RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 MUM1L1Q5H9M0 696 aa22■■□□□ 1.11
TPM1-226ENST00000560959 EEPD1Q7L9B9 569 aa22■■□□□ 1.11
TPM1-226ENST00000560959 GPATCH3Q96I76 525 aa22■■□□□ 1.11
TPM1-226ENST00000560959 TRMT13Q9NUP7 481 aaKnown RBP22■■□□□ 1.11
TPM1-226ENST00000560959 ADD3Q9UEY8 706 aaKnown RBP22■■□□□ 1.11
TPM1-226ENST00000560959 GBF1Q92538 1859 aa21.99■■□□□ 1.11
TPM1-226ENST00000560959 PITPNM1O00562 1244 aa21.99■■□□□ 1.11
TPM1-226ENST00000560959 PTGS1P23219 599 aa21.99■■□□□ 1.11
TPM1-226ENST00000560959 KCNQ1P51787 676 aa21.99■■□□□ 1.11
TPM1-226ENST00000560959 TMEM63BQ5T3F8 832 aa21.99■■□□□ 1.11
TPM1-226ENST00000560959 PRR12Q9ULL5 1215 aa21.99■■□□□ 1.11
TPM1-226ENST00000560959 ISY1Q9ULR0 285 aaKnown RBP21.99■■□□□ 1.11
TPM1-226ENST00000560959 KIF28PB7ZC32 967 aa21.98■■□□□ 1.11
TPM1-226ENST00000560959 TLL1O43897 1013 aa21.98■■□□□ 1.11
TPM1-226ENST00000560959 SMARCA5O60264 1052 aaPredicted RBP21.98■■□□□ 1.11
TPM1-226ENST00000560959 ICAM1P05362 532 aa21.98■■□□□ 1.11
TPM1-226ENST00000560959 CYP2C9P11712 490 aa21.98■■□□□ 1.11
TPM1-226ENST00000560959 NFRKBQ6P4R8 1299 aa21.98■■□□□ 1.11
TPM1-226ENST00000560959 MTG1Q9BT17 334 aaPredicted RBP21.98■■□□□ 1.11
TPM1-226ENST00000560959 WDR11Q9BZH6 1224 aa21.98■■□□□ 1.11
TPM1-226ENST00000560959 GPHNQ9NQX3 736 aaPredicted RBP21.98■■□□□ 1.11
TPM1-226ENST00000560959 M0R2C6 588 aa21.97■■□□□ 1.11
TPM1-226ENST00000560959 KPNA6O60684 536 aa21.97■■□□□ 1.11
TPM1-226ENST00000560959 PTPN11Q06124 597 aaPredicted RBP21.97■■□□□ 1.11
TPM1-226ENST00000560959 PPARAQ07869 468 aa21.97■■□□□ 1.11
TPM1-226ENST00000560959 BRDTQ58F21 947 aaPredicted RBP21.97■■□□□ 1.11
TPM1-226ENST00000560959 NSMFQ6X4W1 530 aa21.97■■□□□ 1.11
TPM1-226ENST00000560959 KCTD1Q719H9 257 aa21.97■■□□□ 1.11
TPM1-226ENST00000560959 DEFB128Q7Z7B8 93 aa21.97■■□□□ 1.11
TPM1-226ENST00000560959 CCPG1Q9ULG6 757 aa21.97■■□□□ 1.11
TPM1-226ENST00000560959 DDX49Q9Y6V7 483 aaKnown RBP21.97■■□□□ 1.11
TPM1-226ENST00000560959 RFXAPO00287 272 aa21.96■■□□□ 1.11
TPM1-226ENST00000560959 NKRFO15226 690 aaKnown RBP eCLIP21.96■■□□□ 1.11
TPM1-226ENST00000560959 IQCF3P0C7M6 154 aa21.96■■□□□ 1.11
TPM1-226ENST00000560959 NOVP48745 357 aa21.96■■□□□ 1.11
TPM1-226ENST00000560959 TAP1Q03518 808 aa21.96■■□□□ 1.11
TPM1-226ENST00000560959 RETREG2Q8NC44 543 aa21.96■■□□□ 1.11
TPM1-226ENST00000560959 HLA-CQ95604 372 aa21.96■■□□□ 1.11
TPM1-226ENST00000560959 LRFN3Q9BTN0 628 aa21.96■■□□□ 1.11
TPM1-226ENST00000560959 NAPBQ9H115 298 aa21.96■■□□□ 1.11
TPM1-226ENST00000560959 STX8Q9UNK0 236 aa21.96■■□□□ 1.11
TPM1-226ENST00000560959 HCN4Q9Y3Q4 1203 aa21.96■■□□□ 1.11
TPM1-226ENST00000560959 BAIAP3O94812 1187 aa21.95■■□□□ 1.1
TPM1-226ENST00000560959 ALDH5A1P51649 535 aaPredicted RBP21.95■■□□□ 1.1
TPM1-226ENST00000560959 BAATQ14032 418 aaPredicted RBP21.95■■□□□ 1.1
TPM1-226ENST00000560959 HERC6Q8IVU3 1022 aa21.95■■□□□ 1.1
TPM1-226ENST00000560959 RANBP17Q9H2T7 1088 aaKnown RBP21.95■■□□□ 1.1
TPM1-226ENST00000560959 EPHX3Q9H6B9 360 aa21.95■■□□□ 1.1
TPM1-226ENST00000560959 IL17RBQ9NRM6 502 aa21.95■■□□□ 1.1
TPM1-226ENST00000560959 PNMA2Q9UL42 364 aa21.95■■□□□ 1.1
TPM1-226ENST00000560959 TCF20Q9UGU0 1960 aaKnown RBP21.95■■□□□ 1.1
TPM1-226ENST00000560959 PRRC2BQ5JSZ5 2229 aaKnown RBP21.95■■□□□ 1.1
TPM1-226ENST00000560959 LRRC37A2A6NM11 1700 aa21.94■■□□□ 1.1
TPM1-226ENST00000560959 EPOPA6NHQ4 379 aa21.94■■□□□ 1.1
TPM1-226ENST00000560959 MYL3P08590 195 aa21.94■■□□□ 1.1
TPM1-226ENST00000560959 BFSP2Q13515 415 aa21.94■■□□□ 1.1
TPM1-226ENST00000560959 NBPF20Q3BBV1 942 aa21.94■■□□□ 1.1
TPM1-226ENST00000560959 BTNL9Q6UXG8 535 aa21.94■■□□□ 1.1
TPM1-226ENST00000560959 PURBQ96QR8 312 aaKnown RBP21.94■■□□□ 1.1
TPM1-226ENST00000560959 LMCD1Q9NZU5 365 aa21.94■■□□□ 1.1
TPM1-226ENST00000560959 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.94■■□□□ 1.1
TPM1-226ENST00000560959 RAD50Q92878 1312 aa21.94■■□□□ 1.1
TPM1-226ENST00000560959 A6NJR5 290 aa21.93■■□□□ 1.1
TPM1-226ENST00000560959 TSPY2A6NKD2 308 aa21.93■■□□□ 1.1
TPM1-226ENST00000560959 GPR37L1O60883 481 aa21.93■■□□□ 1.1
TPM1-226ENST00000560959 SNAP25P60880 206 aa21.93■■□□□ 1.1
TPM1-226ENST00000560959 TMEM31Q5JXX7 168 aa21.93■■□□□ 1.1
TPM1-226ENST00000560959 OR6J1Q8NGC5 347 aa21.93■■□□□ 1.1
TPM1-226ENST00000560959 DCAF4Q8WV16 495 aa21.93■■□□□ 1.1
TPM1-226ENST00000560959 ARNTL2Q8WYA1 636 aa21.93■■□□□ 1.1
TPM1-226ENST00000560959 DCTPP1Q9H773 170 aa21.93■■□□□ 1.1
TPM1-226ENST00000560959 CERS4Q9HA82 394 aa21.93■■□□□ 1.1
TPM1-226ENST00000560959 MPHOSPH6Q99547 160 aaKnown RBP21.92■■□□□ 1.1
TPM1-226ENST00000560959 FTOQ9C0B1 505 aaKnown RBP eCLIP21.92■■□□□ 1.1
TPM1-226ENST00000560959 GRB10Q13322 594 aa21.91■■□□□ 1.1
TPM1-226ENST00000560959 FAM47CQ5HY64 1035 aa21.91■■□□□ 1.1
TPM1-226ENST00000560959 SEC62Q99442 399 aaKnown RBP21.91■■□□□ 1.1
TPM1-226ENST00000560959 TTC41PQ6P2S7 1318 aa21.9■■□□□ 1.1
TPM1-226ENST00000560959 LPXNO60711 386 aa21.9■■□□□ 1.1
TPM1-226ENST00000560959 PARNO95453 639 aaKnown RBP21.9■■□□□ 1.1
TPM1-226ENST00000560959 EDNRBP24530 442 aa21.9■■□□□ 1.1
TPM1-226ENST00000560959 PPP2R5BQ15173 497 aa21.9■■□□□ 1.1
TPM1-226ENST00000560959 ZMYM1Q5SVZ6 1142 aa21.9■■□□□ 1.1
TPM1-226ENST00000560959 KRT40Q6A162 431 aa21.9■■□□□ 1.1
TPM1-226ENST00000560959 DNERQ8NFT8 737 aa21.9■■□□□ 1.1
TPM1-226ENST00000560959 CAGE1Q8TC20 777 aa21.9■■□□□ 1.1
TPM1-226ENST00000560959 SCFD2Q8WU76 684 aa21.9■■□□□ 1.1
TPM1-226ENST00000560959 ANAPC4Q9UJX5 808 aa21.9■■□□□ 1.1
TPM1-226ENST00000560959 SCN10AQ9Y5Y9 1956 aa21.89■■□□□ 1.09
TPM1-226ENST00000560959 PTPDC1A2A3K4 754 aa21.89■■□□□ 1.09
TPM1-226ENST00000560959 B4DLN1 442 aa21.89■■□□□ 1.09
TPM1-226ENST00000560959 NFIBO00712 420 aa21.89■■□□□ 1.09
TPM1-226ENST00000560959 ARHGEF15O94989 841 aa21.89■■□□□ 1.09
TPM1-226ENST00000560959 FGRP09769 529 aa21.89■■□□□ 1.09
TPM1-226ENST00000560959 MRPL12P52815 198 aaKnown RBP21.89■■□□□ 1.09
TPM1-226ENST00000560959 CCDC155Q8N6L0 562 aa21.89■■□□□ 1.09
TPM1-226ENST00000560959 CHMP4CQ96CF2 233 aa21.89■■□□□ 1.09
TPM1-226ENST00000560959 NMT2O60551 498 aa21.88■■□□□ 1.09
TPM1-226ENST00000560959 KCNJ6P48051 423 aa21.88■■□□□ 1.09
TPM1-226ENST00000560959 PDE4DQ08499 809 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms