RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 TNKSO95271 1327 aa14.08□□□□□ -0.16
ACTN1-221ENST00000556571 TSPY2A6NKD2 308 aa14.07□□□□□ -0.16
ACTN1-221ENST00000556571 ERC2O15083 957 aa14.07□□□□□ -0.16
ACTN1-221ENST00000556571 GTPBP6O43824 516 aaPredicted RBP14.07□□□□□ -0.16
ACTN1-221ENST00000556571 ICAM1P05362 532 aa14.07□□□□□ -0.16
ACTN1-221ENST00000556571 CYP2C9P11712 490 aa14.07□□□□□ -0.16
ACTN1-221ENST00000556571 ACTN1P12814 892 aa14.07□□□□□ -0.16
ACTN1-221ENST00000556571 PLA2G5P39877 138 aa14.07□□□□□ -0.16
ACTN1-221ENST00000556571 CPT1AP50416 773 aa14.07□□□□□ -0.16
ACTN1-221ENST00000556571 SNAP25P60880 206 aa14.07□□□□□ -0.16
ACTN1-221ENST00000556571 PURAQ00577 322 aaKnown RBP14.07□□□□□ -0.16
ACTN1-221ENST00000556571 SKIV2LQ15477 1246 aaKnown RBP14.07□□□□□ -0.16
ACTN1-221ENST00000556571 PHOSPHO2Q8TCD6 241 aa14.07□□□□□ -0.16
ACTN1-221ENST00000556571 WDR11Q9BZH6 1224 aa14.07□□□□□ -0.16
ACTN1-221ENST00000556571 GPHNQ9NQX3 736 aaPredicted RBP14.07□□□□□ -0.16
ACTN1-221ENST00000556571 PRRC2BQ5JSZ5 2229 aaKnown RBP14.07□□□□□ -0.16
ACTN1-221ENST00000556571 RBM47A0AV96 593 aaKnown RBP14.06□□□□□ -0.16
ACTN1-221ENST00000556571 CA3P07451 260 aa14.06□□□□□ -0.16
ACTN1-221ENST00000556571 RFC2P35250 354 aa14.06□□□□□ -0.16
ACTN1-221ENST00000556571 TFF2Q03403 129 aa14.06□□□□□ -0.16
ACTN1-221ENST00000556571 BAATQ14032 418 aaPredicted RBP14.06□□□□□ -0.16
ACTN1-221ENST00000556571 BRDTQ58F21 947 aaPredicted RBP14.06□□□□□ -0.16
ACTN1-221ENST00000556571 DEFB128Q7Z7B8 93 aa14.06□□□□□ -0.16
ACTN1-221ENST00000556571 FAM122AQ96E09 287 aa14.06□□□□□ -0.16
ACTN1-221ENST00000556571 NECAB3Q96P71 396 aaPredicted RBP14.06□□□□□ -0.16
ACTN1-221ENST00000556571 PURBQ96QR8 312 aaKnown RBP14.06□□□□□ -0.16
ACTN1-221ENST00000556571 SEC62Q99442 399 aaKnown RBP14.06□□□□□ -0.16
ACTN1-221ENST00000556571 MTG1Q9BT17 334 aaPredicted RBP14.06□□□□□ -0.16
ACTN1-221ENST00000556571 IL17RBQ9NRM6 502 aa14.06□□□□□ -0.16
ACTN1-221ENST00000556571 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.06□□□□□ -0.16
ACTN1-221ENST00000556571 MTCH2Q9Y6C9 303 aa14.06□□□□□ -0.16
ACTN1-221ENST00000556571 MYL3P08590 195 aa14.05□□□□□ -0.16
ACTN1-221ENST00000556571 ALDH5A1P51649 535 aaPredicted RBP14.05□□□□□ -0.16
ACTN1-221ENST00000556571 ZMYM1Q5SVZ6 1142 aa14.05□□□□□ -0.16
ACTN1-221ENST00000556571 RETREG2Q8NC44 543 aa14.05□□□□□ -0.16
ACTN1-221ENST00000556571 DCAF4Q8WV16 495 aa14.05□□□□□ -0.16
ACTN1-221ENST00000556571 SLC9A7Q96T83 725 aa14.05□□□□□ -0.16
ACTN1-221ENST00000556571 RANBP17Q9H2T7 1088 aaKnown RBP14.05□□□□□ -0.16
ACTN1-221ENST00000556571 COG5Q9UP83 839 aa14.05□□□□□ -0.16
ACTN1-221ENST00000556571 TTC41PQ6P2S7 1318 aa14.05□□□□□ -0.16
ACTN1-221ENST00000556571 KIF28PB7ZC32 967 aa14.04□□□□□ -0.16
ACTN1-221ENST00000556571 RFXAPO00287 272 aa14.04□□□□□ -0.16
ACTN1-221ENST00000556571 PITPNM1O00562 1244 aa14.04□□□□□ -0.16
ACTN1-221ENST00000556571 NKRFO15226 690 aaKnown RBP eCLIP14.04□□□□□ -0.166e-6■■□□□ 11.7
ACTN1-221ENST00000556571 RANBP6O60518 1105 aaKnown RBP14.04□□□□□ -0.16
ACTN1-221ENST00000556571 NMT2O60551 498 aa14.04□□□□□ -0.16
ACTN1-221ENST00000556571 KPNA6O60684 536 aa14.04□□□□□ -0.16
ACTN1-221ENST00000556571 NOVP48745 357 aa14.04□□□□□ -0.16
ACTN1-221ENST00000556571 KCNQ1P51787 676 aa14.04□□□□□ -0.16
ACTN1-221ENST00000556571 CCDC96Q2M329 555 aa14.04□□□□□ -0.16
ACTN1-221ENST00000556571 NBPF20Q3BBV1 942 aa14.04□□□□□ -0.16
ACTN1-221ENST00000556571 FAM47CQ5HY64 1035 aa14.04□□□□□ -0.16
ACTN1-221ENST00000556571 NFRKBQ6P4R8 1299 aa14.04□□□□□ -0.16
ACTN1-221ENST00000556571 BTNL9Q6UXG8 535 aa14.04□□□□□ -0.16
ACTN1-221ENST00000556571 OR6J1Q8NGC5 347 aa14.04□□□□□ -0.16
ACTN1-221ENST00000556571 MPHOSPH6Q99547 160 aaKnown RBP14.04□□□□□ -0.16
ACTN1-221ENST00000556571 FSD1Q9BTV5 496 aa14.04□□□□□ -0.16
ACTN1-221ENST00000556571 RCAN3Q9UKA8 241 aa14.04□□□□□ -0.16
ACTN1-221ENST00000556571 PNMA2Q9UL42 364 aa14.04□□□□□ -0.16
ACTN1-221ENST00000556571 MTMR7Q9Y216 660 aa14.04□□□□□ -0.16
ACTN1-221ENST00000556571 RAD50Q92878 1312 aa14.04□□□□□ -0.16
ACTN1-221ENST00000556571 PTPDC1A2A3K4 754 aa14.03□□□□□ -0.16
ACTN1-221ENST00000556571 NFIBO00712 420 aa14.03□□□□□ -0.16
ACTN1-221ENST00000556571 IQCF3P0C7M6 154 aa14.03□□□□□ -0.16
ACTN1-221ENST00000556571 CTDSPL2Q05D32 466 aa14.03□□□□□ -0.16
ACTN1-221ENST00000556571 PTPN11Q06124 597 aaPredicted RBP14.03□□□□□ -0.16
ACTN1-221ENST00000556571 BFSP2Q13515 415 aa14.03□□□□□ -0.16
ACTN1-221ENST00000556571 SYDE2Q5VT97 1194 aa14.03□□□□□ -0.16
ACTN1-221ENST00000556571 FTOQ9C0B1 505 aaKnown RBP eCLIP14.03□□□□□ -0.16
ACTN1-221ENST00000556571 CERS4Q9HA82 394 aa14.03□□□□□ -0.16
ACTN1-221ENST00000556571 INCENPQ9NQS7 918 aa14.03□□□□□ -0.16
ACTN1-221ENST00000556571 TRANK1O15050 2925 aa14.03□□□□□ -0.16
ACTN1-221ENST00000556571 XIRP2A4UGR9 3374 aa14.02□□□□□ -0.16
ACTN1-221ENST00000556571 A6NJR5 290 aa14.02□□□□□ -0.17
ACTN1-221ENST00000556571 ORC4O43929 436 aa14.02□□□□□ -0.17
ACTN1-221ENST00000556571 SLC16A2P36021 539 aa14.02□□□□□ -0.17
ACTN1-221ENST00000556571 TAP1Q03518 808 aa14.02□□□□□ -0.17
ACTN1-221ENST00000556571 PDE4DQ08499 809 aa14.02□□□□□ -0.17
ACTN1-221ENST00000556571 PPP2R5BQ15173 497 aa14.02□□□□□ -0.17
ACTN1-221ENST00000556571 C20orf194Q5TEA3 1177 aa14.02□□□□□ -0.17
ACTN1-221ENST00000556571 TTBK2Q6IQ55 1244 aa14.02□□□□□ -0.17
ACTN1-221ENST00000556571 RNF207Q6ZRF8 634 aa14.02□□□□□ -0.17
ACTN1-221ENST00000556571 RASGRP2Q7LDG7 609 aa14.02□□□□□ -0.17
ACTN1-221ENST00000556571 HERC6Q8IVU3 1022 aa14.02□□□□□ -0.17
ACTN1-221ENST00000556571 PI4K2BQ8TCG2 481 aa14.02□□□□□ -0.17
ACTN1-221ENST00000556571 SCFD2Q8WU76 684 aa14.02□□□□□ -0.17
ACTN1-221ENST00000556571 ARNTL2Q8WYA1 636 aa14.02□□□□□ -0.17
ACTN1-221ENST00000556571 ANAPC4Q9UJX5 808 aa14.02□□□□□ -0.17
ACTN1-221ENST00000556571 NOD1Q9Y239 953 aa14.02□□□□□ -0.17
ACTN1-221ENST00000556571 TCF20Q9UGU0 1960 aaKnown RBP14.02□□□□□ -0.17
ACTN1-221ENST00000556571 GBF1Q92538 1859 aa14.01□□□□□ -0.17
ACTN1-221ENST00000556571 EPOPA6NHQ4 379 aa14.01□□□□□ -0.17
ACTN1-221ENST00000556571 B4DLN1 442 aa14.01□□□□□ -0.17
ACTN1-221ENST00000556571 FOXP2O15409 715 aa14.01□□□□□ -0.17
ACTN1-221ENST00000556571 BAIAP3O94812 1187 aa14.01□□□□□ -0.17
ACTN1-221ENST00000556571 TOP1P11387 765 aaKnown RBP14.01□□□□□ -0.17
ACTN1-221ENST00000556571 CALML3P27482 149 aa14.01□□□□□ -0.17
ACTN1-221ENST00000556571 MRPL12P52815 198 aaKnown RBP14.01□□□□□ -0.17
ACTN1-221ENST00000556571 DNERQ8NFT8 737 aa14.01□□□□□ -0.17
ACTN1-221ENST00000556571 CLEC4DQ8WXI8 215 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 219.7 ms