RNA–Protein interactions for RNA: ENST00000555185.5

PRKCH-213, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-213ENST00000555185 C16orf86Q6ZW13 317 aa10.47□□□□□ -0.73
PRKCH-213ENST00000555185 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.47□□□□□ -0.73
PRKCH-213ENST00000555185 ADHFE1Q8IWW8 467 aa10.47□□□□□ -0.73
PRKCH-213ENST00000555185 CHST13Q8NET6 341 aa10.47□□□□□ -0.73
PRKCH-213ENST00000555185 FBXO22Q8NEZ5 403 aa10.47□□□□□ -0.73
PRKCH-213ENST00000555185 CRBNQ96SW2 442 aa10.47□□□□□ -0.73
PRKCH-213ENST00000555185 SEZ6LQ9BYH1 1024 aa10.47□□□□□ -0.73
PRKCH-213ENST00000555185 RNF146Q9NTX7 359 aa10.47□□□□□ -0.73
PRKCH-213ENST00000555185 FBXO40Q9UH90 709 aa10.47□□□□□ -0.73
PRKCH-213ENST00000555185 COG6Q9Y2V7 657 aa10.47□□□□□ -0.73
PRKCH-213ENST00000555185 FAM186AA6NE01 2351 aa10.46□□□□□ -0.73
PRKCH-213ENST00000555185 ASB14A6NK59 587 aa10.46□□□□□ -0.73
PRKCH-213ENST00000555185 GOLIM4O00461 696 aa10.46□□□□□ -0.73
PRKCH-213ENST00000555185 PITPNM1O00562 1244 aa10.46□□□□□ -0.73
PRKCH-213ENST00000555185 RGS20O76081 388 aa10.46□□□□□ -0.73
PRKCH-213ENST00000555185 IQSEC1Q6DN90 963 aa10.46□□□□□ -0.73
PRKCH-213ENST00000555185 RNF135Q8IUD6 432 aa10.46□□□□□ -0.73
PRKCH-213ENST00000555185 LRRC47Q8N1G4 583 aaKnown RBP10.46□□□□□ -0.73
PRKCH-213ENST00000555185 CLUAP1Q96AJ1 413 aa10.46□□□□□ -0.73
PRKCH-213ENST00000555185 DNAJC2Q99543 621 aaKnown RBP10.46□□□□□ -0.73
PRKCH-213ENST00000555185 RAD9AQ99638 391 aa10.46□□□□□ -0.73
PRKCH-213ENST00000555185 BCL11AQ9H165 835 aa10.46□□□□□ -0.73
PRKCH-213ENST00000555185 ACAD9Q9H845 621 aa10.46□□□□□ -0.73
PRKCH-213ENST00000555185 CLDND1Q9NY35 253 aa10.46□□□□□ -0.73
PRKCH-213ENST00000555185 ISY1Q9ULR0 285 aaKnown RBP10.46□□□□□ -0.73
PRKCH-213ENST00000555185 NOD1Q9Y239 953 aa10.46□□□□□ -0.73
PRKCH-213ENST00000555185 MICAL3Q7RTP6 2002 aa10.46□□□□□ -0.74
PRKCH-213ENST00000555185 CACNA1BQ00975 2339 aa10.45□□□□□ -0.74
PRKCH-213ENST00000555185 NLRC5Q86WI3 1866 aa10.45□□□□□ -0.74
PRKCH-213ENST00000555185 COL4A6Q14031 1691 aa10.45□□□□□ -0.74
PRKCH-213ENST00000555185 NBNO60934 754 aa10.45□□□□□ -0.74
PRKCH-213ENST00000555185 CSPG5O95196 566 aa10.45□□□□□ -0.74
PRKCH-213ENST00000555185 ALAS1P13196 640 aa10.45□□□□□ -0.74
PRKCH-213ENST00000555185 DLX2Q07687 328 aaPredicted RBP10.45□□□□□ -0.74
PRKCH-213ENST00000555185 PUS10Q3MIT2 529 aaKnown RBP10.45□□□□□ -0.74
PRKCH-213ENST00000555185 MUM1L1Q5H9M0 696 aa10.45□□□□□ -0.74
PRKCH-213ENST00000555185 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.45□□□□□ -0.74
PRKCH-213ENST00000555185 AACSQ86V21 672 aa10.45□□□□□ -0.74
PRKCH-213ENST00000555185 BANK1Q8NDB2 785 aa10.45□□□□□ -0.74
PRKCH-213ENST00000555185 OR6J1Q8NGC5 347 aa10.45□□□□□ -0.74
PRKCH-213ENST00000555185 SSH3Q8TE77 659 aa10.45□□□□□ -0.74
PRKCH-213ENST00000555185 COPS5Q92905 334 aa10.45□□□□□ -0.74
PRKCH-213ENST00000555185 PBXIP1Q96AQ6 731 aa10.45□□□□□ -0.74
PRKCH-213ENST00000555185 PABPC5Q96DU9 382 aaKnown RBP10.45□□□□□ -0.74
PRKCH-213ENST00000555185 MRPL38Q96DV4 380 aaKnown RBP10.45□□□□□ -0.74
PRKCH-213ENST00000555185 CTAGE1Q96RT6 745 aa10.45□□□□□ -0.74
PRKCH-213ENST00000555185 MTG1Q9BT17 334 aaPredicted RBP10.45□□□□□ -0.74
PRKCH-213ENST00000555185 ALG13Q9NP73 1137 aaKnown RBP10.45□□□□□ -0.74
PRKCH-213ENST00000555185 GPHNQ9NQX3 736 aaPredicted RBP10.45□□□□□ -0.74
PRKCH-213ENST00000555185 POLR3EQ9NVU0 708 aa10.45□□□□□ -0.74
PRKCH-213ENST00000555185 CLIP2Q9UDT6 1046 aa10.45□□□□□ -0.74
PRKCH-213ENST00000555185 VPS13AQ96RL7 3174 aa10.44□□□□□ -0.74
PRKCH-213ENST00000555185 TMEM221A6NGB7 291 aa10.44□□□□□ -0.74
PRKCH-213ENST00000555185 M0R296 226 aa10.44□□□□□ -0.74
PRKCH-213ENST00000555185 TRIM27P14373 513 aa10.44□□□□□ -0.74
PRKCH-213ENST00000555185 RASA1P20936 1047 aa10.44□□□□□ -0.74
PRKCH-213ENST00000555185 LTBRP36941 435 aa10.44□□□□□ -0.74
PRKCH-213ENST00000555185 VCPP55072 806 aaKnown RBP10.44□□□□□ -0.74
PRKCH-213ENST00000555185 ATP8B2P98198 1209 aa10.44□□□□□ -0.74
PRKCH-213ENST00000555185 FOXK2Q01167 660 aa10.44□□□□□ -0.74
PRKCH-213ENST00000555185 BFSP2Q13515 415 aa10.44□□□□□ -0.74
PRKCH-213ENST00000555185 PTGISQ16647 500 aa10.44□□□□□ -0.74
PRKCH-213ENST00000555185 DUSP28Q4G0W2 176 aa10.44□□□□□ -0.74
PRKCH-213ENST00000555185 HERC4Q5GLZ8 1057 aaPredicted RBP10.44□□□□□ -0.74
PRKCH-213ENST00000555185 CTR9Q6PD62 1173 aa10.44□□□□□ -0.74
PRKCH-213ENST00000555185 LRRC8DQ7L1W4 858 aa10.44□□□□□ -0.74
PRKCH-213ENST00000555185 RPAINQ86UA6 219 aa10.44□□□□□ -0.74
PRKCH-213ENST00000555185 DHX38Q92620 1227 aaKnown RBP10.44□□□□□ -0.74
PRKCH-213ENST00000555185 TRERF1Q96PN7 1200 aa10.44□□□□□ -0.74
PRKCH-213ENST00000555185 WDR11Q9BZH6 1224 aa10.44□□□□□ -0.74
PRKCH-213ENST00000555185 PRKAG3Q9UGI9 489 aa10.44□□□□□ -0.74
PRKCH-213ENST00000555185 FEM1BQ9UK73 627 aa10.44□□□□□ -0.74
PRKCH-213ENST00000555185 Q9Y3F1 56 aa10.44□□□□□ -0.74
PRKCH-213ENST00000555185 RARSP54136 660 aaKnown RBP10.43□□□□□ -0.74
PRKCH-213ENST00000555185 OAZ1P54368 228 aa10.43□□□□□ -0.74
PRKCH-213ENST00000555185 EPC2Q52LR7 807 aa10.43□□□□□ -0.74
PRKCH-213ENST00000555185 GDF6Q6KF10 455 aaPredicted RBP10.43□□□□□ -0.74
PRKCH-213ENST00000555185 NFRKBQ6P4R8 1299 aa10.43□□□□□ -0.74
PRKCH-213ENST00000555185 CNKSR3Q6P9H4 555 aa10.43□□□□□ -0.74
PRKCH-213ENST00000555185 NSMFQ6X4W1 530 aa10.43□□□□□ -0.74
PRKCH-213ENST00000555185 TRIM67Q6ZTA4 783 aa10.43□□□□□ -0.74
PRKCH-213ENST00000555185 RASGRP2Q7LDG7 609 aa10.43□□□□□ -0.74
PRKCH-213ENST00000555185 EDAQ92838 391 aa10.43□□□□□ -0.74
PRKCH-213ENST00000555185 ATOH1Q92858 354 aaPredicted RBP10.43□□□□□ -0.74
PRKCH-213ENST00000555185 UPF3BQ9BZI7 483 aaKnown RBP10.43□□□□□ -0.74
PRKCH-213ENST00000555185 IL1RAPL2Q9NP60 686 aa10.43□□□□□ -0.74
PRKCH-213ENST00000555185 VTA1Q9NP79 307 aa10.43□□□□□ -0.74
PRKCH-213ENST00000555185 ATP8A2Q9NTI2 1148 aa10.43□□□□□ -0.74
PRKCH-213ENST00000555185 CYP39A1Q9NYL5 469 aa10.43□□□□□ -0.74
PRKCH-213ENST00000555185 NYAP2Q9P242 653 aa10.43□□□□□ -0.74
PRKCH-213ENST00000555185 SLC4A4Q9Y6R1 1079 aa10.43□□□□□ -0.74
PRKCH-213ENST00000555185 TMEM232C9JQI7 657 aa10.42□□□□□ -0.74
PRKCH-213ENST00000555185 H0Y858 1186 aa10.42□□□□□ -0.74
PRKCH-213ENST00000555185 MBTPS2O43462 519 aa10.42□□□□□ -0.74
PRKCH-213ENST00000555185 SELPP16109 830 aa10.42□□□□□ -0.74
PRKCH-213ENST00000555185 GTF2F1P35269 517 aaKnown RBP eCLIP10.42□□□□□ -0.74
PRKCH-213ENST00000555185 CPT1AP50416 773 aa10.42□□□□□ -0.74
PRKCH-213ENST00000555185 GPM6BQ13491 265 aa10.42□□□□□ -0.74
PRKCH-213ENST00000555185 TTF1Q15361 905 aaPredicted RBP10.42□□□□□ -0.74
PRKCH-213ENST00000555185 PTPROQ16827 1216 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms