RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 IL17RBQ9NRM6 502 aa7.13□□□□□ -1.27
CTDSPL2-204ENST00000558966 HOXC10Q9NYD6 342 aa7.13□□□□□ -1.27
CTDSPL2-204ENST00000558966 ZNF236Q9UL36 1845 aa7.13□□□□□ -1.27
CTDSPL2-204ENST00000558966 TSPY2A6NKD2 308 aa7.12□□□□□ -1.27
CTDSPL2-204ENST00000558966 CCL5P13501 91 aa7.12□□□□□ -1.27
CTDSPL2-204ENST00000558966 CCNA1P78396 465 aa7.12□□□□□ -1.27
CTDSPL2-204ENST00000558966 C4orf48Q5BLP8 95 aa7.12□□□□□ -1.27
CTDSPL2-204ENST00000558966 SH3RF1Q7Z6J0 888 aa7.12□□□□□ -1.27
CTDSPL2-204ENST00000558966 PLEKHH3Q7Z736 793 aa7.12□□□□□ -1.27
CTDSPL2-204ENST00000558966 SKAP1Q86WV1 359 aa7.12□□□□□ -1.27
CTDSPL2-204ENST00000558966 MB21D1Q8N884 522 aa7.12□□□□□ -1.27
CTDSPL2-204ENST00000558966 REPS2Q8NFH8 660 aa7.12□□□□□ -1.27
CTDSPL2-204ENST00000558966 STK32AQ8WU08 396 aa7.12□□□□□ -1.27
CTDSPL2-204ENST00000558966 STAG1Q8WVM7 1258 aa7.12□□□□□ -1.27
CTDSPL2-204ENST00000558966 SOCS4Q8WXH5 440 aa7.12□□□□□ -1.27
CTDSPL2-204ENST00000558966 TRIB2Q92519 343 aa7.12□□□□□ -1.27
CTDSPL2-204ENST00000558966 SHISA4Q96DD7 197 aa7.12□□□□□ -1.27
CTDSPL2-204ENST00000558966 DSCC1Q9BVC3 393 aa7.12□□□□□ -1.27
CTDSPL2-204ENST00000558966 MOV10L1Q9BXT6 1211 aaKnown RBP7.12□□□□□ -1.27
CTDSPL2-204ENST00000558966 GZF1Q9H116 711 aaPredicted RBP7.12□□□□□ -1.27
CTDSPL2-204ENST00000558966 BIN2Q9UBW5 565 aaPredicted RBP7.12□□□□□ -1.27
CTDSPL2-204ENST00000558966 ZMIZ1Q9ULJ6 1067 aa7.12□□□□□ -1.27
CTDSPL2-204ENST00000558966 PPP1R9AQ9ULJ8 1098 aa7.12□□□□□ -1.27
CTDSPL2-204ENST00000558966 SYNPO2Q9UMS6 1093 aa7.12□□□□□ -1.27
CTDSPL2-204ENST00000558966 ADAMTS5Q9UNA0 930 aa7.12□□□□□ -1.27
CTDSPL2-204ENST00000558966 RANBP6O60518 1105 aaKnown RBP7.11□□□□□ -1.27
CTDSPL2-204ENST00000558966 HMGCRP04035 888 aa7.11□□□□□ -1.27
CTDSPL2-204ENST00000558966 CYP2B6P20813 491 aa7.11□□□□□ -1.27
CTDSPL2-204ENST00000558966 CHMLP26374 656 aa7.11□□□□□ -1.27
CTDSPL2-204ENST00000558966 NOVP48745 357 aa7.11□□□□□ -1.27
CTDSPL2-204ENST00000558966 MCCD1P59942 119 aaPredicted RBP7.11□□□□□ -1.27
CTDSPL2-204ENST00000558966 UBXN2AP68543 259 aa7.11□□□□□ -1.27
CTDSPL2-204ENST00000558966 TRIM32Q13049 653 aa7.11□□□□□ -1.27
CTDSPL2-204ENST00000558966 GRB14Q14449 540 aa7.11□□□□□ -1.27
CTDSPL2-204ENST00000558966 TMEM132BQ14DG7 1078 aa7.11□□□□□ -1.27
CTDSPL2-204ENST00000558966 CCL14Q16627 93 aa7.11□□□□□ -1.27
CTDSPL2-204ENST00000558966 CRTC2Q53ET0 693 aaPredicted RBP7.11□□□□□ -1.27
CTDSPL2-204ENST00000558966 AKNAD1Q5T1N1 836 aa7.11□□□□□ -1.27
CTDSPL2-204ENST00000558966 CENPQQ7L2Z9 268 aaPredicted RBP7.11□□□□□ -1.27
CTDSPL2-204ENST00000558966 RASGRP2Q7LDG7 609 aa7.11□□□□□ -1.27
CTDSPL2-204ENST00000558966 CCAR1Q8IX12 1150 aaKnown RBP7.11□□□□□ -1.27
CTDSPL2-204ENST00000558966 ZNF511Q8NB15 262 aa7.11□□□□□ -1.27
CTDSPL2-204ENST00000558966 GMCL1P1Q8NEA9 526 aa7.11□□□□□ -1.27
CTDSPL2-204ENST00000558966 ZNF592Q92610 1267 aa7.11□□□□□ -1.27
CTDSPL2-204ENST00000558966 TOMM22Q9NS69 142 aa7.11□□□□□ -1.27
CTDSPL2-204ENST00000558966 NEDD4P46934 1319 aa7.11□□□□□ -1.27
CTDSPL2-204ENST00000558966 RAD50Q92878 1312 aa7.11□□□□□ -1.27
CTDSPL2-204ENST00000558966 ZNFX1Q9P2E3 1918 aaKnown RBP7.11□□□□□ -1.27
CTDSPL2-204ENST00000558966 SLC15A5A6NIM6 579 aa7.11□□□□□ -1.27
CTDSPL2-204ENST00000558966 VWA5AO00534 786 aa7.11□□□□□ -1.27
CTDSPL2-204ENST00000558966 GJB1P08034 283 aa7.11□□□□□ -1.27
CTDSPL2-204ENST00000558966 XRCC5P13010 732 aaKnown RBP7.11□□□□□ -1.27
CTDSPL2-204ENST00000558966 ERCC3P19447 782 aa7.11□□□□□ -1.27
CTDSPL2-204ENST00000558966 PLS1Q14651 629 aa7.11□□□□□ -1.27
CTDSPL2-204ENST00000558966 RRP12Q5JTH9 1297 aaKnown RBP7.11□□□□□ -1.27
CTDSPL2-204ENST00000558966 WDR78Q5VTH9 848 aa7.11□□□□□ -1.27
CTDSPL2-204ENST00000558966 BPHLQ86WA6 291 aaPredicted RBP7.11□□□□□ -1.27
CTDSPL2-204ENST00000558966 SHCBP1Q8NEM2 672 aa7.11□□□□□ -1.27
CTDSPL2-204ENST00000558966 APBA2Q99767 749 aa7.11□□□□□ -1.27
CTDSPL2-204ENST00000558966 SLF1Q9BQI6 1058 aa7.11□□□□□ -1.27
CTDSPL2-204ENST00000558966 RNF208Q9H0X6 261 aa7.11□□□□□ -1.27
CTDSPL2-204ENST00000558966 ZNF214Q9UL59 606 aaPredicted RBP7.11□□□□□ -1.27
CTDSPL2-204ENST00000558966 STX8Q9UNK0 236 aa7.11□□□□□ -1.27
CTDSPL2-204ENST00000558966 NOVA2Q9UNW9 492 aaKnown RBP7.11□□□□□ -1.27
CTDSPL2-204ENST00000558966 BRD1O95696 1058 aa7.1□□□□□ -1.27
CTDSPL2-204ENST00000558966 HOXC6P09630 235 aa7.1□□□□□ -1.27
CTDSPL2-204ENST00000558966 PCP11498 1178 aaKnown RBP7.1□□□□□ -1.27
CTDSPL2-204ENST00000558966 RGS2P41220 211 aa7.1□□□□□ -1.27
CTDSPL2-204ENST00000558966 GJA8P48165 433 aa7.1□□□□□ -1.27
CTDSPL2-204ENST00000558966 MAP3K21Q5TCX8 1036 aa7.1□□□□□ -1.27
CTDSPL2-204ENST00000558966 TMEM164Q5U3C3 297 aa7.1□□□□□ -1.27
CTDSPL2-204ENST00000558966 SLFN13Q68D06 897 aa7.1□□□□□ -1.27
CTDSPL2-204ENST00000558966 MFSD6Q6ZSS7 791 aa7.1□□□□□ -1.27
CTDSPL2-204ENST00000558966 GMCL1Q96IK5 515 aa7.1□□□□□ -1.27
CTDSPL2-204ENST00000558966 CWC22Q9HCG8 908 aaKnown RBP7.1□□□□□ -1.27
CTDSPL2-204ENST00000558966 PAK6Q9NQU5 681 aaPredicted RBP7.1□□□□□ -1.27
CTDSPL2-204ENST00000558966 FLRT1Q9NZU1 646 aa7.1□□□□□ -1.27
CTDSPL2-204ENST00000558966 IVNS1ABPQ9Y6Y0 642 aa7.1□□□□□ -1.27
CTDSPL2-204ENST00000558966 ZNF213O14771 459 aa7.09□□□□□ -1.27
CTDSPL2-204ENST00000558966 SGSM2O43147 1006 aa7.09□□□□□ -1.27
CTDSPL2-204ENST00000558966 IGHA2P01877 340 aa7.09□□□□□ -1.27
CTDSPL2-204ENST00000558966 BMP3P12645 472 aa7.09□□□□□ -1.27
CTDSPL2-204ENST00000558966 ZKSCAN1P17029 563 aaPredicted RBP7.09□□□□□ -1.27
CTDSPL2-204ENST00000558966 MCCP23508 829 aa7.09□□□□□ -1.27
CTDSPL2-204ENST00000558966 ADORA2AP29274 412 aa7.09□□□□□ -1.27
CTDSPL2-204ENST00000558966 PTH1RQ03431 593 aa7.09□□□□□ -1.27
CTDSPL2-204ENST00000558966 RCSD1Q6JBY9 416 aa7.09□□□□□ -1.27
CTDSPL2-204ENST00000558966 NCAPG2Q86XI2 1143 aa7.09□□□□□ -1.27
CTDSPL2-204ENST00000558966 RIOX2Q8IUF8 465 aa7.09□□□□□ -1.27
CTDSPL2-204ENST00000558966 PRPF38AQ8NAV1 312 aaKnown RBP7.09□□□□□ -1.27
CTDSPL2-204ENST00000558966 NPLOC4Q8TAT6 608 aa7.09□□□□□ -1.27
CTDSPL2-204ENST00000558966 U2AF1L4Q8WU68 220 aaKnown RBP7.09□□□□□ -1.27
CTDSPL2-204ENST00000558966 CHMP4CQ96CF2 233 aa7.09□□□□□ -1.27
CTDSPL2-204ENST00000558966 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.09□□□□□ -1.27
CTDSPL2-204ENST00000558966 RNF41Q9H4P4 317 aaPredicted RBP7.09□□□□□ -1.27
CTDSPL2-204ENST00000558966 MROH8Q9H579 483 aa7.09□□□□□ -1.27
CTDSPL2-204ENST00000558966 SLC38A10Q9HBR0 1119 aa7.09□□□□□ -1.27
CTDSPL2-204ENST00000558966 TCP11L1Q9NUJ3 509 aa7.09□□□□□ -1.27
CTDSPL2-204ENST00000558966 FEM1BQ9UK73 627 aa7.09□□□□□ -1.27
CTDSPL2-204ENST00000558966 PLXNA1Q9UIW2 1896 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms