RNA–Protein interactions for RNA: ENST00000560045.1

IGKV2D-40-202, Transcript of immunoglobulin kappa variable 2D-40, humanhuman

APPRIS ALT2 BASIC

Gene IGKV2D-40, Length 312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-40-202ENST00000560045 PALM3A6NDB9 673 aaPredicted RBP12.73□□□□□ -0.37
IGKV2D-40-202ENST00000560045 B4DLN1 442 aa12.73□□□□□ -0.37
IGKV2D-40-202ENST00000560045 NKRFO15226 690 aaKnown RBP eCLIP12.73□□□□□ -0.37
IGKV2D-40-202ENST00000560045 ASGR1P07306 291 aa12.73□□□□□ -0.37
IGKV2D-40-202ENST00000560045 CDK7P50613 346 aa12.73□□□□□ -0.37
IGKV2D-40-202ENST00000560045 MRPL12P52815 198 aaKnown RBP12.73□□□□□ -0.37
IGKV2D-40-202ENST00000560045 TROAPQ12815 778 aa12.73□□□□□ -0.37
IGKV2D-40-202ENST00000560045 TRAF1Q13077 416 aa12.73□□□□□ -0.37
IGKV2D-40-202ENST00000560045 GRM4Q14833 912 aa12.73□□□□□ -0.37
IGKV2D-40-202ENST00000560045 KCNA10Q16322 511 aa12.73□□□□□ -0.37
IGKV2D-40-202ENST00000560045 QRICH1Q2TAL8 776 aa12.73□□□□□ -0.37
IGKV2D-40-202ENST00000560045 DUSP28Q4G0W2 176 aa12.73□□□□□ -0.37
IGKV2D-40-202ENST00000560045 STOX1Q6ZVD7 989 aa12.73□□□□□ -0.37
IGKV2D-40-202ENST00000560045 MCF2L2Q86YR7 1114 aa12.73□□□□□ -0.37
IGKV2D-40-202ENST00000560045 FBXO16Q8IX29 292 aaPredicted RBP12.73□□□□□ -0.37
IGKV2D-40-202ENST00000560045 UBE2OQ9C0C9 1292 aaKnown RBP12.73□□□□□ -0.37
IGKV2D-40-202ENST00000560045 LSG1Q9H089 658 aaKnown RBP12.73□□□□□ -0.37
IGKV2D-40-202ENST00000560045 JMJD4Q9H9V9 463 aa12.73□□□□□ -0.37
IGKV2D-40-202ENST00000560045 MAD2L2Q9UI95 211 aa12.73□□□□□ -0.37
IGKV2D-40-202ENST00000560045 TANC1Q9C0D5 1861 aa12.73□□□□□ -0.37
IGKV2D-40-202ENST00000560045 A0A0U1RQG5 324 aaPredicted RBP12.72□□□□□ -0.37
IGKV2D-40-202ENST00000560045 MYCNP04198 464 aaPredicted RBP12.72□□□□□ -0.37
IGKV2D-40-202ENST00000560045 SMPD1P17405 629 aa12.72□□□□□ -0.37
IGKV2D-40-202ENST00000560045 ANTXR2P58335 489 aa12.72□□□□□ -0.37
IGKV2D-40-202ENST00000560045 TLE2Q04725 743 aa12.72□□□□□ -0.37
IGKV2D-40-202ENST00000560045 WTAPQ15007 396 aa12.72□□□□□ -0.37
IGKV2D-40-202ENST00000560045 FBXO11Q86XK2 927 aa12.72□□□□□ -0.37
IGKV2D-40-202ENST00000560045 SLC43A3Q8NBI5 491 aa12.72□□□□□ -0.37
IGKV2D-40-202ENST00000560045 FERMT2Q96AC1 680 aa12.72□□□□□ -0.37
IGKV2D-40-202ENST00000560045 UBA5Q9GZZ9 404 aa12.72□□□□□ -0.37
IGKV2D-40-202ENST00000560045 RIOX1Q9H6W3 641 aa12.72□□□□□ -0.37
IGKV2D-40-202ENST00000560045 TBX21Q9UL17 535 aa12.72□□□□□ -0.37
IGKV2D-40-202ENST00000560045 MRPL11Q9Y3B7 192 aaKnown RBP12.72□□□□□ -0.37
IGKV2D-40-202ENST00000560045 TAF6LQ9Y6J9 622 aa12.72□□□□□ -0.37
IGKV2D-40-202ENST00000560045 KLRF2D3W0D1 207 aa12.71□□□□□ -0.37
IGKV2D-40-202ENST00000560045 ARVCFO00192 962 aa12.71□□□□□ -0.37
IGKV2D-40-202ENST00000560045 SOX1O00570 391 aaPredicted RBP12.71□□□□□ -0.37
IGKV2D-40-202ENST00000560045 IFIT3O14879 490 aaKnown RBP12.71□□□□□ -0.37
IGKV2D-40-202ENST00000560045 ZBTB5O15062 677 aa12.71□□□□□ -0.37
IGKV2D-40-202ENST00000560045 ZEB2O60315 1214 aa12.71□□□□□ -0.37
IGKV2D-40-202ENST00000560045 DDAH1O94760 285 aa12.71□□□□□ -0.37
IGKV2D-40-202ENST00000560045 HSD17B4P51659 736 aa12.71□□□□□ -0.37
IGKV2D-40-202ENST00000560045 MDM2Q00987 491 aaPredicted RBP12.71□□□□□ -0.37
IGKV2D-40-202ENST00000560045 FAAP100Q0VG06 881 aa12.71□□□□□ -0.37
IGKV2D-40-202ENST00000560045 NECTIN1Q15223 517 aa12.71□□□□□ -0.37
IGKV2D-40-202ENST00000560045 FSCN1Q16658 493 aaKnown RBP12.71□□□□□ -0.37
IGKV2D-40-202ENST00000560045 USH1GQ495M9 461 aa12.71□□□□□ -0.37
IGKV2D-40-202ENST00000560045 GNASQ5JWF2 1037 aa12.71□□□□□ -0.37
IGKV2D-40-202ENST00000560045 KIAA1211Q6ZU35 1233 aa12.71□□□□□ -0.37
IGKV2D-40-202ENST00000560045 FAM126BQ8IXS8 530 aa12.71□□□□□ -0.37
IGKV2D-40-202ENST00000560045 STAG2Q8N3U4 1231 aa12.71□□□□□ -0.37
IGKV2D-40-202ENST00000560045 SYTL5Q8TDW5 730 aaPredicted RBP12.71□□□□□ -0.37
IGKV2D-40-202ENST00000560045 IGDCC4Q8TDY8 1250 aa12.71□□□□□ -0.37
IGKV2D-40-202ENST00000560045 SCFD2Q8WU76 684 aa12.71□□□□□ -0.37
IGKV2D-40-202ENST00000560045 TMEM87BQ96K49 555 aa12.71□□□□□ -0.37
IGKV2D-40-202ENST00000560045 PURBQ96QR8 312 aaKnown RBP12.71□□□□□ -0.37
IGKV2D-40-202ENST00000560045 IWS1Q96ST2 819 aa12.71□□□□□ -0.37
IGKV2D-40-202ENST00000560045 AMNQ9BXJ7 453 aa12.71□□□□□ -0.37
IGKV2D-40-202ENST00000560045 CPVLQ9H3G5 476 aa12.71□□□□□ -0.37
IGKV2D-40-202ENST00000560045 FRMPD4Q14CM0 1322 aa12.7□□□□□ -0.38
IGKV2D-40-202ENST00000560045 TRIM43BA6NCK2 446 aa12.7□□□□□ -0.38
IGKV2D-40-202ENST00000560045 DCDC2CA8MYV0 355 aa12.7□□□□□ -0.38
IGKV2D-40-202ENST00000560045 OPLAHO14841 1288 aa12.7□□□□□ -0.38
IGKV2D-40-202ENST00000560045 CALML3P27482 149 aa12.7□□□□□ -0.38
IGKV2D-40-202ENST00000560045 SMARCA1P28370 1054 aa12.7□□□□□ -0.38
IGKV2D-40-202ENST00000560045 PPP2R5BQ15173 497 aa12.7□□□□□ -0.38
IGKV2D-40-202ENST00000560045 SH3RF1Q7Z6J0 888 aa12.7□□□□□ -0.38
IGKV2D-40-202ENST00000560045 TRIM43Q96BQ3 446 aaPredicted RBP12.7□□□□□ -0.38
IGKV2D-40-202ENST00000560045 AP5M1Q9H0R1 490 aa12.7□□□□□ -0.38
IGKV2D-40-202ENST00000560045 PRDM5Q9NQX1 630 aaPredicted RBP12.7□□□□□ -0.38
IGKV2D-40-202ENST00000560045 PDGFCQ9NRA1 345 aa12.7□□□□□ -0.38
IGKV2D-40-202ENST00000560045 SLC27A2O14975 620 aa12.69□□□□□ -0.38
IGKV2D-40-202ENST00000560045 CYTH3O43739 400 aa12.69□□□□□ -0.38
IGKV2D-40-202ENST00000560045 PQBP1O60828 265 aaKnown RBP12.69□□□□□ -0.38
IGKV2D-40-202ENST00000560045 PPP1R11O60927 126 aaPredicted RBP12.69□□□□□ -0.38
IGKV2D-40-202ENST00000560045 CD4P01730 458 aa12.69□□□□□ -0.38
IGKV2D-40-202ENST00000560045 LIFRP42702 1097 aa12.69□□□□□ -0.38
IGKV2D-40-202ENST00000560045 CPT1AP50416 773 aa12.69□□□□□ -0.38
IGKV2D-40-202ENST00000560045 IRX5P78411 483 aaPredicted RBP12.69□□□□□ -0.38
IGKV2D-40-202ENST00000560045 PDE4DQ08499 809 aa12.69□□□□□ -0.38
IGKV2D-40-202ENST00000560045 SLC35G1Q2M3R5 365 aa12.69□□□□□ -0.38
IGKV2D-40-202ENST00000560045 TMTC2Q8N394 836 aa12.69□□□□□ -0.38
IGKV2D-40-202ENST00000560045 NSUN6Q8TEA1 469 aaKnown RBP12.69□□□□□ -0.38
IGKV2D-40-202ENST00000560045 SPZ1Q9BXG8 430 aa12.69□□□□□ -0.38
IGKV2D-40-202ENST00000560045 WDR11Q9BZH6 1224 aa12.69□□□□□ -0.38
IGKV2D-40-202ENST00000560045 LY9Q9HBG7 655 aa12.69□□□□□ -0.38
IGKV2D-40-202ENST00000560045 POLR3EQ9NVU0 708 aa12.69□□□□□ -0.38
IGKV2D-40-202ENST00000560045 COL20A1Q9P218 1284 aa12.69□□□□□ -0.38
IGKV2D-40-202ENST00000560045 SH2B2O14492 632 aaPredicted RBP12.68□□□□□ -0.38
IGKV2D-40-202ENST00000560045 TLR3O15455 904 aaKnown RBP12.68□□□□□ -0.38
IGKV2D-40-202ENST00000560045 DHX16O60231 1041 aaKnown RBP12.68□□□□□ -0.38
IGKV2D-40-202ENST00000560045 ITGB8P26012 769 aa12.68□□□□□ -0.38
IGKV2D-40-202ENST00000560045 KIF5BP33176 963 aa12.68□□□□□ -0.38
IGKV2D-40-202ENST00000560045 MCM5P33992 734 aa12.68□□□□□ -0.38
IGKV2D-40-202ENST00000560045 BEX3Q00994 111 aa12.68□□□□□ -0.38
IGKV2D-40-202ENST00000560045 TTLL4Q14679 1199 aa12.68□□□□□ -0.38
IGKV2D-40-202ENST00000560045 TSGA10IPQ3SY00 556 aa12.68□□□□□ -0.38
IGKV2D-40-202ENST00000560045 TMEM67Q5HYA8 995 aa12.68□□□□□ -0.38
IGKV2D-40-202ENST00000560045 CREB3L3Q68CJ9 461 aa12.68□□□□□ -0.38
IGKV2D-40-202ENST00000560045 FAM109BQ6ICB4 259 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms