RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 PSTPIP2Q9H939 334 aa14.6□□□□□ -0.07
SYNE2-219ENST00000555323 RIC8AQ9NPQ8 531 aa14.6□□□□□ -0.07
SYNE2-219ENST00000555323 SMCO2A6NFE2 343 aa14.59□□□□□ -0.07
SYNE2-219ENST00000555323 GCOM1H8Y6P7 765 aaPredicted RBP14.59□□□□□ -0.07
SYNE2-219ENST00000555323 DTNBO60941 627 aa14.59□□□□□ -0.07
SYNE2-219ENST00000555323 COBLO75128 1261 aa14.59□□□□□ -0.07
SYNE2-219ENST00000555323 IGHA2P01877 340 aa14.59□□□□□ -0.07
SYNE2-219ENST00000555323 POLR2MP0CAP2 368 aa14.59□□□□□ -0.07
SYNE2-219ENST00000555323 XBP1P17861 261 aa14.59□□□□□ -0.07
SYNE2-219ENST00000555323 GNA11P29992 359 aa14.59□□□□□ -0.07
SYNE2-219ENST00000555323 FLT3LGP49771 235 aa14.59□□□□□ -0.07
SYNE2-219ENST00000555323 MRPL12P52815 198 aaKnown RBP14.59□□□□□ -0.07
SYNE2-219ENST00000555323 GALNT17Q6IS24 598 aa14.59□□□□□ -0.07
SYNE2-219ENST00000555323 NSMFQ6X4W1 530 aa14.59□□□□□ -0.07
SYNE2-219ENST00000555323 CCDC148Q8NFR7 591 aa14.59□□□□□ -0.07
SYNE2-219ENST00000555323 SYTL5Q8TDW5 730 aaPredicted RBP14.59□□□□□ -0.07
SYNE2-219ENST00000555323 ALG1Q9BT22 464 aa14.59□□□□□ -0.07
SYNE2-219ENST00000555323 CWC22Q9HCG8 908 aaKnown RBP14.59□□□□□ -0.07
SYNE2-219ENST00000555323 SLC5A4Q9NY91 659 aa14.59□□□□□ -0.07
SYNE2-219ENST00000555323 VPS54Q9P1Q0 977 aa14.59□□□□□ -0.07
SYNE2-219ENST00000555323 GABRQQ9UN88 632 aa14.59□□□□□ -0.07
SYNE2-219ENST00000555323 LOC102724159A0A0B4J2E5 919 aa14.58□□□□□ -0.08
SYNE2-219ENST00000555323 CFBP00751 764 aa14.58□□□□□ -0.08
SYNE2-219ENST00000555323 RGS2P41220 211 aa14.58□□□□□ -0.08
SYNE2-219ENST00000555323 CLK2P49760 499 aaKnown RBP14.58□□□□□ -0.08
SYNE2-219ENST00000555323 PRKCZQ05513 592 aa14.58□□□□□ -0.08
SYNE2-219ENST00000555323 PWP2Q15269 919 aaKnown RBP14.58□□□□□ -0.08
SYNE2-219ENST00000555323 ZNF467Q7Z7K2 595 aaPredicted RBP14.58□□□□□ -0.08
SYNE2-219ENST00000555323 DPP9Q86TI2 863 aa14.58□□□□□ -0.08
SYNE2-219ENST00000555323 DNERQ8NFT8 737 aa14.58□□□□□ -0.08
SYNE2-219ENST00000555323 CUL5Q93034 780 aa14.58□□□□□ -0.08
SYNE2-219ENST00000555323 PHF20Q9BVI0 1012 aa14.58□□□□□ -0.08
SYNE2-219ENST00000555323 C6orf50Q9HD87 102 aa14.58□□□□□ -0.08
SYNE2-219ENST00000555323 TRIM17Q9Y577 477 aa14.58□□□□□ -0.08
SYNE2-219ENST00000555323 POTEB2H3BUK9 544 aa14.57□□□□□ -0.08
SYNE2-219ENST00000555323 ECM2O94769 699 aaPredicted RBP14.57□□□□□ -0.08
SYNE2-219ENST00000555323 PGK2P07205 417 aa14.57□□□□□ -0.08
SYNE2-219ENST00000555323 CALML3P27482 149 aa14.57□□□□□ -0.08
SYNE2-219ENST00000555323 NPY5RQ15761 445 aa14.57□□□□□ -0.08
SYNE2-219ENST00000555323 PKN2Q16513 984 aaKnown RBP14.57□□□□□ -0.08
SYNE2-219ENST00000555323 MCTP2Q6DN12 878 aa14.57□□□□□ -0.08
SYNE2-219ENST00000555323 MAMDC4Q6UXC1 1216 aa14.57□□□□□ -0.08
SYNE2-219ENST00000555323 CTU1Q7Z7A3 348 aaKnown RBP14.57□□□□□ -0.08
SYNE2-219ENST00000555323 MSL3Q8N5Y2 521 aaKnown RBP14.57□□□□□ -0.08
SYNE2-219ENST00000555323 FAM184AQ8NB25 1140 aa14.57□□□□□ -0.08
SYNE2-219ENST00000555323 DAGLBQ8NCG7 672 aa14.57□□□□□ -0.08
SYNE2-219ENST00000555323 NPLOC4Q8TAT6 608 aa14.57□□□□□ -0.08
SYNE2-219ENST00000555323 PXYLP1Q8TE99 480 aa14.57□□□□□ -0.08
SYNE2-219ENST00000555323 FGD4Q96M96 766 aa14.57□□□□□ -0.08
SYNE2-219ENST00000555323 COL20A1Q9P218 1284 aa14.57□□□□□ -0.08
SYNE2-219ENST00000555323 SMC3Q9UQE7 1217 aa14.57□□□□□ -0.08
SYNE2-219ENST00000555323 PTPN22Q9Y2R2 807 aa14.57□□□□□ -0.08
SYNE2-219ENST00000555323 KIF3AQ9Y496 699 aa14.57□□□□□ -0.08
SYNE2-219ENST00000555323 DOCK3Q8IZD9 2030 aa14.57□□□□□ -0.08
SYNE2-219ENST00000555323 MYH6P13533 1939 aa14.56□□□□□ -0.08
SYNE2-219ENST00000555323 SOWAHBA6NEL2 793 aa14.56□□□□□ -0.08
SYNE2-219ENST00000555323 M0R2N6 131 aa14.56□□□□□ -0.08
SYNE2-219ENST00000555323 CYP2B6P20813 491 aa14.56□□□□□ -0.08
SYNE2-219ENST00000555323 GJB2P29033 226 aa14.56□□□□□ -0.08
SYNE2-219ENST00000555323 ADCY7P51828 1080 aa14.56□□□□□ -0.08
SYNE2-219ENST00000555323 NLRP5P59047 1200 aa14.56□□□□□ -0.08
SYNE2-219ENST00000555323 CNTN2Q02246 1040 aa14.56□□□□□ -0.08
SYNE2-219ENST00000555323 BECN1Q14457 450 aa14.56□□□□□ -0.08
SYNE2-219ENST00000555323 OLFML2BQ68BL8 750 aa14.56□□□□□ -0.08
SYNE2-219ENST00000555323 USP17L6PQ6QN14 398 aa14.56□□□□□ -0.08
SYNE2-219ENST00000555323 SLC30A10Q6XR72 485 aa14.56□□□□□ -0.08
SYNE2-219ENST00000555323 TRMT44Q8IYL2 757 aaKnown RBP14.56□□□□□ -0.08
SYNE2-219ENST00000555323 FBXO18Q8NFZ0 1043 aa14.56□□□□□ -0.08
SYNE2-219ENST00000555323 BICD2Q8TD16 824 aa14.56□□□□□ -0.08
SYNE2-219ENST00000555323 MORC4Q8TE76 937 aa14.56□□□□□ -0.08
SYNE2-219ENST00000555323 MAML3Q96JK9 1138 aa14.56□□□□□ -0.08
SYNE2-219ENST00000555323 TAAR1Q96RJ0 339 aa14.56□□□□□ -0.08
SYNE2-219ENST00000555323 APBA2Q99767 749 aa14.56□□□□□ -0.08
SYNE2-219ENST00000555323 GJB4Q9NTQ9 266 aa14.56□□□□□ -0.08
SYNE2-219ENST00000555323 ADD3Q9UEY8 706 aaKnown RBP14.56□□□□□ -0.08
SYNE2-219ENST00000555323 PCDHA4Q9UN74 947 aa14.56□□□□□ -0.08
SYNE2-219ENST00000555323 MGAMO43451 1857 aa14.56□□□□□ -0.08
SYNE2-219ENST00000555323 ZNF236Q9UL36 1845 aa14.55□□□□□ -0.08
SYNE2-219ENST00000555323 FOSP01100 380 aaPredicted RBP14.55□□□□□ -0.08
SYNE2-219ENST00000555323 HOXA13P31271 388 aaPredicted RBP14.55□□□□□ -0.08
SYNE2-219ENST00000555323 KRT40Q6A162 431 aa14.55□□□□□ -0.08
SYNE2-219ENST00000555323 C8orf76Q96K31 380 aa14.55□□□□□ -0.08
SYNE2-219ENST00000555323 PURBQ96QR8 312 aaKnown RBP14.55□□□□□ -0.08
SYNE2-219ENST00000555323 IWS1Q96ST2 819 aa14.55□□□□□ -0.08
SYNE2-219ENST00000555323 TSHZ2Q9NRE2 1034 aa14.55□□□□□ -0.08
SYNE2-219ENST00000555323 KCNJ14Q9UNX9 436 aa14.55□□□□□ -0.08
SYNE2-219ENST00000555323 ASTN1O14525 1302 aa14.55□□□□□ -0.08
SYNE2-219ENST00000555323 CASP8AP2Q9UKL3 1982 aa14.54□□□□□ -0.08
SYNE2-219ENST00000555323 ADAMTS3O15072 1205 aa14.54□□□□□ -0.08
SYNE2-219ENST00000555323 MMP1P03956 469 aa14.54□□□□□ -0.08
SYNE2-219ENST00000555323 EDNRBP24530 442 aa14.54□□□□□ -0.08
SYNE2-219ENST00000555323 ALDH5A1P51649 535 aaPredicted RBP14.54□□□□□ -0.08
SYNE2-219ENST00000555323 AP3B2Q13367 1082 aa14.54□□□□□ -0.08
SYNE2-219ENST00000555323 BLIDQ8IZY5 108 aa14.54□□□□□ -0.08
SYNE2-219ENST00000555323 NSUN6Q8TEA1 469 aaKnown RBP14.54□□□□□ -0.08
SYNE2-219ENST00000555323 RMDN3Q96TC7 470 aa14.54□□□□□ -0.08
SYNE2-219ENST00000555323 FRMPD4Q14CM0 1322 aa14.54□□□□□ -0.08
SYNE2-219ENST00000555323 PLXNB2O15031 1838 aa14.54□□□□□ -0.08
SYNE2-219ENST00000555323 ZNFX1Q9P2E3 1918 aaKnown RBP14.53□□□□□ -0.08
SYNE2-219ENST00000555323 RPTORQ8N122 1335 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms