RNA–Protein interactions for RNA: ENST00000560987.5

SNRPA1-214, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-214ENST00000560987 GOLGA8BA8MQT2 603 aa10.45□□□□□ -0.74
SNRPA1-214ENST00000560987 B4DLN1 442 aa10.45□□□□□ -0.74
SNRPA1-214ENST00000560987 MSCO60682 206 aa10.45□□□□□ -0.74
SNRPA1-214ENST00000560987 PLEKHA8P1O95397 391 aa10.45□□□□□ -0.74
SNRPA1-214ENST00000560987 MRPL12P52815 198 aaKnown RBP10.45□□□□□ -0.74
SNRPA1-214ENST00000560987 RPS6P62753 249 aaKnown RBP10.45□□□□□ -0.74
SNRPA1-214ENST00000560987 APOA5Q6Q788 366 aa10.45□□□□□ -0.74
SNRPA1-214ENST00000560987 EEPD1Q7L9B9 569 aa10.45□□□□□ -0.74
SNRPA1-214ENST00000560987 ZNF467Q7Z7K2 595 aaPredicted RBP10.45□□□□□ -0.74
SNRPA1-214ENST00000560987 SGMS1Q86VZ5 419 aa10.45□□□□□ -0.74
SNRPA1-214ENST00000560987 SRBD1Q8N5C6 995 aaKnown RBP10.45□□□□□ -0.74
SNRPA1-214ENST00000560987 MSL3Q8N5Y2 521 aaKnown RBP10.45□□□□□ -0.74
SNRPA1-214ENST00000560987 TRPV1Q8NER1 839 aa10.45□□□□□ -0.74
SNRPA1-214ENST00000560987 TBC1D5Q92609 795 aa10.45□□□□□ -0.74
SNRPA1-214ENST00000560987 PURBQ96QR8 312 aaKnown RBP10.45□□□□□ -0.74
SNRPA1-214ENST00000560987 LARP6Q9BRS8 491 aaKnown RBP10.45□□□□□ -0.74
SNRPA1-214ENST00000560987 PDRG1Q9NUG6 133 aa10.45□□□□□ -0.74
SNRPA1-214ENST00000560987 RBM28Q9NW13 759 aaKnown RBP10.45□□□□□ -0.74
SNRPA1-214ENST00000560987 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.45□□□□□ -0.74
SNRPA1-214ENST00000560987 DDX20Q9UHI6 824 aaKnown RBP10.45□□□□□ -0.74
SNRPA1-214ENST00000560987 BRPF3Q9ULD4 1205 aa10.45□□□□□ -0.74
SNRPA1-214ENST00000560987 FAM184BQ9ULE4 1060 aa10.45□□□□□ -0.74
SNRPA1-214ENST00000560987 SMCHD1A6NHR9 2005 aa10.45□□□□□ -0.74
SNRPA1-214ENST00000560987 BAZ2BQ9UIF8 2168 aaKnown RBP10.44□□□□□ -0.74
SNRPA1-214ENST00000560987 CCDC196A0A1B0GTZ2 297 aa10.44□□□□□ -0.74
SNRPA1-214ENST00000560987 hCG_1642624A0A1W2PR95 340 aa10.44□□□□□ -0.74
SNRPA1-214ENST00000560987 SEPT4O43236 478 aa10.44□□□□□ -0.74
SNRPA1-214ENST00000560987 CYTH3O43739 400 aa10.44□□□□□ -0.74
SNRPA1-214ENST00000560987 FARP2O94887 1054 aaPredicted RBP10.44□□□□□ -0.74
SNRPA1-214ENST00000560987 SEC24BO95487 1268 aa10.44□□□□□ -0.74
SNRPA1-214ENST00000560987 SNAI1O95863 264 aaPredicted RBP10.44□□□□□ -0.74
SNRPA1-214ENST00000560987 CYBAP13498 195 aa10.44□□□□□ -0.74
SNRPA1-214ENST00000560987 SMARCA1P28370 1054 aa10.44□□□□□ -0.74
SNRPA1-214ENST00000560987 PDE4DQ08499 809 aa10.44□□□□□ -0.74
SNRPA1-214ENST00000560987 ACVR2BQ13705 512 aa10.44□□□□□ -0.74
SNRPA1-214ENST00000560987 RTN1Q16799 776 aa10.44□□□□□ -0.74
SNRPA1-214ENST00000560987 ARMCX2Q7L311 632 aa10.44□□□□□ -0.74
SNRPA1-214ENST00000560987 FAM133AQ8N9E0 248 aa10.44□□□□□ -0.74
SNRPA1-214ENST00000560987 ARRDC4Q8NCT1 418 aa10.44□□□□□ -0.74
SNRPA1-214ENST00000560987 RGS22Q8NE09 1264 aa10.44□□□□□ -0.74
SNRPA1-214ENST00000560987 PAWRQ96IZ0 340 aaKnown RBP10.44□□□□□ -0.74
SNRPA1-214ENST00000560987 UPF3BQ9BZI7 483 aaKnown RBP10.44□□□□□ -0.74
SNRPA1-214ENST00000560987 ZSWIM6Q9HCJ5 1215 aa10.44□□□□□ -0.74
SNRPA1-214ENST00000560987 NR2E3Q9Y5X4 410 aa10.44□□□□□ -0.74
SNRPA1-214ENST00000560987 KIAA0100Q14667 2235 aaKnown RBP10.43□□□□□ -0.74
SNRPA1-214ENST00000560987 MYH6P13533 1939 aa10.43□□□□□ -0.74
SNRPA1-214ENST00000560987 PLXNA1Q9UIW2 1896 aa10.43□□□□□ -0.74
SNRPA1-214ENST00000560987 SYNGAP1Q96PV0 1343 aa10.43□□□□□ -0.74
SNRPA1-214ENST00000560987 PDE4DIPQ5VU43 2346 aa10.43□□□□□ -0.74
SNRPA1-214ENST00000560987 RARBP10826 455 aa10.43□□□□□ -0.74
SNRPA1-214ENST00000560987 METAP2P50579 478 aaKnown RBP eCLIP10.43□□□□□ -0.74
SNRPA1-214ENST00000560987 CCT2P78371 535 aaKnown RBP10.43□□□□□ -0.74
SNRPA1-214ENST00000560987 AKAP17AQ02040 695 aaKnown RBP10.43□□□□□ -0.74
SNRPA1-214ENST00000560987 HABP4Q5JVS0 413 aaKnown RBP10.43□□□□□ -0.74
SNRPA1-214ENST00000560987 ARHGEF16Q5VV41 709 aa10.43□□□□□ -0.74
SNRPA1-214ENST00000560987 MAMDC4Q6UXC1 1216 aa10.43□□□□□ -0.74
SNRPA1-214ENST00000560987 SLC30A10Q6XR72 485 aa10.43□□□□□ -0.74
SNRPA1-214ENST00000560987 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.43□□□□□ -0.74
SNRPA1-214ENST00000560987 NECAB2Q7Z6G3 386 aa10.43□□□□□ -0.74
SNRPA1-214ENST00000560987 CUL5Q93034 780 aa10.43□□□□□ -0.74
SNRPA1-214ENST00000560987 MTMR8Q96EF0 704 aa10.43□□□□□ -0.74
SNRPA1-214ENST00000560987 TAAR1Q96RJ0 339 aa10.43□□□□□ -0.74
SNRPA1-214ENST00000560987 SPZ1Q9BXG8 430 aa10.43□□□□□ -0.74
SNRPA1-214ENST00000560987 TM6SF1Q9BZW5 370 aa10.43□□□□□ -0.74
SNRPA1-214ENST00000560987 CRISPLD2Q9H0B8 497 aa10.43□□□□□ -0.74
SNRPA1-214ENST00000560987 ABHD16BQ9H3Z7 469 aa10.43□□□□□ -0.74
SNRPA1-214ENST00000560987 NRBP1Q9UHY1 535 aa10.43□□□□□ -0.74
SNRPA1-214ENST00000560987 DDX49Q9Y6V7 483 aaKnown RBP10.43□□□□□ -0.74
SNRPA1-214ENST00000560987 V9GY48 417 aaPredicted RBP10.43□□□□□ -0.74
SNRPA1-214ENST00000560987 KBTBD13C9JR72 458 aa10.42□□□□□ -0.74
SNRPA1-214ENST00000560987 GCOM1H8Y6P7 765 aaPredicted RBP10.42□□□□□ -0.74
SNRPA1-214ENST00000560987 PPP1R11O60927 126 aaPredicted RBP10.42□□□□□ -0.74
SNRPA1-214ENST00000560987 POLR2MP0CAP2 368 aa10.42□□□□□ -0.74
SNRPA1-214ENST00000560987 ZNF865P0CJ78 1059 aaPredicted RBP10.42□□□□□ -0.74
SNRPA1-214ENST00000560987 C7P10643 843 aa10.42□□□□□ -0.74
SNRPA1-214ENST00000560987 AKR1A1P14550 325 aa10.42□□□□□ -0.74
SNRPA1-214ENST00000560987 HOXA13P31271 388 aaPredicted RBP10.42□□□□□ -0.74
SNRPA1-214ENST00000560987 ADD1P35611 737 aaKnown RBP10.42□□□□□ -0.74
SNRPA1-214ENST00000560987 ALDH5A1P51649 535 aaPredicted RBP10.42□□□□□ -0.74
SNRPA1-214ENST00000560987 TNFAIP2Q03169 654 aa10.42□□□□□ -0.74
SNRPA1-214ENST00000560987 STK3Q13188 491 aa10.42□□□□□ -0.74
SNRPA1-214ENST00000560987 PPP2R5BQ15173 497 aa10.42□□□□□ -0.74
SNRPA1-214ENST00000560987 SLC35G1Q2M3R5 365 aa10.42□□□□□ -0.74
SNRPA1-214ENST00000560987 CCDC144BQ3MJ40 725 aa10.42□□□□□ -0.74
SNRPA1-214ENST00000560987 GJC2Q5T442 439 aaPredicted RBP10.42□□□□□ -0.74
SNRPA1-214ENST00000560987 TMTC3Q6ZXV5 915 aa10.42□□□□□ -0.74
SNRPA1-214ENST00000560987 FCHSD1Q86WN1 690 aa10.42□□□□□ -0.74
SNRPA1-214ENST00000560987 ANKLE1Q8NAG6 615 aa10.42□□□□□ -0.74
SNRPA1-214ENST00000560987 DNERQ8NFT8 737 aa10.42□□□□□ -0.74
SNRPA1-214ENST00000560987 SMARCC2Q8TAQ2 1214 aa10.42□□□□□ -0.74
SNRPA1-214ENST00000560987 NSUN6Q8TEA1 469 aaKnown RBP10.42□□□□□ -0.74
SNRPA1-214ENST00000560987 SLC39A7Q92504 469 aa10.42□□□□□ -0.74
SNRPA1-214ENST00000560987 VTI1AQ96AJ9 217 aa10.42□□□□□ -0.74
SNRPA1-214ENST00000560987 SHISA4Q96DD7 197 aa10.42□□□□□ -0.74
SNRPA1-214ENST00000560987 RMDN3Q96TC7 470 aa10.42□□□□□ -0.74
SNRPA1-214ENST00000560987 SENP6Q9GZR1 1112 aaPredicted RBP10.42□□□□□ -0.74
SNRPA1-214ENST00000560987 SPC25Q9HBM1 224 aa10.42□□□□□ -0.74
SNRPA1-214ENST00000560987 XPNPEP3Q9NQH7 507 aa10.42□□□□□ -0.74
SNRPA1-214ENST00000560987 OGDHLQ9ULD0 1010 aa10.42□□□□□ -0.74
SNRPA1-214ENST00000560987 PGK1P00558 417 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms