RNA–Protein interactions for RNA: ENST00000559774.6

LRRC28-215, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-215ENST00000559774 FBXO18Q8NFZ0 1043 aa9.98□□□□□ -0.81
LRRC28-215ENST00000559774 PIBF1Q8WXW3 757 aa9.98□□□□□ -0.81
LRRC28-215ENST00000559774 USP6NLQ92738 828 aa9.98□□□□□ -0.81
LRRC28-215ENST00000559774 GPKOWQ92917 476 aaPredicted RBP eCLIP9.98□□□□□ -0.81
LRRC28-215ENST00000559774 DDX11Q96FC9 970 aa9.98□□□□□ -0.81
LRRC28-215ENST00000559774 C8orf76Q96K31 380 aa9.98□□□□□ -0.81
LRRC28-215ENST00000559774 MMP19Q99542 508 aa9.98□□□□□ -0.81
LRRC28-215ENST00000559774 MPHOSPH6Q99547 160 aaKnown RBP9.98□□□□□ -0.81
LRRC28-215ENST00000559774 PHF20Q9BVI0 1012 aa9.98□□□□□ -0.81
LRRC28-215ENST00000559774 BRMS1Q9HCU9 246 aa9.98□□□□□ -0.81
LRRC28-215ENST00000559774 A1CFQ9NQ94 594 aaKnown RBP9.98□□□□□ -0.81
LRRC28-215ENST00000559774 TSHZ2Q9NRE2 1034 aa9.98□□□□□ -0.81
LRRC28-215ENST00000559774 CYP39A1Q9NYL5 469 aa9.98□□□□□ -0.81
LRRC28-215ENST00000559774 ADD3Q9UEY8 706 aaKnown RBP9.98□□□□□ -0.81
LRRC28-215ENST00000559774 hCG_1642624A0A1W2PR95 340 aa9.97□□□□□ -0.81
LRRC28-215ENST00000559774 NFIBO00712 420 aa9.97□□□□□ -0.81
LRRC28-215ENST00000559774 MEIS2O14770 477 aa9.97□□□□□ -0.81
LRRC28-215ENST00000559774 OPLAHO14841 1288 aa9.97□□□□□ -0.81
LRRC28-215ENST00000559774 HSPA1AP0DMV8 641 aaKnown RBP9.97□□□□□ -0.81
LRRC28-215ENST00000559774 HSPA1BP0DMV9 641 aaKnown RBP9.97□□□□□ -0.81
LRRC28-215ENST00000559774 HSPA8P11142 646 aaKnown RBP9.97□□□□□ -0.81
LRRC28-215ENST00000559774 RGS2P41220 211 aa9.97□□□□□ -0.81
LRRC28-215ENST00000559774 NLRP5P59047 1200 aa9.97□□□□□ -0.81
LRRC28-215ENST00000559774 RPS6P62753 249 aaKnown RBP9.97□□□□□ -0.81
LRRC28-215ENST00000559774 MAP2K5Q13163 448 aa9.97□□□□□ -0.81
LRRC28-215ENST00000559774 IRF5Q13568 498 aa9.97□□□□□ -0.81
LRRC28-215ENST00000559774 SAFBQ15424 915 aaKnown RBP eCLIP9.97□□□□□ -0.81
LRRC28-215ENST00000559774 WDR78Q5VTH9 848 aa9.97□□□□□ -0.81
LRRC28-215ENST00000559774 TYW1BQ6NUM6 668 aa9.97□□□□□ -0.81
LRRC28-215ENST00000559774 XRRA1Q6P2D8 792 aa9.97□□□□□ -0.81
LRRC28-215ENST00000559774 FAM133AQ8N9E0 248 aa9.97□□□□□ -0.81
LRRC28-215ENST00000559774 TRIM47Q96LD4 638 aa9.97□□□□□ -0.81
LRRC28-215ENST00000559774 IWS1Q96ST2 819 aa9.97□□□□□ -0.81
LRRC28-215ENST00000559774 EHMT1Q9H9B1 1298 aa9.97□□□□□ -0.81
LRRC28-215ENST00000559774 PRDM10Q9NQV6 1147 aa9.97□□□□□ -0.81
LRRC28-215ENST00000559774 HOMER2Q9NSB8 354 aa9.97□□□□□ -0.81
LRRC28-215ENST00000559774 GJD2Q9UKL4 321 aa9.97□□□□□ -0.81
LRRC28-215ENST00000559774 PCDHA4Q9UN74 947 aa9.97□□□□□ -0.81
LRRC28-215ENST00000559774 RBM19Q9Y4C8 960 aaKnown RBP9.97□□□□□ -0.81
LRRC28-215ENST00000559774 ASB14A6NK59 587 aa9.96□□□□□ -0.82
LRRC28-215ENST00000559774 POTEB2H3BUK9 544 aa9.96□□□□□ -0.82
LRRC28-215ENST00000559774 FOXN1O15353 648 aa9.96□□□□□ -0.82
LRRC28-215ENST00000559774 PEX10O60683 326 aa9.96□□□□□ -0.82
LRRC28-215ENST00000559774 CFBP00751 764 aa9.96□□□□□ -0.82
LRRC28-215ENST00000559774 MMP1P03956 469 aa9.96□□□□□ -0.82
LRRC28-215ENST00000559774 ADORA2AP29274 412 aa9.96□□□□□ -0.82
LRRC28-215ENST00000559774 SLC4A3P48751 1232 aa9.96□□□□□ -0.82
LRRC28-215ENST00000559774 CLK2P49760 499 aaKnown RBP9.96□□□□□ -0.82
LRRC28-215ENST00000559774 BAATQ14032 418 aaPredicted RBP9.96□□□□□ -0.82
LRRC28-215ENST00000559774 PKN2Q16513 984 aaKnown RBP9.96□□□□□ -0.82
LRRC28-215ENST00000559774 ZNF792Q3KQV3 632 aa9.96□□□□□ -0.82
LRRC28-215ENST00000559774 LARP1BQ659C4 914 aaKnown RBP9.96□□□□□ -0.82
LRRC28-215ENST00000559774 OLFML2BQ68BL8 750 aa9.96□□□□□ -0.82
LRRC28-215ENST00000559774 MAMDC4Q6UXC1 1216 aa9.96□□□□□ -0.82
LRRC28-215ENST00000559774 NSMFQ6X4W1 530 aa9.96□□□□□ -0.82
LRRC28-215ENST00000559774 DPP9Q86TI2 863 aa9.96□□□□□ -0.82
LRRC28-215ENST00000559774 REXO1Q8N1G1 1221 aaKnown RBP9.96□□□□□ -0.82
LRRC28-215ENST00000559774 SYTL5Q8TDW5 730 aaPredicted RBP9.96□□□□□ -0.82
LRRC28-215ENST00000559774 PXYLP1Q8TE99 480 aa9.96□□□□□ -0.82
LRRC28-215ENST00000559774 NSUN6Q8TEA1 469 aaKnown RBP9.96□□□□□ -0.82
LRRC28-215ENST00000559774 APBA2Q99767 749 aa9.96□□□□□ -0.82
LRRC28-215ENST00000559774 FOXP1Q9H334 677 aaPredicted RBP9.96□□□□□ -0.82
LRRC28-215ENST00000559774 VPS54Q9P1Q0 977 aa9.96□□□□□ -0.82
LRRC28-215ENST00000559774 DAXXQ9UER7 740 aaPredicted RBP9.96□□□□□ -0.82
LRRC28-215ENST00000559774 SRRDQ9UH36 339 aa9.96□□□□□ -0.82
LRRC28-215ENST00000559774 NRBP1Q9UHY1 535 aa9.96□□□□□ -0.82
LRRC28-215ENST00000559774 SPDYE3A6NKU9 549 aa9.95□□□□□ -0.82
LRRC28-215ENST00000559774 M0R2N6 131 aa9.95□□□□□ -0.82
LRRC28-215ENST00000559774 STAM2O75886 525 aa9.95□□□□□ -0.82
LRRC28-215ENST00000559774 CTGFP29279 349 aa9.95□□□□□ -0.82
LRRC28-215ENST00000559774 KRT40Q6A162 431 aa9.95□□□□□ -0.82
LRRC28-215ENST00000559774 KRT25Q7Z3Z0 450 aa9.95□□□□□ -0.82
LRRC28-215ENST00000559774 BLIDQ8IZY5 108 aa9.95□□□□□ -0.82
LRRC28-215ENST00000559774 CD99L2Q8TCZ2 262 aa9.95□□□□□ -0.82
LRRC28-215ENST00000559774 MORC4Q8TE76 937 aa9.95□□□□□ -0.82
LRRC28-215ENST00000559774 AIFM3Q96NN9 605 aa9.95□□□□□ -0.82
LRRC28-215ENST00000559774 FRMPD4Q14CM0 1322 aa9.95□□□□□ -0.82
LRRC28-215ENST00000559774 ZNF236Q9UL36 1845 aa9.94□□□□□ -0.82
LRRC28-215ENST00000559774 RPTORQ8N122 1335 aa9.94□□□□□ -0.82
LRRC28-215ENST00000559774 SYNGAP1Q96PV0 1343 aa9.94□□□□□ -0.82
LRRC28-215ENST00000559774 H3BQV1 296 aa9.94□□□□□ -0.82
LRRC28-215ENST00000559774 COBLO75128 1261 aa9.94□□□□□ -0.82
LRRC28-215ENST00000559774 PPFIA3O75145 1194 aa9.94□□□□□ -0.82
LRRC28-215ENST00000559774 IGHA2P01877 340 aa9.94□□□□□ -0.82
LRRC28-215ENST00000559774 EDNRBP24530 442 aa9.94□□□□□ -0.82
LRRC28-215ENST00000559774 U2AF2P26368 475 aaKnown RBP eCLIP9.94□□□□□ -0.82
LRRC28-215ENST00000559774 KRT2P35908 639 aa9.94□□□□□ -0.82
LRRC28-215ENST00000559774 FLT3LGP49771 235 aa9.94□□□□□ -0.82
LRRC28-215ENST00000559774 NPY5RQ15761 445 aa9.94□□□□□ -0.82
LRRC28-215ENST00000559774 IFFO2Q5TF58 517 aa9.94□□□□□ -0.82
LRRC28-215ENST00000559774 USP17L6PQ6QN14 398 aa9.94□□□□□ -0.82
LRRC28-215ENST00000559774 OTOP1Q7RTM1 612 aa9.94□□□□□ -0.82
LRRC28-215ENST00000559774 CTU1Q7Z7A3 348 aaKnown RBP9.94□□□□□ -0.82
LRRC28-215ENST00000559774 TBC1D5Q92609 795 aa9.94□□□□□ -0.82
LRRC28-215ENST00000559774 SHISA4Q96DD7 197 aa9.94□□□□□ -0.82
LRRC28-215ENST00000559774 MAML3Q96JK9 1138 aa9.94□□□□□ -0.82
LRRC28-215ENST00000559774 RMDN3Q96TC7 470 aa9.94□□□□□ -0.82
LRRC28-215ENST00000559774 ARHGAP39Q9C0H5 1083 aa9.94□□□□□ -0.82
LRRC28-215ENST00000559774 MAFGO15525 162 aa9.93□□□□□ -0.82
LRRC28-215ENST00000559774 CYP3A4P08684 503 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms