RNA–Protein interactions for RNA: ENST00000555759.1

SYNE3-204, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 2

Gene SYNE3, Length 5,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-204ENST00000555759 NLRP14Q86W24 1093 aa19.11■□□□□ 0.65
SYNE3-204ENST00000555759 USP27XA6NNY8 438 aa19.11■□□□□ 0.65
SYNE3-204ENST00000555759 ADAT2Q7Z6V5 191 aaKnown RBP19.11■□□□□ 0.65
SYNE3-204ENST00000555759 ZNF594Q96JF6 807 aaPredicted RBP19.11■□□□□ 0.65
SYNE3-204ENST00000555759 SETDB2Q96T68 719 aa19.11■□□□□ 0.65
SYNE3-204ENST00000555759 RNF26Q9BY78 433 aaPredicted RBP19.11■□□□□ 0.65
SYNE3-204ENST00000555759 UHRF1BP1LA0JNW5 1464 aa19.1■□□□□ 0.65
SYNE3-204ENST00000555759 DEUP1Q05D60 604 aa19.1■□□□□ 0.65
SYNE3-204ENST00000555759 NAA35Q5VZE5 725 aa19.1■□□□□ 0.65
SYNE3-204ENST00000555759 CASC4Q6P4E1 433 aa19.1■□□□□ 0.65
SYNE3-204ENST00000555759 ECEL1O95672 775 aa19.1■□□□□ 0.65
SYNE3-204ENST00000555759 ZMYM1Q5SVZ6 1142 aa19.1■□□□□ 0.65
SYNE3-204ENST00000555759 SLC39A2Q9NP94 309 aa19.1■□□□□ 0.65
SYNE3-204ENST00000555759 SCINQ9Y6U3 715 aa19.1■□□□□ 0.65
SYNE3-204ENST00000555759 SMCO2A6NFE2 343 aa19.1■□□□□ 0.65
SYNE3-204ENST00000555759 USP14P54578 494 aa19.1■□□□□ 0.65
SYNE3-204ENST00000555759 TMED1Q13445 227 aa19.1■□□□□ 0.65
SYNE3-204ENST00000555759 IFNL3Q8IZI9 196 aa19.1■□□□□ 0.65
SYNE3-204ENST00000555759 COG1Q8WTW3 980 aa19.1■□□□□ 0.65
SYNE3-204ENST00000555759 SPDL1Q96EA4 605 aa19.1■□□□□ 0.65
SYNE3-204ENST00000555759 FTOQ9C0B1 505 aaKnown RBP eCLIP19.1■□□□□ 0.65
SYNE3-204ENST00000555759 PCP11498 1178 aaKnown RBP19.1■□□□□ 0.65
SYNE3-204ENST00000555759 VPS41P49754 854 aa19.1■□□□□ 0.65
SYNE3-204ENST00000555759 NEK8Q86SG6 692 aa19.1■□□□□ 0.65
SYNE3-204ENST00000555759 PFDN4Q9NQP4 134 aa19.1■□□□□ 0.65
SYNE3-204ENST00000555759 ATP8A2Q9NTI2 1148 aa19.1■□□□□ 0.65
SYNE3-204ENST00000555759 KCNG1Q9UIX4 513 aa19.1■□□□□ 0.65
SYNE3-204ENST00000555759 ZBTB21Q9ULJ3 1066 aa19.1■□□□□ 0.65
SYNE3-204ENST00000555759 SRPRBQ9Y5M8 271 aaKnown RBP19.1■□□□□ 0.65
SYNE3-204ENST00000555759 SERPING1P05155 500 aa19.09■□□□□ 0.65
SYNE3-204ENST00000555759 MMEP08473 750 aa19.09■□□□□ 0.65
SYNE3-204ENST00000555759 NECTIN1Q15223 517 aa19.09■□□□□ 0.65
SYNE3-204ENST00000555759 HAUS8Q9BT25 410 aa19.09■□□□□ 0.65
SYNE3-204ENST00000555759 EPS15L1Q9UBC2 864 aa19.09■□□□□ 0.65
SYNE3-204ENST00000555759 CXCR5P32302 372 aa19.09■□□□□ 0.65
SYNE3-204ENST00000555759 EIF4A3P38919 411 aaKnown RBP19.09■□□□□ 0.65
SYNE3-204ENST00000555759 SLC7A5Q01650 507 aa19.09■□□□□ 0.65
SYNE3-204ENST00000555759 BIRC2Q13490 618 aa19.09■□□□□ 0.65
SYNE3-204ENST00000555759 SIRT2Q8IXJ6 389 aa19.09■□□□□ 0.65
SYNE3-204ENST00000555759 FAM89AQ96GI7 184 aa19.09■□□□□ 0.65
SYNE3-204ENST00000555759 ELAC2Q9BQ52 826 aaKnown RBP19.09■□□□□ 0.65
SYNE3-204ENST00000555759 hCG_1642624A0A1W2PR95 340 aa19.09■□□□□ 0.65
SYNE3-204ENST00000555759 MEFVO15553 781 aaPredicted RBP19.09■□□□□ 0.65
SYNE3-204ENST00000555759 KIF11P52732 1056 aa19.09■□□□□ 0.65
SYNE3-204ENST00000555759 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.09■□□□□ 0.65
SYNE3-204ENST00000555759 DTNBP1Q96EV8 351 aa19.09■□□□□ 0.65
SYNE3-204ENST00000555759 PTCH1Q13635 1447 aa19.09■□□□□ 0.65
SYNE3-204ENST00000555759 CYP2E1P05181 493 aaPredicted RBP19.09■□□□□ 0.65
SYNE3-204ENST00000555759 DIS3Q9Y2L1 958 aaKnown RBP19.09■□□□□ 0.65
SYNE3-204ENST00000555759 TTC36A6NLP5 189 aa19.08■□□□□ 0.65
SYNE3-204ENST00000555759 CHGBP05060 677 aa19.08■□□□□ 0.65
SYNE3-204ENST00000555759 PHEXP78562 749 aa19.08■□□□□ 0.65
SYNE3-204ENST00000555759 ARPP21Q9UBL0 812 aaPredicted RBP19.08■□□□□ 0.65
SYNE3-204ENST00000555759 ACTN3Q08043 901 aaPredicted RBP19.08■□□□□ 0.65
SYNE3-204ENST00000555759 TCP11X2Q5H9J9 407 aa19.08■□□□□ 0.65
SYNE3-204ENST00000555759 APOA5Q6Q788 366 aa19.08■□□□□ 0.65
SYNE3-204ENST00000555759 GPR108Q9NPR9 543 aa19.08■□□□□ 0.65
SYNE3-204ENST00000555759 COPRSQ9NQ92 184 aa19.08■□□□□ 0.65
SYNE3-204ENST00000555759 ZDHHC9Q9Y397 364 aa19.08■□□□□ 0.65
SYNE3-204ENST00000555759 ARHGAP31Q2M1Z3 1444 aa19.08■□□□□ 0.64
SYNE3-204ENST00000555759 TECP42680 631 aa19.08■□□□□ 0.64
SYNE3-204ENST00000555759 HADHQ16836 314 aaKnown RBP19.08■□□□□ 0.64
SYNE3-204ENST00000555759 POC1B-GALNT4F8VUJ3 575 aa19.08■□□□□ 0.64
SYNE3-204ENST00000555759 NUGGCQ68CJ6 796 aa19.08■□□□□ 0.64
SYNE3-204ENST00000555759 MB21D1Q8N884 522 aa19.08■□□□□ 0.64
SYNE3-204ENST00000555759 MYOM2P54296 1465 aa19.08■□□□□ 0.64
SYNE3-204ENST00000555759 RASSF10A6NK89 507 aa19.07■□□□□ 0.64
SYNE3-204ENST00000555759 CHMP2AO43633 222 aa19.07■□□□□ 0.64
SYNE3-204ENST00000555759 CCNE1P24864 410 aa19.07■□□□□ 0.64
SYNE3-204ENST00000555759 PTPN21Q16825 1174 aa19.07■□□□□ 0.64
SYNE3-204ENST00000555759 PTPROQ16827 1216 aa19.07■□□□□ 0.64
SYNE3-204ENST00000555759 KCNF1Q9H3M0 494 aa19.07■□□□□ 0.64
SYNE3-204ENST00000555759 INHBAP08476 426 aa19.07■□□□□ 0.64
SYNE3-204ENST00000555759 FTCDO95954 541 aa19.07■□□□□ 0.64
SYNE3-204ENST00000555759 CNGA1P29973 690 aa19.07■□□□□ 0.64
SYNE3-204ENST00000555759 SLC8A3P57103 927 aa19.07■□□□□ 0.64
SYNE3-204ENST00000555759 BFSP1Q12934 665 aa19.07■□□□□ 0.64
SYNE3-204ENST00000555759 PARP10Q53GL7 1025 aa19.07■□□□□ 0.64
SYNE3-204ENST00000555759 TNKSO95271 1327 aa19.07■□□□□ 0.64
SYNE3-204ENST00000555759 TNRQ92752 1358 aa19.07■□□□□ 0.64
SYNE3-204ENST00000555759 ESRRAP11474 423 aaPredicted RBP19.07■□□□□ 0.64
SYNE3-204ENST00000555759 ELF1P32519 619 aa19.07■□□□□ 0.64
SYNE3-204ENST00000555759 PPP2R2AP63151 447 aa19.07■□□□□ 0.64
SYNE3-204ENST00000555759 RCN2Q14257 317 aa19.07■□□□□ 0.64
SYNE3-204ENST00000555759 KRT31Q15323 416 aa19.07■□□□□ 0.64
SYNE3-204ENST00000555759 SIRT1Q96EB6 747 aa19.07■□□□□ 0.64
SYNE3-204ENST00000555759 ZNF148Q9UQR1 794 aa19.07■□□□□ 0.64
SYNE3-204ENST00000555759 YWHAEP62258 255 aaKnown RBP19.07■□□□□ 0.64
SYNE3-204ENST00000555759 DR1Q01658 176 aa19.07■□□□□ 0.64
SYNE3-204ENST00000555759 EFHD1Q9BUP0 239 aa19.07■□□□□ 0.64
SYNE3-204ENST00000555759 ABHD10Q9NUJ1 306 aa19.07■□□□□ 0.64
SYNE3-204ENST00000555759 MMP1P03956 469 aa19.06■□□□□ 0.64
SYNE3-204ENST00000555759 PGBD1Q96JS3 809 aa19.06■□□□□ 0.64
SYNE3-204ENST00000555759 SH3TC1Q8TE82 1336 aa19.06■□□□□ 0.64
SYNE3-204ENST00000555759 MYO1EQ12965 1108 aa19.06■□□□□ 0.64
SYNE3-204ENST00000555759 RESP18Q5W5W9 173 aa19.06■□□□□ 0.64
SYNE3-204ENST00000555759 ADGRG1Q9Y653 693 aa19.06■□□□□ 0.64
SYNE3-204ENST00000555759 SLC12A2P55011 1212 aa19.06■□□□□ 0.64
SYNE3-204ENST00000555759 UBE3CQ15386 1083 aa19.06■□□□□ 0.64
SYNE3-204ENST00000555759 ATP6V1G3Q96LB4 118 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms