN6-203ENST00000563917 VAT1LQ9HCJ6 419 aa11.15□□□□□ -0.62
CLN6-203ENST00000563917 DDX49Q9Y6V7 483 aaKnown RBP11.15□□□□□ -0.62
CLN6-203ENST00000563917 LAMA3Q16787 3333 aa11.15□□□□□ -0.62
CLN6-203ENST00000563917 RBM47A0AV96 593 aaKnown RBP11.14□□□□□ -0.63
CLN6-203ENST00000563917 B4GALT4O60513 344 aa11.14□□□□□ -0.63
CLN6-203ENST00000563917 ACTN1P12814 892 aa11.14□□□□□ -0.63
CLN6-203ENST00000563917 CCL23P55773 120 aa11.14□□□□□ -0.63
CLN6-203ENST00000563917 CHMP4BP1P59074 171 aa11.14□□□□□ -0.63
CLN6-203ENST00000563917 PSMC6P62333 389 aa11.14□□□□□ -0.63
CLN6-203ENST00000563917 PURAQ00577 322 aaKnown RBP11.14□□□□□ -0.63
CLN6-203ENST00000563917 SART3Q15020 963 aaKnown RBP11.14□□□□□ -0.63
CLN6-203ENST00000563917 STXBP2Q15833 593 aa11.14□□□□□ -0.63
CLN6-203ENST00000563917 ARHGEF16Q5VV41 709 aa11.14□□□□□ -0.63
CLN6-203ENST00000563917 ADGRF4Q8IZF3 695 aa11.14□□□□□ -0.63
CLN6-203ENST00000563917 RETREG2Q8NC44 543 aa11.14□□□□□ -0.63
CLN6-203ENST00000563917 NSUN6Q8TEA1 469 aaKnown RBP11.14□□□□□ -0.63
CLN6-203ENST00000563917 ANKS1AQ92625 1134 aa11.14□□□□□ -0.63
CLN6-203ENST00000563917 ALDH8A1Q9H2A2 487 aaPredicted RBP11.14□□□□□ -0.63
CLN6-203ENST00000563917 ZNF576Q9H609 170 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms