RNA–Protein interactions for RNA: ENST00000561208.5

MEIS2-222, Transcript of Meis homeobox 2, human

TSL 1 (best) BASIC

Gene MEIS2, Length 4,822 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MEIS2-222	ENST00000561208	METTL14	Q9HCE5	456 aa	Known RBP	11.63	□□□□□ -0.55
MEIS2-222	ENST00000561208	USP42	Q9H9J4	1324 aa	Known RBP	11.63	□□□□□ -0.55
MEIS2-222	ENST00000561208	TARSL2	A2RTX5	802 aa	Known RBP	11.63	□□□□□ -0.55
MEIS2-222	ENST00000561208	CHMP2A	O43633	222 aa		11.63	□□□□□ -0.55
MEIS2-222	ENST00000561208	BCAM	P50895	628 aa		11.63	□□□□□ -0.55
MEIS2-222	ENST00000561208	SESN3	P58005	492 aa		11.63	□□□□□ -0.55
MEIS2-222	ENST00000561208	FKBP3	Q00688	224 aa	Known RBP	11.63	□□□□□ -0.55
MEIS2-222	ENST00000561208	CUL1	Q13616	776 aa		11.63	□□□□□ -0.55
MEIS2-222	ENST00000561208	NBPF9	Q3BBW0	867 aa		11.63	□□□□□ -0.55
MEIS2-222	ENST00000561208	EPHA10	Q5JZY3	1008 aa		11.63	□□□□□ -0.55
MEIS2-222	ENST00000561208	NDST4	Q9H3R1	872 aa		11.63	□□□□□ -0.55
MEIS2-222	ENST00000561208	RFX7	Q2KHR2	1363 aa		11.63	□□□□□ -0.55
MEIS2-222	ENST00000561208	FOXN1	O15353	648 aa		11.63	□□□□□ -0.55
MEIS2-222	ENST00000561208	EIF3B	P55884	814 aa	Known RBP	11.63	□□□□□ -0.55
MEIS2-222	ENST00000561208	WDR44	Q5JSH3	913 aa		11.63	□□□□□ -0.55
MEIS2-222	ENST00000561208	P3H4	Q92791	437 aa		11.63	□□□□□ -0.55
MEIS2-222	ENST00000561208	MAGOHB	Q96A72	148 aa	Known RBP	11.63	□□□□□ -0.55
MEIS2-222	ENST00000561208	RIC8A	Q9NPQ8	531 aa		11.63	□□□□□ -0.55
MEIS2-222	ENST00000561208	PCDHA12	Q9UN75	941 aa		11.63	□□□□□ -0.55
MEIS2-222	ENST00000561208	AGTPBP1	Q9UPW5	1226 aa		11.63	□□□□□ -0.55
MEIS2-222	ENST00000561208	PASK	Q96RG2	1323 aa		11.63	□□□□□ -0.55
MEIS2-222	ENST00000561208	SHROOM2	Q13796	1616 aa		11.63	□□□□□ -0.55
MEIS2-222	ENST00000561208	ADCY10	Q96PN6	1610 aa		11.63	□□□□□ -0.55
MEIS2-222	ENST00000561208	LOC102724159	A0A0B4J2E5	919 aa		11.62	□□□□□ -0.55
MEIS2-222	ENST00000561208	PRPF3	O43395	683 aa	Known RBP	11.62	□□□□□ -0.55
MEIS2-222	ENST00000561208	ADCY8	P40145	1251 aa		11.62	□□□□□ -0.55
MEIS2-222	ENST00000561208	PWP2	Q15269	919 aa	Known RBP	11.62	□□□□□ -0.55
MEIS2-222	ENST00000561208	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	11.62	□□□□□ -0.55
MEIS2-222	ENST00000561208	METTL16	Q86W50	562 aa	Known RBP	11.62	□□□□□ -0.55
MEIS2-222	ENST00000561208	RASGRP4	Q8TDF6	673 aa		11.62	□□□□□ -0.55
MEIS2-222	ENST00000561208	SMCR8	Q8TEV9	937 aa	Predicted RBP	11.62	□□□□□ -0.55
MEIS2-222	ENST00000561208	ACSBG1	Q96GR2	724 aa		11.62	□□□□□ -0.55
MEIS2-222	ENST00000561208	TCHP	Q9BT92	498 aa		11.62	□□□□□ -0.55
MEIS2-222	ENST00000561208	MLH3	Q9UHC1	1453 aa		11.62	□□□□□ -0.55
MEIS2-222	ENST00000561208	KIF28P	B7ZC32	967 aa		11.62	□□□□□ -0.55
MEIS2-222	ENST00000561208	KLRF2	D3W0D1	207 aa		11.62	□□□□□ -0.55
MEIS2-222	ENST00000561208	TXNDC9	O14530	226 aa		11.62	□□□□□ -0.55
MEIS2-222	ENST00000561208	VPS41	P49754	854 aa		11.62	□□□□□ -0.55
MEIS2-222	ENST00000561208	TBC1D1	Q86TI0	1168 aa	Predicted RBP	11.62	□□□□□ -0.55
MEIS2-222	ENST00000561208	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	11.62	□□□□□ -0.55
MEIS2-222	ENST00000561208	LARP4B	Q92615	738 aa	Known RBP	11.62	□□□□□ -0.55
MEIS2-222	ENST00000561208	ZBTB21	Q9ULJ3	1066 aa		11.62	□□□□□ -0.55
MEIS2-222	ENST00000561208	CLTCL1	P53675	1640 aa		11.62	□□□□□ -0.55
MEIS2-222	ENST00000561208	ARHGEF35	A5YM69	484 aa		11.62	□□□□□ -0.55
MEIS2-222	ENST00000561208		I3L4J1	428 aa		11.62	□□□□□ -0.55
MEIS2-222	ENST00000561208	IGKV5-2	P06315	115 aa		11.62	□□□□□ -0.55
MEIS2-222	ENST00000561208	BIRC3	Q13489	604 aa		11.62	□□□□□ -0.55
MEIS2-222	ENST00000561208	MB21D2	Q8IYB1	491 aa	Predicted RBP	11.62	□□□□□ -0.55
MEIS2-222	ENST00000561208	GREM2	Q9H772	168 aa		11.62	□□□□□ -0.55
MEIS2-222	ENST00000561208	PCDHA4	Q9UN74	947 aa		11.62	□□□□□ -0.55
MEIS2-222	ENST00000561208	TMEM2	Q9UHN6	1383 aa		11.62	□□□□□ -0.55
MEIS2-222	ENST00000561208	TTC26	A0AVF1	554 aa		11.62	□□□□□ -0.55
MEIS2-222	ENST00000561208	HSPA1L	P34931	641 aa		11.62	□□□□□ -0.55
MEIS2-222	ENST00000561208	RFC4	P35249	363 aa		11.62	□□□□□ -0.55
MEIS2-222	ENST00000561208	ACTN3	Q08043	901 aa	Predicted RBP	11.62	□□□□□ -0.55
MEIS2-222	ENST00000561208	CUL4B	Q13620	913 aa		11.62	□□□□□ -0.55
MEIS2-222	ENST00000561208	ZKSCAN8	Q15776	578 aa	Predicted RBP	11.62	□□□□□ -0.55
MEIS2-222	ENST00000561208	RASIP1	Q5U651	963 aa		11.62	□□□□□ -0.55
MEIS2-222	ENST00000561208	STOX1	Q6ZVD7	989 aa		11.62	□□□□□ -0.55
MEIS2-222	ENST00000561208	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
MEIS2-222	ENST00000561208	TYW1	Q9NV66	732 aa	Known RBP	11.62	□□□□□ -0.55
MEIS2-222	ENST00000561208	SERPING1	P05155	500 aa		11.61	□□□□□ -0.55
MEIS2-222	ENST00000561208	ARL6IP4	Q66PJ3	421 aa	Known RBP	11.61	□□□□□ -0.55
MEIS2-222	ENST00000561208	TC2N	Q8N9U0	490 aa		11.61	□□□□□ -0.55
MEIS2-222	ENST00000561208	RAB3IL1	Q8TBN0	382 aa		11.61	□□□□□ -0.55
MEIS2-222	ENST00000561208	NEK9	Q8TD19	979 aa		11.61	□□□□□ -0.55
MEIS2-222	ENST00000561208	CCHCR1	Q8TD31	782 aa		11.61	□□□□□ -0.55
MEIS2-222	ENST00000561208	GRK7	Q8WTQ7	553 aa		11.61	□□□□□ -0.55
MEIS2-222	ENST00000561208	ZNF622	Q969S3	477 aa	Known RBP eCLIP	11.61	□□□□□ -0.55
MEIS2-222	ENST00000561208	TRIM6	Q9C030	488 aa	Predicted RBP	11.61	□□□□□ -0.55
MEIS2-222	ENST00000561208	TRIM4	Q9C037	500 aa		11.61	□□□□□ -0.55
MEIS2-222	ENST00000561208	ATP8A2	Q9NTI2	1148 aa		11.61	□□□□□ -0.55
MEIS2-222	ENST00000561208	ANAPC4	Q9UJX5	808 aa		11.61	□□□□□ -0.55
MEIS2-222	ENST00000561208	UST	Q9Y2C2	406 aa		11.61	□□□□□ -0.55
MEIS2-222	ENST00000561208	WDR19	Q8NEZ3	1342 aa		11.61	□□□□□ -0.55
MEIS2-222	ENST00000561208	STK36	Q9NRP7	1315 aa		11.61	□□□□□ -0.55
MEIS2-222	ENST00000561208	KIF3C	O14782	793 aa		11.61	□□□□□ -0.55
MEIS2-222	ENST00000561208	ADAMTS2	O95450	1211 aa		11.61	□□□□□ -0.55
MEIS2-222	ENST00000561208	ATP1A1	P05023	1023 aa	Known RBP	11.61	□□□□□ -0.55
MEIS2-222	ENST00000561208	SH3BGR	P55822	239 aa	Predicted RBP	11.61	□□□□□ -0.55
MEIS2-222	ENST00000561208	TAF11	Q15544	211 aa		11.61	□□□□□ -0.55
MEIS2-222	ENST00000561208	TFCP2L1	Q9NZI6	479 aa		11.61	□□□□□ -0.55
MEIS2-222	ENST00000561208	NOP53	Q9NZM5	478 aa	Known RBP	11.61	□□□□□ -0.55
MEIS2-222	ENST00000561208	TUBE1	Q9UJT0	475 aa		11.61	□□□□□ -0.55
MEIS2-222	ENST00000561208	KAT6B	Q8WYB5	2073 aa		11.61	□□□□□ -0.55
MEIS2-222	ENST00000561208	GMNC	A6NCL1	334 aa		11.61	□□□□□ -0.55
MEIS2-222	ENST00000561208	IL9R	Q01113	521 aa		11.61	□□□□□ -0.55
MEIS2-222	ENST00000561208	EXOSC10	Q01780	885 aa	Known RBP	11.61	□□□□□ -0.55
MEIS2-222	ENST00000561208	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	11.61	□□□□□ -0.55
MEIS2-222	ENST00000561208	NLRP14	Q86W24	1093 aa		11.61	□□□□□ -0.55
MEIS2-222	ENST00000561208	RDH13	Q8NBN7	331 aa		11.61	□□□□□ -0.55
MEIS2-222	ENST00000561208	HNRNPLL	Q8WVV9	542 aa	Known RBP	11.61	□□□□□ -0.55
MEIS2-222	ENST00000561208	FNBP1	Q96RU3	617 aa		11.61	□□□□□ -0.55
MEIS2-222	ENST00000561208	FMO2	Q99518	471 aa		11.61	□□□□□ -0.55
MEIS2-222	ENST00000561208	TPX2	Q9ULW0	747 aa	Known RBP	11.61	□□□□□ -0.55
MEIS2-222	ENST00000561208	TET3	O43151	1660 aa		11.61	□□□□□ -0.55
MEIS2-222	ENST00000561208		A0A1B0GTH6	734 aa		11.61	□□□□□ -0.55
MEIS2-222	ENST00000561208	ERVV-2	B6SEH9	535 aa		11.61	□□□□□ -0.55
MEIS2-222	ENST00000561208	PRKAB2	O43741	272 aa		11.61	□□□□□ -0.55
MEIS2-222	ENST00000561208	SEPT6	Q14141	434 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms