RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 SLC12A7Q9Y666 1083 aa7.92□□□□□ -1.14
LRRC28-220ENST00000561253 PARP4Q9UKK3 1724 aaKnown RBP7.92□□□□□ -1.14
LRRC28-220ENST00000561253 FAM86C2PA6NEL3 165 aa7.91□□□□□ -1.14
LRRC28-220ENST00000561253 U2SURPO15042 1029 aaKnown RBP7.91□□□□□ -1.14
LRRC28-220ENST00000561253 GBP1P32455 592 aa7.91□□□□□ -1.14
LRRC28-220ENST00000561253 CASP7P55210 303 aa7.91□□□□□ -1.14
LRRC28-220ENST00000561253 SEZ6L2Q6UXD5 910 aa7.91□□□□□ -1.14
LRRC28-220ENST00000561253 PRR23CQ6ZRP0 262 aa7.91□□□□□ -1.14
LRRC28-220ENST00000561253 TTC6Q86TZ1 520 aa7.91□□□□□ -1.14
LRRC28-220ENST00000561253 MIPEPQ99797 713 aa7.91□□□□□ -1.14
LRRC28-220ENST00000561253 C7orf69Q9H7B7 122 aa7.91□□□□□ -1.14
LRRC28-220ENST00000561253 PRDM10Q9NQV6 1147 aa7.91□□□□□ -1.14
LRRC28-220ENST00000561253 C1GALT1Q9NS00 363 aa7.91□□□□□ -1.14
LRRC28-220ENST00000561253 BCL9O00512 1426 aa7.91□□□□□ -1.14
LRRC28-220ENST00000561253 TNS2Q63HR2 1409 aa7.91□□□□□ -1.14
LRRC28-220ENST00000561253 LRRC37A3O60309 1634 aa7.91□□□□□ -1.14
LRRC28-220ENST00000561253 WNK3Q9BYP7 1800 aa7.91□□□□□ -1.14
LRRC28-220ENST00000561253 HMX2A2RU54 273 aa7.9□□□□□ -1.14
LRRC28-220ENST00000561253 RGS13O14921 159 aa7.9□□□□□ -1.14
LRRC28-220ENST00000561253 DIAPH1O60610 1272 aaKnown RBP7.9□□□□□ -1.14
LRRC28-220ENST00000561253 ITGB2P05107 769 aa7.9□□□□□ -1.14
LRRC28-220ENST00000561253 ACRP10323 421 aa7.9□□□□□ -1.14
LRRC28-220ENST00000561253 IL2RBP14784 551 aa7.9□□□□□ -1.14
LRRC28-220ENST00000561253 POLR2BP30876 1174 aaKnown RBP7.9□□□□□ -1.14
LRRC28-220ENST00000561253 CCNFP41002 786 aa7.9□□□□□ -1.14
LRRC28-220ENST00000561253 LETMD1Q6P1Q0 360 aa7.9□□□□□ -1.14
LRRC28-220ENST00000561253 TOP6BLQ8N6T0 577 aa7.9□□□□□ -1.14
LRRC28-220ENST00000561253 BAHD1Q8TBE0 780 aaPredicted RBP7.9□□□□□ -1.14
LRRC28-220ENST00000561253 TBC1D32Q96NH3 1257 aa7.9□□□□□ -1.14
LRRC28-220ENST00000561253 PSMG3-AS1Q96PY0 264 aa7.9□□□□□ -1.14
LRRC28-220ENST00000561253 SLC9A7Q96T83 725 aa7.9□□□□□ -1.14
LRRC28-220ENST00000561253 A0A1W2PQH9 124 aa7.89□□□□□ -1.15
LRRC28-220ENST00000561253 RAB33AQ14088 237 aa7.89□□□□□ -1.15
LRRC28-220ENST00000561253 DOC2BQ14184 412 aa7.89□□□□□ -1.15
LRRC28-220ENST00000561253 LARP1BQ659C4 914 aaKnown RBP7.89□□□□□ -1.15
LRRC28-220ENST00000561253 UNC5AQ6ZN44 842 aa7.89□□□□□ -1.15
LRRC28-220ENST00000561253 MARCH10Q8NA82 808 aaPredicted RBP7.89□□□□□ -1.15
LRRC28-220ENST00000561253 TNKS2Q9H2K2 1166 aa7.89□□□□□ -1.15
LRRC28-220ENST00000561253 SHANK3Q9BYB0 1731 aa7.89□□□□□ -1.15
LRRC28-220ENST00000561253 BRWD3Q6RI45 1802 aa7.88□□□□□ -1.15
LRRC28-220ENST00000561253 CYP27B1O15528 508 aa7.88□□□□□ -1.15
LRRC28-220ENST00000561253 KLF4O43474 513 aa7.88□□□□□ -1.15
LRRC28-220ENST00000561253 SLITRK5O94991 958 aa7.88□□□□□ -1.15
LRRC28-220ENST00000561253 ZYXQ15942 572 aaKnown RBP7.88□□□□□ -1.15
LRRC28-220ENST00000561253 SULT6B1Q6IMI4 303 aa7.88□□□□□ -1.15
LRRC28-220ENST00000561253 DHRS1Q96LJ7 313 aa7.88□□□□□ -1.15
LRRC28-220ENST00000561253 PLEKHF1Q96S99 279 aa7.88□□□□□ -1.15
LRRC28-220ENST00000561253 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.88□□□□□ -1.15
LRRC28-220ENST00000561253 CEP131Q9UPN4 1083 aa7.88□□□□□ -1.15
LRRC28-220ENST00000561253 PKD1L3Q7Z443 1732 aa7.88□□□□□ -1.15
LRRC28-220ENST00000561253 ANP32CO43423 234 aa7.87□□□□□ -1.15
LRRC28-220ENST00000561253 UBOX5O94941 541 aa7.87□□□□□ -1.15
LRRC28-220ENST00000561253 FAM87AP0C7U9 286 aa7.87□□□□□ -1.15
LRRC28-220ENST00000561253 FXNQ16595 210 aa7.87□□□□□ -1.15
LRRC28-220ENST00000561253 ZNF746Q6NUN9 644 aaPredicted RBP7.87□□□□□ -1.15
LRRC28-220ENST00000561253 KRT27Q7Z3Y8 459 aa7.87□□□□□ -1.15
LRRC28-220ENST00000561253 ZAR1Q86SH2 424 aa7.87□□□□□ -1.15
LRRC28-220ENST00000561253 FBXL6Q8N531 539 aa7.87□□□□□ -1.15
LRRC28-220ENST00000561253 PNISRQ8TF01 805 aaKnown RBP7.87□□□□□ -1.15
LRRC28-220ENST00000561253 PHACTR3Q96KR7 559 aa7.87□□□□□ -1.15
LRRC28-220ENST00000561253 CFAP53Q96M91 514 aa7.87□□□□□ -1.15
LRRC28-220ENST00000561253 MFSD14AQ96MC6 490 aa7.87□□□□□ -1.15
LRRC28-220ENST00000561253 DUSP23Q9BVJ7 150 aa7.87□□□□□ -1.15
LRRC28-220ENST00000561253 LNPKQ9C0E8 428 aa7.87□□□□□ -1.15
LRRC28-220ENST00000561253 PHAXQ9H814 394 aaKnown RBP7.87□□□□□ -1.15
LRRC28-220ENST00000561253 TPX2Q9ULW0 747 aaKnown RBP7.87□□□□□ -1.15
LRRC28-220ENST00000561253 MSTNO14793 375 aa7.86□□□□□ -1.15
LRRC28-220ENST00000561253 CLEC3AO75596 197 aa7.86□□□□□ -1.15
LRRC28-220ENST00000561253 HMOX1P09601 288 aa7.86□□□□□ -1.15
LRRC28-220ENST00000561253 ETV3P41162 512 aa7.86□□□□□ -1.15
LRRC28-220ENST00000561253 DDB1Q16531 1140 aa7.86□□□□□ -1.15
LRRC28-220ENST00000561253 RNF43Q68DV7 783 aa7.86□□□□□ -1.15
LRRC28-220ENST00000561253 DPH6Q7L8W6 267 aa7.86□□□□□ -1.15
LRRC28-220ENST00000561253 CDH24Q86UP0 819 aa7.86□□□□□ -1.15
LRRC28-220ENST00000561253 RIN3Q8TB24 985 aa7.86□□□□□ -1.15
LRRC28-220ENST00000561253 ZCRB1Q8TBF4 217 aaKnown RBP7.86□□□□□ -1.15
LRRC28-220ENST00000561253 PPP1R13LQ8WUF5 828 aa7.86□□□□□ -1.15
LRRC28-220ENST00000561253 RAPGEF4Q8WZA2 1011 aa7.86□□□□□ -1.15
LRRC28-220ENST00000561253 SLC6A18Q96N87 628 aa7.86□□□□□ -1.15
LRRC28-220ENST00000561253 SPOCK3Q9BQ16 436 aa7.86□□□□□ -1.15
LRRC28-220ENST00000561253 OSBPL2Q9H1P3 480 aa7.86□□□□□ -1.15
LRRC28-220ENST00000561253 LTBP3Q9NS15 1303 aa7.85□□□□□ -1.15
LRRC28-220ENST00000561253 EXOC5O00471 708 aa7.85□□□□□ -1.15
LRRC28-220ENST00000561253 GSC2O15499 205 aa7.85□□□□□ -1.15
LRRC28-220ENST00000561253 LEFTY1O75610 366 aa7.85□□□□□ -1.15
LRRC28-220ENST00000561253 H2AFB1P0C5Y9 115 aa7.85□□□□□ -1.15
LRRC28-220ENST00000561253 H2AFB2P0C5Z0 115 aa7.85□□□□□ -1.15
LRRC28-220ENST00000561253 CYP7A1P22680 504 aa7.85□□□□□ -1.15
LRRC28-220ENST00000561253 ADMP35318 185 aa7.85□□□□□ -1.15
LRRC28-220ENST00000561253 CYP27C1Q4G0S4 372 aa7.85□□□□□ -1.15
LRRC28-220ENST00000561253 GPAT2Q6NUI2 795 aa7.85□□□□□ -1.15
LRRC28-220ENST00000561253 OGFOD3Q6PK18 319 aa7.85□□□□□ -1.15
LRRC28-220ENST00000561253 PTF1AQ7RTS3 328 aa7.85□□□□□ -1.15
LRRC28-220ENST00000561253 DNAJB8Q8NHS0 232 aa7.85□□□□□ -1.15
LRRC28-220ENST00000561253 ST7Q9NRC1 585 aa7.85□□□□□ -1.15
LRRC28-220ENST00000561253 SIRPGQ9P1W8 387 aa7.85□□□□□ -1.15
LRRC28-220ENST00000561253 KDM6AO15550 1401 aaPredicted RBP7.85□□□□□ -1.15
LRRC28-220ENST00000561253 ADAMTS7Q9UKP4 1686 aa7.84□□□□□ -1.15
LRRC28-220ENST00000561253 CCER2I3L3R5 266 aa7.84□□□□□ -1.15
LRRC28-220ENST00000561253 DDAH1O94760 285 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms