RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 ASTN1O14525 1302 aa18.02■□□□□ 0.48
SNX6-205ENST00000555648 ERICH2A1L162 156 aa18.02■□□□□ 0.48
SNX6-205ENST00000555648 RPS6P62753 249 aaKnown RBP18.02■□□□□ 0.48
SNX6-205ENST00000555648 BRDTQ58F21 947 aaPredicted RBP18.02■□□□□ 0.48
SNX6-205ENST00000555648 C9orf50Q5SZB4 431 aa18.02■□□□□ 0.48
SNX6-205ENST00000555648 ZNF697Q5TEC3 545 aa18.02■□□□□ 0.48
SNX6-205ENST00000555648 TAPT1Q6NXT6 567 aa18.02■□□□□ 0.48
SNX6-205ENST00000555648 DNERQ8NFT8 737 aa18.02■□□□□ 0.48
SNX6-205ENST00000555648 MORC4Q8TE76 937 aa18.02■□□□□ 0.48
SNX6-205ENST00000555648 WDR11Q9BZH6 1224 aa18.02■□□□□ 0.48
SNX6-205ENST00000555648 VAT1LQ9HCJ6 419 aa18.02■□□□□ 0.48
SNX6-205ENST00000555648 GPHNQ9NQX3 736 aaPredicted RBP18.02■□□□□ 0.48
SNX6-205ENST00000555648 SMCHD1A6NHR9 2005 aa18.01■□□□□ 0.47
SNX6-205ENST00000555648 ABCB11O95342 1321 aa18.01■□□□□ 0.47
SNX6-205ENST00000555648 TIMP1P01033 207 aa18.01■□□□□ 0.47
SNX6-205ENST00000555648 ITGB8P26012 769 aa18.01■□□□□ 0.47
SNX6-205ENST00000555648 NKX3-2P78367 333 aa18.01■□□□□ 0.47
SNX6-205ENST00000555648 DUSP28Q4G0W2 176 aa18.01■□□□□ 0.47
SNX6-205ENST00000555648 RALYLQ86SE5 291 aaKnown RBP18.01■□□□□ 0.47
SNX6-205ENST00000555648 MCF2L2Q86YR7 1114 aa18.01■□□□□ 0.47
SNX6-205ENST00000555648 ADGRF4Q8IZF3 695 aa18.01■□□□□ 0.47
SNX6-205ENST00000555648 SEZ6LQ9BYH1 1024 aa18.01■□□□□ 0.47
SNX6-205ENST00000555648 CPVLQ9H3G5 476 aa18.01■□□□□ 0.47
SNX6-205ENST00000555648 MTMR10Q9NXD2 777 aa18.01■□□□□ 0.47
SNX6-205ENST00000555648 CTAGE5O15320 804 aa18■□□□□ 0.47
SNX6-205ENST00000555648 CHMLP26374 656 aa18■□□□□ 0.47
SNX6-205ENST00000555648 CDK7P50613 346 aa18■□□□□ 0.47
SNX6-205ENST00000555648 PPIGQ13427 754 aaKnown RBP eCLIP18■□□□□ 0.47
SNX6-205ENST00000555648 ITGA7Q13683 1181 aa18■□□□□ 0.47
SNX6-205ENST00000555648 SART3Q15020 963 aaKnown RBP18■□□□□ 0.47
SNX6-205ENST00000555648 PPP2R5BQ15173 497 aa18■□□□□ 0.47
SNX6-205ENST00000555648 FAM109BQ6ICB4 259 aaPredicted RBP18■□□□□ 0.47
SNX6-205ENST00000555648 FBXO11Q86XK2 927 aa18■□□□□ 0.47
SNX6-205ENST00000555648 TMEM199Q8N511 208 aa18■□□□□ 0.47
SNX6-205ENST00000555648 SLC17A8Q8NDX2 589 aa18■□□□□ 0.47
SNX6-205ENST00000555648 RGS22Q8NE09 1264 aa18■□□□□ 0.47
SNX6-205ENST00000555648 MRPL11Q9Y3B7 192 aaKnown RBP18■□□□□ 0.47
SNX6-205ENST00000555648 CPT1AP50416 773 aa17.99■□□□□ 0.47
SNX6-205ENST00000555648 FAM126BQ8IXS8 530 aa17.99■□□□□ 0.47
SNX6-205ENST00000555648 OR6J1Q8NGC5 347 aa17.99■□□□□ 0.47
SNX6-205ENST00000555648 SCFD2Q8WU76 684 aa17.99■□□□□ 0.47
SNX6-205ENST00000555648 FAM161BQ96MY7 647 aa17.99■□□□□ 0.47
SNX6-205ENST00000555648 PPP1R12CQ9BZL4 782 aa17.99■□□□□ 0.47
SNX6-205ENST00000555648 MAF1Q9H063 256 aa17.99■□□□□ 0.47
SNX6-205ENST00000555648 POLR3EQ9NVU0 708 aa17.99■□□□□ 0.47
SNX6-205ENST00000555648 TBX21Q9UL17 535 aa17.99■□□□□ 0.47
SNX6-205ENST00000555648 STXBP5LQ9Y2K9 1186 aa17.99■□□□□ 0.47
SNX6-205ENST00000555648 IFIT3O14879 490 aaKnown RBP17.98■□□□□ 0.47
SNX6-205ENST00000555648 NKRFO15226 690 aaKnown RBP eCLIP17.98■□□□□ 0.47
SNX6-205ENST00000555648 SMAD3P84022 425 aaKnown RBP17.98■□□□□ 0.47
SNX6-205ENST00000555648 QRICH1Q2TAL8 776 aa17.98■□□□□ 0.47
SNX6-205ENST00000555648 MFSD5Q6N075 450 aa17.98■□□□□ 0.47
SNX6-205ENST00000555648 IL25Q9H293 177 aa17.98■□□□□ 0.47
SNX6-205ENST00000555648 MYL3P08590 195 aa17.97■□□□□ 0.47
SNX6-205ENST00000555648 PTGS1P23219 599 aa17.97■□□□□ 0.47
SNX6-205ENST00000555648 TTLL4Q14679 1199 aa17.97■□□□□ 0.47
SNX6-205ENST00000555648 NCOA7Q8NI08 942 aa17.97■□□□□ 0.47
SNX6-205ENST00000555648 NSUN6Q8TEA1 469 aaKnown RBP17.97■□□□□ 0.47
SNX6-205ENST00000555648 AMNQ9BXJ7 453 aa17.97■□□□□ 0.47
SNX6-205ENST00000555648 RBM47A0AV96 593 aaKnown RBP17.96■□□□□ 0.47
SNX6-205ENST00000555648 KLRF2D3W0D1 207 aa17.96■□□□□ 0.47
SNX6-205ENST00000555648 TXNP10599 105 aaKnown RBP17.96■□□□□ 0.47
SNX6-205ENST00000555648 EPHB4P54760 987 aa17.96■□□□□ 0.47
SNX6-205ENST00000555648 PSMC6P62333 389 aa17.96■□□□□ 0.47
SNX6-205ENST00000555648 PTH1RQ03431 593 aa17.96■□□□□ 0.47
SNX6-205ENST00000555648 TRAF1Q13077 416 aa17.96■□□□□ 0.47
SNX6-205ENST00000555648 TMEM63BQ5T3F8 832 aa17.96■□□□□ 0.47
SNX6-205ENST00000555648 ARHGEF16Q5VV41 709 aa17.96■□□□□ 0.47
SNX6-205ENST00000555648 CYB5R4Q7L1T6 521 aa17.96■□□□□ 0.47
SNX6-205ENST00000555648 HIPK3Q9H422 1215 aa17.96■□□□□ 0.47
SNX6-205ENST00000555648 JMJD4Q9H9V9 463 aa17.96■□□□□ 0.47
SNX6-205ENST00000555648 RANBP2P49792 3224 aaKnown RBP17.95■□□□□ 0.46
SNX6-205ENST00000555648 SGSM2O43147 1006 aa17.95■□□□□ 0.46
SNX6-205ENST00000555648 KPNA6O60684 536 aa17.95■□□□□ 0.46
SNX6-205ENST00000555648 CFBP00751 764 aa17.95■□□□□ 0.46
SNX6-205ENST00000555648 CYP21A2P08686 494 aa17.95■□□□□ 0.46
SNX6-205ENST00000555648 CSF2RAP15509 400 aa17.95■□□□□ 0.46
SNX6-205ENST00000555648 EDNRBP24530 442 aa17.95■□□□□ 0.46
SNX6-205ENST00000555648 WTAPQ15007 396 aa17.95■□□□□ 0.46
SNX6-205ENST00000555648 PSRC1Q6PGN9 363 aaPredicted RBP17.95■□□□□ 0.46
SNX6-205ENST00000555648 SLC43A3Q8NBI5 491 aa17.95■□□□□ 0.46
SNX6-205ENST00000555648 SYTL5Q8TDW5 730 aaPredicted RBP17.95■□□□□ 0.46
SNX6-205ENST00000555648 RMDN3Q96TC7 470 aa17.95■□□□□ 0.46
SNX6-205ENST00000555648 MTG1Q9BT17 334 aaPredicted RBP17.95■□□□□ 0.46
SNX6-205ENST00000555648 MTIF3Q9H2K0 278 aaKnown RBP17.95■□□□□ 0.46
SNX6-205ENST00000555648 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.94■□□□□ 0.46
SNX6-205ENST00000555648 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.94■□□□□ 0.46
SNX6-205ENST00000555648 CD4P01730 458 aa17.94■□□□□ 0.46
SNX6-205ENST00000555648 SUPT20HL2P0C7V6 817 aa17.94■□□□□ 0.46
SNX6-205ENST00000555648 CYP2C18P33260 490 aa17.94■□□□□ 0.46
SNX6-205ENST00000555648 SEC23AQ15436 765 aa17.94■□□□□ 0.46
SNX6-205ENST00000555648 STXBP2Q15833 593 aa17.94■□□□□ 0.46
SNX6-205ENST00000555648 FAM47CQ5HY64 1035 aa17.94■□□□□ 0.46
SNX6-205ENST00000555648 SEPT14Q6ZU15 432 aa17.94■□□□□ 0.46
SNX6-205ENST00000555648 CATIPQ7Z7H3 387 aa17.94■□□□□ 0.46
SNX6-205ENST00000555648 STAG2Q8N3U4 1231 aa17.94■□□□□ 0.46
SNX6-205ENST00000555648 TAAR1Q96RJ0 339 aa17.94■□□□□ 0.46
SNX6-205ENST00000555648 IWS1Q96ST2 819 aa17.94■□□□□ 0.46
SNX6-205ENST00000555648 E7EWF7 191 aa17.93■□□□□ 0.46
SNX6-205ENST00000555648 PURAQ00577 322 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms