RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 AKR1A1P14550 325 aa11.72□□□□□ -0.53
HERC1-212ENST00000561348 RPS6KB1P23443 525 aa11.72□□□□□ -0.53
HERC1-212ENST00000561348 HOXA13P31271 388 aaPredicted RBP11.72□□□□□ -0.53
HERC1-212ENST00000561348 ATN1P54259 1190 aaPredicted RBP11.72□□□□□ -0.53
HERC1-212ENST00000561348 EXOSC10Q01780 885 aaKnown RBP11.72□□□□□ -0.53
HERC1-212ENST00000561348 RTN1Q16799 776 aa11.72□□□□□ -0.53
HERC1-212ENST00000561348 CCDC144BQ3MJ40 725 aa11.72□□□□□ -0.53
HERC1-212ENST00000561348 TSGA10IPQ3SY00 556 aa11.72□□□□□ -0.53
HERC1-212ENST00000561348 LHX8Q68G74 356 aa11.72□□□□□ -0.53
HERC1-212ENST00000561348 APOA5Q6Q788 366 aa11.72□□□□□ -0.53
HERC1-212ENST00000561348 FCHSD1Q86WN1 690 aa11.72□□□□□ -0.53
HERC1-212ENST00000561348 MCF2L2Q86YR7 1114 aa11.72□□□□□ -0.53
HERC1-212ENST00000561348 FBXO16Q8IX29 292 aaPredicted RBP11.72□□□□□ -0.53
HERC1-212ENST00000561348 SRBD1Q8N5C6 995 aaKnown RBP11.72□□□□□ -0.53
HERC1-212ENST00000561348 ARRDC4Q8NCT1 418 aa11.72□□□□□ -0.53
HERC1-212ENST00000561348 VTI1AQ96AJ9 217 aa11.72□□□□□ -0.53
HERC1-212ENST00000561348 MPHOSPH6Q99547 160 aaKnown RBP11.72□□□□□ -0.53
HERC1-212ENST00000561348 MTA3Q9BTC8 594 aa11.72□□□□□ -0.53
HERC1-212ENST00000561348 HTATIP2Q9BUP3 242 aa11.72□□□□□ -0.53
HERC1-212ENST00000561348 SENP6Q9GZR1 1112 aaPredicted RBP11.72□□□□□ -0.53
HERC1-212ENST00000561348 CRISPLD2Q9H0B8 497 aa11.72□□□□□ -0.53
HERC1-212ENST00000561348 C11orf49Q9H6J7 331 aa11.72□□□□□ -0.53
HERC1-212ENST00000561348 CYP46A1Q9Y6A2 500 aa11.72□□□□□ -0.53
HERC1-212ENST00000561348 SYNGAP1Q96PV0 1343 aa11.71□□□□□ -0.53
HERC1-212ENST00000561348 PPP1R11O60927 126 aaPredicted RBP11.71□□□□□ -0.53
HERC1-212ENST00000561348 ZNF865P0CJ78 1059 aaPredicted RBP11.71□□□□□ -0.53
HERC1-212ENST00000561348 MYCLP12524 364 aaPredicted RBP11.71□□□□□ -0.53
HERC1-212ENST00000561348 EIF2AK2P19525 551 aaKnown RBP11.71□□□□□ -0.53
HERC1-212ENST00000561348 ADCYAP1R1P41586 468 aa11.71□□□□□ -0.53
HERC1-212ENST00000561348 METAP2P50579 478 aaKnown RBP eCLIP11.71□□□□□ -0.53
HERC1-212ENST00000561348 ALDH5A1P51649 535 aaPredicted RBP11.71□□□□□ -0.53
HERC1-212ENST00000561348 CCT2P78371 535 aaKnown RBP11.71□□□□□ -0.53
HERC1-212ENST00000561348 SLC35G1Q2M3R5 365 aa11.71□□□□□ -0.53
HERC1-212ENST00000561348 ARHGEF16Q5VV41 709 aa11.71□□□□□ -0.53
HERC1-212ENST00000561348 HEATR3Q7Z4Q2 680 aa11.71□□□□□ -0.53
HERC1-212ENST00000561348 ZNF467Q7Z7K2 595 aaPredicted RBP11.71□□□□□ -0.53
HERC1-212ENST00000561348 MSL3Q8N5Y2 521 aaKnown RBP11.71□□□□□ -0.53
HERC1-212ENST00000561348 FGD4Q96M96 766 aa11.71□□□□□ -0.53
HERC1-212ENST00000561348 TAAR1Q96RJ0 339 aa11.71□□□□□ -0.53
HERC1-212ENST00000561348 LZTS2Q9BRK4 669 aa11.71□□□□□ -0.53
HERC1-212ENST00000561348 ABHD16BQ9H3Z7 469 aa11.71□□□□□ -0.53
HERC1-212ENST00000561348 RIOX1Q9H6W3 641 aa11.71□□□□□ -0.53
HERC1-212ENST00000561348 PDGFCQ9NRA1 345 aa11.71□□□□□ -0.53
HERC1-212ENST00000561348 OGDHLQ9ULD0 1010 aa11.71□□□□□ -0.53
HERC1-212ENST00000561348 B4DLN1 442 aa11.7□□□□□ -0.54
HERC1-212ENST00000561348 EVI5O60447 810 aa11.7□□□□□ -0.54
HERC1-212ENST00000561348 C6orf222P0C671 652 aaPredicted RBP11.7□□□□□ -0.54
HERC1-212ENST00000561348 MRPL12P52815 198 aaKnown RBP11.7□□□□□ -0.54
HERC1-212ENST00000561348 CHMP4BP1P59074 171 aa11.7□□□□□ -0.54
HERC1-212ENST00000561348 TNFAIP2Q03169 654 aa11.7□□□□□ -0.54
HERC1-212ENST00000561348 TRAF1Q13077 416 aa11.7□□□□□ -0.54
HERC1-212ENST00000561348 STK3Q13188 491 aa11.7□□□□□ -0.54
HERC1-212ENST00000561348 MAMDC4Q6UXC1 1216 aa11.7□□□□□ -0.54
HERC1-212ENST00000561348 SEPT14Q6ZU15 432 aa11.7□□□□□ -0.54
HERC1-212ENST00000561348 RUFY3Q7L099 469 aa11.7□□□□□ -0.54
HERC1-212ENST00000561348 RNF180Q86T96 592 aa11.7□□□□□ -0.54
HERC1-212ENST00000561348 SGMS1Q86VZ5 419 aa11.7□□□□□ -0.54
HERC1-212ENST00000561348 C7orf61Q8IZ16 206 aa11.7□□□□□ -0.54
HERC1-212ENST00000561348 ANKLE1Q8NAG6 615 aa11.7□□□□□ -0.54
HERC1-212ENST00000561348 GPKOWQ92917 476 aaPredicted RBP eCLIP11.7□□□□□ -0.549e-6■■□□□ 14.5
HERC1-212ENST00000561348 ZFP91Q96JP5 570 aaPredicted RBP11.7□□□□□ -0.54
HERC1-212ENST00000561348 RMDN3Q96TC7 470 aa11.7□□□□□ -0.54
HERC1-212ENST00000561348 SPC25Q9HBM1 224 aa11.7□□□□□ -0.54
HERC1-212ENST00000561348 RBM28Q9NW13 759 aaKnown RBP11.7□□□□□ -0.54
HERC1-212ENST00000561348 ASTN1O14525 1302 aa11.69□□□□□ -0.54
HERC1-212ENST00000561348 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.69□□□□□ -0.54
HERC1-212ENST00000561348 GCOM1H8Y6P7 765 aaPredicted RBP11.69□□□□□ -0.54
HERC1-212ENST00000561348 SORBS3O60504 671 aa11.69□□□□□ -0.54
HERC1-212ENST00000561348 SEC24BO95487 1268 aa11.69□□□□□ -0.54
HERC1-212ENST00000561348 POLR2MP0CAP2 368 aa11.69□□□□□ -0.54
HERC1-212ENST00000561348 PTGS1P23219 599 aa11.69□□□□□ -0.54
HERC1-212ENST00000561348 ADD1P35611 737 aaKnown RBP11.69□□□□□ -0.54
HERC1-212ENST00000561348 IRX5P78411 483 aaPredicted RBP11.69□□□□□ -0.54
HERC1-212ENST00000561348 TMTC3Q6ZXV5 915 aa11.69□□□□□ -0.54
HERC1-212ENST00000561348 SMARCC2Q8TAQ2 1214 aa11.69□□□□□ -0.54
HERC1-212ENST00000561348 SYTL5Q8TDW5 730 aaPredicted RBP11.69□□□□□ -0.54
HERC1-212ENST00000561348 KCNB2Q92953 911 aa11.69□□□□□ -0.54
HERC1-212ENST00000561348 CUL5Q93034 780 aa11.69□□□□□ -0.54
HERC1-212ENST00000561348 MAP3K14Q99558 947 aa11.69□□□□□ -0.54
HERC1-212ENST00000561348 SPZ1Q9BXG8 430 aa11.69□□□□□ -0.54
HERC1-212ENST00000561348 AP5M1Q9H0R1 490 aa11.69□□□□□ -0.54
HERC1-212ENST00000561348 PDRG1Q9NUG6 133 aa11.69□□□□□ -0.54
HERC1-212ENST00000561348 COL20A1Q9P218 1284 aa11.69□□□□□ -0.54
HERC1-212ENST00000561348 V9GY48 417 aaPredicted RBP11.69□□□□□ -0.54
HERC1-212ENST00000561348 BRCA2P51587 3418 aa11.69□□□□□ -0.54
HERC1-212ENST00000561348 DYNC1LI2O43237 492 aaPredicted RBP11.68□□□□□ -0.54
HERC1-212ENST00000561348 CDC27P30260 824 aa11.68□□□□□ -0.54
HERC1-212ENST00000561348 BEX3Q00994 111 aa11.68□□□□□ -0.54
HERC1-212ENST00000561348 AKAP17AQ02040 695 aaKnown RBP11.68□□□□□ -0.54
HERC1-212ENST00000561348 LRRC41Q15345 812 aa11.68□□□□□ -0.54
HERC1-212ENST00000561348 GNASQ5JWF2 1037 aa11.68□□□□□ -0.54
HERC1-212ENST00000561348 TMEM63BQ5T3F8 832 aa11.68□□□□□ -0.54
HERC1-212ENST00000561348 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.68□□□□□ -0.54
HERC1-212ENST00000561348 NSUN6Q8TEA1 469 aaKnown RBP11.68□□□□□ -0.54
HERC1-212ENST00000561348 MTMR8Q96EF0 704 aa11.68□□□□□ -0.54
HERC1-212ENST00000561348 NCOA5Q9HCD5 579 aaKnown RBP11.68□□□□□ -0.54
HERC1-212ENST00000561348 ZSWIM6Q9HCJ5 1215 aa11.68□□□□□ -0.54
HERC1-212ENST00000561348 PCDH10Q9P2E7 1040 aa11.68□□□□□ -0.54
HERC1-212ENST00000561348 NRBP1Q9UHY1 535 aa11.68□□□□□ -0.54
HERC1-212ENST00000561348 GTF3C3Q9Y5Q9 886 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms