RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 RTP1P59025 263 aa10.26□□□□□ -0.77
SNRPA1-206ENST00000558059 CCSAPQ6IQ19 270 aaPredicted RBP10.26□□□□□ -0.77
SNRPA1-206ENST00000558059 KIAA1211Q6ZU35 1233 aa10.26□□□□□ -0.77
SNRPA1-206ENST00000558059 RNF180Q86T96 592 aa10.26□□□□□ -0.77
SNRPA1-206ENST00000558059 MB21D2Q8IYB1 491 aaPredicted RBP10.26□□□□□ -0.77
SNRPA1-206ENST00000558059 NCOA7Q8NI08 942 aa10.26□□□□□ -0.77
SNRPA1-206ENST00000558059 MORC4Q8TE76 937 aa10.26□□□□□ -0.77
SNRPA1-206ENST00000558059 FERMT2Q96AC1 680 aa10.26□□□□□ -0.77
SNRPA1-206ENST00000558059 GDF15Q99988 308 aa10.26□□□□□ -0.77
SNRPA1-206ENST00000558059 SYNRGQ9UMZ2 1314 aa10.26□□□□□ -0.77
SNRPA1-206ENST00000558059 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.25□□□□□ -0.77
SNRPA1-206ENST00000558059 PTPDC1A2A3K4 754 aa10.25□□□□□ -0.77
SNRPA1-206ENST00000558059 PALM3A6NDB9 673 aaPredicted RBP10.25□□□□□ -0.77
SNRPA1-206ENST00000558059 MYADML2A6NDP7 307 aa10.25□□□□□ -0.77
SNRPA1-206ENST00000558059 IFIT3O14879 490 aaKnown RBP10.25□□□□□ -0.77
SNRPA1-206ENST00000558059 BMP8BP34820 402 aa10.25□□□□□ -0.77
SNRPA1-206ENST00000558059 MAGEA10P43363 369 aaPredicted RBP10.25□□□□□ -0.77
SNRPA1-206ENST00000558059 FXR1P51114 621 aaKnown RBP eCLIP10.25□□□□□ -0.77
SNRPA1-206ENST00000558059 GJA9P57773 515 aa10.25□□□□□ -0.77
SNRPA1-206ENST00000558059 RPS6P62753 249 aaKnown RBP10.25□□□□□ -0.77
SNRPA1-206ENST00000558059 COL9A3Q14050 684 aaPredicted RBP10.25□□□□□ -0.77
SNRPA1-206ENST00000558059 CDC37Q16543 378 aaPredicted RBP10.25□□□□□ -0.77
SNRPA1-206ENST00000558059 SLC35G1Q2M3R5 365 aa10.25□□□□□ -0.77
SNRPA1-206ENST00000558059 QRICH1Q2TAL8 776 aa10.25□□□□□ -0.77
SNRPA1-206ENST00000558059 USH1GQ495M9 461 aa10.25□□□□□ -0.77
SNRPA1-206ENST00000558059 C1orf53Q5VUE5 145 aa10.25□□□□□ -0.77
SNRPA1-206ENST00000558059 TAPT1Q6NXT6 567 aa10.25□□□□□ -0.77
SNRPA1-206ENST00000558059 SLC30A10Q6XR72 485 aa10.25□□□□□ -0.77
SNRPA1-206ENST00000558059 CHST3Q7LGC8 479 aa10.25□□□□□ -0.77
SNRPA1-206ENST00000558059 RALYLQ86SE5 291 aaKnown RBP10.25□□□□□ -0.77
SNRPA1-206ENST00000558059 IGDCC4Q8TDY8 1250 aa10.25□□□□□ -0.77
SNRPA1-206ENST00000558059 TBC1D5Q92609 795 aa10.25□□□□□ -0.77
SNRPA1-206ENST00000558059 MTMR8Q96EF0 704 aa10.25□□□□□ -0.77
SNRPA1-206ENST00000558059 CCDC136Q96JN2 1154 aa10.25□□□□□ -0.77
SNRPA1-206ENST00000558059 TSEN34Q9BSV6 310 aaKnown RBP10.25□□□□□ -0.77
SNRPA1-206ENST00000558059 UPF3AQ9H1J1 476 aaKnown RBP10.25□□□□□ -0.77
SNRPA1-206ENST00000558059 JMJD4Q9H9V9 463 aa10.25□□□□□ -0.77
SNRPA1-206ENST00000558059 VAT1LQ9HCJ6 419 aa10.25□□□□□ -0.77
SNRPA1-206ENST00000558059 PDGFCQ9NRA1 345 aa10.25□□□□□ -0.77
SNRPA1-206ENST00000558059 MAD2L2Q9UI95 211 aa10.25□□□□□ -0.77
SNRPA1-206ENST00000558059 LOC102724159A0A0B4J2E5 919 aa10.24□□□□□ -0.77
SNRPA1-206ENST00000558059 A0A1W2PQ45 241 aaPredicted RBP10.24□□□□□ -0.77
SNRPA1-206ENST00000558059 A0A1W2PQY0 241 aa10.24□□□□□ -0.77
SNRPA1-206ENST00000558059 KLRF2D3W0D1 207 aa10.24□□□□□ -0.77
SNRPA1-206ENST00000558059 SLC27A2O14975 620 aa10.24□□□□□ -0.77
SNRPA1-206ENST00000558059 CTAGE5O15320 804 aa10.24□□□□□ -0.77
SNRPA1-206ENST00000558059 CALML3P27482 149 aa10.24□□□□□ -0.77
SNRPA1-206ENST00000558059 CST5P28325 142 aaPredicted RBP10.24□□□□□ -0.77
SNRPA1-206ENST00000558059 ALDH5A1P51649 535 aaPredicted RBP10.24□□□□□ -0.77
SNRPA1-206ENST00000558059 NKX3-2P78367 333 aa10.24□□□□□ -0.77
SNRPA1-206ENST00000558059 TNFAIP2Q03169 654 aa10.24□□□□□ -0.77
SNRPA1-206ENST00000558059 TROAPQ12815 778 aa10.24□□□□□ -0.77
SNRPA1-206ENST00000558059 GRM4Q14833 912 aa10.24□□□□□ -0.77
SNRPA1-206ENST00000558059 WTAPQ15007 396 aa10.24□□□□□ -0.77
SNRPA1-206ENST00000558059 NECTIN1Q15223 517 aa10.24□□□□□ -0.77
SNRPA1-206ENST00000558059 PWP2Q15269 919 aaKnown RBP10.24□□□□□ -0.77
SNRPA1-206ENST00000558059 KCNA10Q16322 511 aa10.24□□□□□ -0.77
SNRPA1-206ENST00000558059 RNF207Q6ZRF8 634 aa10.24□□□□□ -0.77
SNRPA1-206ENST00000558059 EEPD1Q7L9B9 569 aa10.24□□□□□ -0.77
SNRPA1-206ENST00000558059 RGS22Q8NE09 1264 aa10.24□□□□□ -0.77
SNRPA1-206ENST00000558059 GPHNQ9NQX3 736 aaPredicted RBP10.24□□□□□ -0.77
SNRPA1-206ENST00000558059 ADD3Q9UEY8 706 aaKnown RBP10.24□□□□□ -0.77
SNRPA1-206ENST00000558059 GNEQ9Y223 722 aaKnown RBP10.24□□□□□ -0.77
SNRPA1-206ENST00000558059 ATP11BQ9Y2G3 1177 aa10.24□□□□□ -0.77
SNRPA1-206ENST00000558059 A0A1W2PPC1 479 aa10.23□□□□□ -0.77
SNRPA1-206ENST00000558059 ERICH2A1L162 156 aa10.23□□□□□ -0.77
SNRPA1-206ENST00000558059 SMPD1P17405 629 aa10.23□□□□□ -0.77
SNRPA1-206ENST00000558059 PTGS1P23219 599 aa10.23□□□□□ -0.77
SNRPA1-206ENST00000558059 EDNRBP24530 442 aa10.23□□□□□ -0.77
SNRPA1-206ENST00000558059 ACLYP53396 1101 aa10.23□□□□□ -0.77
SNRPA1-206ENST00000558059 TLE2Q04725 743 aa10.23□□□□□ -0.77
SNRPA1-206ENST00000558059 MMRN1Q13201 1228 aa10.23□□□□□ -0.77
SNRPA1-206ENST00000558059 SART3Q15020 963 aaKnown RBP10.23□□□□□ -0.77
SNRPA1-206ENST00000558059 TRIM60Q495X7 471 aa10.23□□□□□ -0.77
SNRPA1-206ENST00000558059 TMEM67Q5HYA8 995 aa10.23□□□□□ -0.77
SNRPA1-206ENST00000558059 TMEM63BQ5T3F8 832 aa10.23□□□□□ -0.77
SNRPA1-206ENST00000558059 CREB3L3Q68CJ9 461 aa10.23□□□□□ -0.77
SNRPA1-206ENST00000558059 IQSEC1Q6DN90 963 aa10.23□□□□□ -0.77
SNRPA1-206ENST00000558059 FBXO11Q86XK2 927 aa10.23□□□□□ -0.77
SNRPA1-206ENST00000558059 SPNS2Q8IVW8 549 aa10.23□□□□□ -0.77
SNRPA1-206ENST00000558059 FBXO16Q8IX29 292 aaPredicted RBP10.23□□□□□ -0.77
SNRPA1-206ENST00000558059 MAF1Q9H063 256 aa10.23□□□□□ -0.77
SNRPA1-206ENST00000558059 LY9Q9HBG7 655 aa10.23□□□□□ -0.77
SNRPA1-206ENST00000558059 VTA1Q9NP79 307 aa10.23□□□□□ -0.77
SNRPA1-206ENST00000558059 ANO2Q9NQ90 1003 aa10.23□□□□□ -0.77
SNRPA1-206ENST00000558059 ABCB11O95342 1321 aa10.23□□□□□ -0.77
SNRPA1-206ENST00000558059 KIAA1217Q5T5P2 1943 aa10.23□□□□□ -0.77
SNRPA1-206ENST00000558059 LTBP2Q14767 1821 aa10.22□□□□□ -0.77
SNRPA1-206ENST00000558059 RBM47A0AV96 593 aaKnown RBP10.22□□□□□ -0.77
SNRPA1-206ENST00000558059 MOXD2PA6NHM9 499 aa10.22□□□□□ -0.77
SNRPA1-206ENST00000558059 OPLAHO14841 1288 aa10.22□□□□□ -0.77
SNRPA1-206ENST00000558059 PRC1O43663 620 aa10.22□□□□□ -0.77
SNRPA1-206ENST00000558059 CYTH3O43739 400 aa10.22□□□□□ -0.77
SNRPA1-206ENST00000558059 DHX16O60231 1041 aaKnown RBP10.22□□□□□ -0.77
SNRPA1-206ENST00000558059 PPP1R11O60927 126 aaPredicted RBP10.22□□□□□ -0.77
SNRPA1-206ENST00000558059 C6orf222P0C671 652 aaPredicted RBP10.22□□□□□ -0.77
SNRPA1-206ENST00000558059 MDM2Q00987 491 aaPredicted RBP10.22□□□□□ -0.77
SNRPA1-206ENST00000558059 GNASQ5JWF2 1037 aa10.22□□□□□ -0.77
SNRPA1-206ENST00000558059 SH3RF1Q7Z6J0 888 aa10.22□□□□□ -0.77
SNRPA1-206ENST00000558059 PCSK9Q8NBP7 692 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms