RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 VTA1Q9NP79 307 aa12.75□□□□□ -0.37
SPG11-216ENST00000559347 GPHNQ9NQX3 736 aaPredicted RBP12.75□□□□□ -0.37
SPG11-216ENST00000559347 ZBTB5O15062 677 aa12.74□□□□□ -0.37
SPG11-216ENST00000559347 PPP1R11O60927 126 aaPredicted RBP12.74□□□□□ -0.37
SPG11-216ENST00000559347 DDAH1O94760 285 aa12.74□□□□□ -0.37
SPG11-216ENST00000559347 EDNRBP24530 442 aa12.74□□□□□ -0.37
SPG11-216ENST00000559347 MCM5P33992 734 aa12.74□□□□□ -0.37
SPG11-216ENST00000559347 GJA9P57773 515 aa12.74□□□□□ -0.37
SPG11-216ENST00000559347 IRX5P78411 483 aaPredicted RBP12.74□□□□□ -0.37
SPG11-216ENST00000559347 C1orf53Q5VUE5 145 aa12.74□□□□□ -0.37
SPG11-216ENST00000559347 CCSAPQ6IQ19 270 aaPredicted RBP12.74□□□□□ -0.37
SPG11-216ENST00000559347 TAPT1Q6NXT6 567 aa12.74□□□□□ -0.37
SPG11-216ENST00000559347 SLC39A5Q6ZMH5 540 aa12.74□□□□□ -0.37
SPG11-216ENST00000559347 EEPD1Q7L9B9 569 aa12.74□□□□□ -0.37
SPG11-216ENST00000559347 CATIPQ7Z7H3 387 aa12.74□□□□□ -0.37
SPG11-216ENST00000559347 ZNF654Q8IZM8 581 aa12.74□□□□□ -0.37
SPG11-216ENST00000559347 RGS22Q8NE09 1264 aa12.74□□□□□ -0.37
SPG11-216ENST00000559347 KLHDC9Q8NEP7 349 aa12.74□□□□□ -0.37
SPG11-216ENST00000559347 DNERQ8NFT8 737 aa12.74□□□□□ -0.37
SPG11-216ENST00000559347 FERMT2Q96AC1 680 aa12.74□□□□□ -0.37
SPG11-216ENST00000559347 TMEM87BQ96K49 555 aa12.74□□□□□ -0.37
SPG11-216ENST00000559347 TSEN34Q9BSV6 310 aaKnown RBP12.74□□□□□ -0.37
SPG11-216ENST00000559347 MAF1Q9H063 256 aa12.74□□□□□ -0.37
SPG11-216ENST00000559347 RIOX1Q9H6W3 641 aa12.74□□□□□ -0.37
SPG11-216ENST00000559347 PCDH10Q9P2E7 1040 aa12.74□□□□□ -0.37
SPG11-216ENST00000559347 RBM27Q9P2N5 1060 aaKnown RBP12.74□□□□□ -0.37
SPG11-216ENST00000559347 MOXD2PA6NHM9 499 aa12.73□□□□□ -0.37
SPG11-216ENST00000559347 OPLAHO14841 1288 aa12.73□□□□□ -0.37
SPG11-216ENST00000559347 CTAGE5O15320 804 aa12.73□□□□□ -0.37
SPG11-216ENST00000559347 CYTH3O43739 400 aa12.73□□□□□ -0.37
SPG11-216ENST00000559347 C6orf222P0C671 652 aaPredicted RBP12.73□□□□□ -0.37
SPG11-216ENST00000559347 NKX3-2P78367 333 aa12.73□□□□□ -0.37
SPG11-216ENST00000559347 TNFAIP2Q03169 654 aa12.73□□□□□ -0.37
SPG11-216ENST00000559347 TRIM60Q495X7 471 aa12.73□□□□□ -0.37
SPG11-216ENST00000559347 RNF20Q5VTR2 975 aa12.73□□□□□ -0.37
SPG11-216ENST00000559347 TLK2Q86UE8 772 aa12.73□□□□□ -0.37
SPG11-216ENST00000559347 HOMER1Q86YM7 354 aa12.73□□□□□ -0.37
SPG11-216ENST00000559347 MAP3K14Q99558 947 aa12.73□□□□□ -0.37
SPG11-216ENST00000559347 GDF15Q99988 308 aa12.73□□□□□ -0.37
SPG11-216ENST00000559347 MYL10Q9BUA6 226 aa12.73□□□□□ -0.37
SPG11-216ENST00000559347 AMNQ9BXJ7 453 aa12.73□□□□□ -0.37
SPG11-216ENST00000559347 VAT1LQ9HCJ6 419 aa12.73□□□□□ -0.37
SPG11-216ENST00000559347 PDGFCQ9NRA1 345 aa12.73□□□□□ -0.37
SPG11-216ENST00000559347 GNEQ9Y223 722 aaKnown RBP12.73□□□□□ -0.37
SPG11-216ENST00000559347 ATP11BQ9Y2G3 1177 aa12.73□□□□□ -0.37
SPG11-216ENST00000559347 MRPL11Q9Y3B7 192 aaKnown RBP12.73□□□□□ -0.37
SPG11-216ENST00000559347 SMPD1P17405 629 aa12.72□□□□□ -0.37
SPG11-216ENST00000559347 PTGS1P23219 599 aa12.72□□□□□ -0.37
SPG11-216ENST00000559347 LIFRP42702 1097 aa12.72□□□□□ -0.37
SPG11-216ENST00000559347 MAGEA10P43363 369 aaPredicted RBP12.72□□□□□ -0.37
SPG11-216ENST00000559347 ACLYP53396 1101 aa12.72□□□□□ -0.37
SPG11-216ENST00000559347 GHRHRQ02643 423 aa12.72□□□□□ -0.37
SPG11-216ENST00000559347 NUP133Q8WUM0 1156 aa12.72□□□□□ -0.37
SPG11-216ENST00000559347 TBC1D5Q92609 795 aa12.72□□□□□ -0.37
SPG11-216ENST00000559347 PIGSQ96S52 555 aa12.72□□□□□ -0.37
SPG11-216ENST00000559347 SPC25Q9HBM1 224 aa12.72□□□□□ -0.37
SPG11-216ENST00000559347 COL20A1Q9P218 1284 aa12.72□□□□□ -0.37
SPG11-216ENST00000559347 SCN10AQ9Y5Y9 1956 aa12.72□□□□□ -0.37
SPG11-216ENST00000559347 MYH7BA7E2Y1 1941 aa12.72□□□□□ -0.37
SPG11-216ENST00000559347 A0A1W2PPC1 479 aa12.71□□□□□ -0.37
SPG11-216ENST00000559347 CCDC69A6NI79 296 aa12.71□□□□□ -0.37
SPG11-216ENST00000559347 SLC34A2O95436 690 aa12.71□□□□□ -0.37
SPG11-216ENST00000559347 ASGR1P07306 291 aa12.71□□□□□ -0.37
SPG11-216ENST00000559347 KIF5BP33176 963 aa12.71□□□□□ -0.37
SPG11-216ENST00000559347 HSD17B4P51659 736 aa12.71□□□□□ -0.37
SPG11-216ENST00000559347 PDE4DQ08499 809 aa12.71□□□□□ -0.37
SPG11-216ENST00000559347 KCNA10Q16322 511 aa12.71□□□□□ -0.37
SPG11-216ENST00000559347 ADCK5Q3MIX3 580 aa12.71□□□□□ -0.37
SPG11-216ENST00000559347 TSGA10IPQ3SY00 556 aa12.71□□□□□ -0.37
SPG11-216ENST00000559347 TMEM63BQ5T3F8 832 aa12.71□□□□□ -0.37
SPG11-216ENST00000559347 ERICH6BQ5W0A0 696 aa12.71□□□□□ -0.37
SPG11-216ENST00000559347 NFXL1Q6ZNB6 911 aa12.71□□□□□ -0.37
SPG11-216ENST00000559347 MCF2L2Q86YR7 1114 aa12.71□□□□□ -0.37
SPG11-216ENST00000559347 RASEFQ8IZ41 740 aa12.71□□□□□ -0.37
SPG11-216ENST00000559347 PCSK9Q8NBP7 692 aaKnown RBP12.71□□□□□ -0.37
SPG11-216ENST00000559347 CTCFLQ8NI51 663 aaPredicted RBP12.71□□□□□ -0.37
SPG11-216ENST00000559347 SYTL5Q8TDW5 730 aaPredicted RBP12.71□□□□□ -0.37
SPG11-216ENST00000559347 MPHOSPH6Q99547 160 aaKnown RBP12.71□□□□□ -0.37
SPG11-216ENST00000559347 SPZ1Q9BXG8 430 aa12.71□□□□□ -0.37
SPG11-216ENST00000559347 LRRC2Q9BYS8 371 aa12.71□□□□□ -0.37
SPG11-216ENST00000559347 STARD7Q9NQZ5 370 aa12.71□□□□□ -0.37
SPG11-216ENST00000559347 PDLIM7Q9NR12 457 aa12.71□□□□□ -0.37
SPG11-216ENST00000559347 PPP4R2Q9NY27 417 aa12.71□□□□□ -0.37
SPG11-216ENST00000559347 PCDHA1Q9Y5I3 950 aa12.71□□□□□ -0.37
SPG11-216ENST00000559347 DOCK5Q9H7D0 1870 aa12.71□□□□□ -0.37
SPG11-216ENST00000559347 TANC1Q9C0D5 1861 aa12.7□□□□□ -0.38
SPG11-216ENST00000559347 RBM47A0AV96 593 aaKnown RBP12.7□□□□□ -0.38
SPG11-216ENST00000559347 PLEKHA8P1O95397 391 aa12.7□□□□□ -0.38
SPG11-216ENST00000559347 CFBP00751 764 aa12.7□□□□□ -0.38
SPG11-216ENST00000559347 CENPBP07199 599 aaPredicted RBP12.7□□□□□ -0.38
SPG11-216ENST00000559347 RXRAP19793 462 aa12.7□□□□□ -0.38
SPG11-216ENST00000559347 BMP8BP34820 402 aa12.7□□□□□ -0.38
SPG11-216ENST00000559347 FXR1P51114 621 aaKnown RBP eCLIP12.7□□□□□ -0.38
SPG11-216ENST00000559347 BEX3Q00994 111 aa12.7□□□□□ -0.38
SPG11-216ENST00000559347 DUSP28Q4G0W2 176 aa12.7□□□□□ -0.38
SPG11-216ENST00000559347 IQSEC1Q6DN90 963 aa12.7□□□□□ -0.38
SPG11-216ENST00000559347 SGMS1Q86VZ5 419 aa12.7□□□□□ -0.38
SPG11-216ENST00000559347 TMTC2Q8N394 836 aa12.7□□□□□ -0.38
SPG11-216ENST00000559347 NEK1Q96PY6 1258 aa12.7□□□□□ -0.38
SPG11-216ENST00000559347 TAAR1Q96RJ0 339 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms