RNA–Protein interactions for RNA: ENST00000555170.1

TRIM9-204, Transcript of tripartite motif containing 9, humanhuman

TSL 4

Gene TRIM9, Length 554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-204ENST00000555170 TMEM87BQ96K49 555 aa9.8□□□□□ -0.84
TRIM9-204ENST00000555170 RNPC3Q96LT9 517 aaKnown RBP9.8□□□□□ -0.84
TRIM9-204ENST00000555170 MTA3Q9BTC8 594 aa9.8□□□□□ -0.84
TRIM9-204ENST00000555170 USP26Q9BXU7 913 aa9.8□□□□□ -0.84
TRIM9-204ENST00000555170 A1CFQ9NQ94 594 aaKnown RBP9.8□□□□□ -0.84
TRIM9-204ENST00000555170 CCPG1Q9ULG6 757 aa9.8□□□□□ -0.84
TRIM9-204ENST00000555170 ASTN1O14525 1302 aa9.8□□□□□ -0.84
TRIM9-204ENST00000555170 XIRP2A4UGR9 3374 aa9.8□□□□□ -0.84
TRIM9-204ENST00000555170 KLRF2D3W0D1 207 aa9.79□□□□□ -0.84
TRIM9-204ENST00000555170 NFIBO00712 420 aa9.79□□□□□ -0.84
TRIM9-204ENST00000555170 CYTH3O43739 400 aa9.79□□□□□ -0.84
TRIM9-204ENST00000555170 DDAH1O94760 285 aa9.79□□□□□ -0.84
TRIM9-204ENST00000555170 BMP1P13497 986 aa9.79□□□□□ -0.84
TRIM9-204ENST00000555170 ITGB8P26012 769 aa9.79□□□□□ -0.84
TRIM9-204ENST00000555170 KRT32Q14532 448 aa9.79□□□□□ -0.84
TRIM9-204ENST00000555170 QRICH1Q2TAL8 776 aa9.79□□□□□ -0.84
TRIM9-204ENST00000555170 ZNF792Q3KQV3 632 aa9.79□□□□□ -0.84
TRIM9-204ENST00000555170 OLFML2BQ68BL8 750 aa9.79□□□□□ -0.84
TRIM9-204ENST00000555170 DHX32Q7L7V1 743 aaKnown RBP9.79□□□□□ -0.84
TRIM9-204ENST00000555170 TRPV1Q8NER1 839 aa9.79□□□□□ -0.84
TRIM9-204ENST00000555170 CHST13Q8NET6 341 aa9.79□□□□□ -0.84
TRIM9-204ENST00000555170 IL27Q8NEV9 243 aa9.79□□□□□ -0.84
TRIM9-204ENST00000555170 NUP133Q8WUM0 1156 aa9.79□□□□□ -0.84
TRIM9-204ENST00000555170 JAKMIP1Q96N16 626 aaKnown RBP9.79□□□□□ -0.84
TRIM9-204ENST00000555170 TRERF1Q96PN7 1200 aa9.79□□□□□ -0.84
TRIM9-204ENST00000555170 ACAD9Q9H845 621 aa9.79□□□□□ -0.84
TRIM9-204ENST00000555170 JMJD4Q9H9V9 463 aa9.79□□□□□ -0.84
TRIM9-204ENST00000555170 WDR19Q8NEZ3 1342 aa9.79□□□□□ -0.84
TRIM9-204ENST00000555170 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.78□□□□□ -0.84
TRIM9-204ENST00000555170 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.78□□□□□ -0.84
TRIM9-204ENST00000555170 DNM1LO00429 736 aa9.78□□□□□ -0.84
TRIM9-204ENST00000555170 EPB41L2O43491 1005 aaKnown RBP9.78□□□□□ -0.84
TRIM9-204ENST00000555170 PPP1R11O60927 126 aaPredicted RBP9.78□□□□□ -0.84
TRIM9-204ENST00000555170 PLEKHA8P1O95397 391 aa9.78□□□□□ -0.84
TRIM9-204ENST00000555170 SEC24BO95487 1268 aa9.78□□□□□ -0.84
TRIM9-204ENST00000555170 CYBAP13498 195 aa9.78□□□□□ -0.84
TRIM9-204ENST00000555170 CNGA1P29973 690 aa9.78□□□□□ -0.84
TRIM9-204ENST00000555170 LIFRP42702 1097 aa9.78□□□□□ -0.84
TRIM9-204ENST00000555170 CNTN2Q02246 1040 aa9.78□□□□□ -0.84
TRIM9-204ENST00000555170 TKFCQ3LXA3 575 aa9.78□□□□□ -0.84
TRIM9-204ENST00000555170 USH1GQ495M9 461 aa9.78□□□□□ -0.84
TRIM9-204ENST00000555170 TRIM60Q495X7 471 aa9.78□□□□□ -0.84
TRIM9-204ENST00000555170 GJC2Q5T442 439 aaPredicted RBP9.78□□□□□ -0.84
TRIM9-204ENST00000555170 SLC30A10Q6XR72 485 aa9.78□□□□□ -0.84
TRIM9-204ENST00000555170 NFXL1Q6ZNB6 911 aa9.78□□□□□ -0.84
TRIM9-204ENST00000555170 CATIPQ7Z7H3 387 aa9.78□□□□□ -0.84
TRIM9-204ENST00000555170 SGMS1Q86VZ5 419 aa9.78□□□□□ -0.84
TRIM9-204ENST00000555170 CCDC144CPQ8IYA2 1237 aa9.78□□□□□ -0.84
TRIM9-204ENST00000555170 CLEC4DQ8WXI8 215 aa9.78□□□□□ -0.84
TRIM9-204ENST00000555170 MTMR8Q96EF0 704 aa9.78□□□□□ -0.84
TRIM9-204ENST00000555170 PURBQ96QR8 312 aaKnown RBP9.78□□□□□ -0.84
TRIM9-204ENST00000555170 GAS2L1Q99501 681 aaPredicted RBP9.78□□□□□ -0.84
TRIM9-204ENST00000555170 PRDM12Q9H4Q4 367 aa9.78□□□□□ -0.84
TRIM9-204ENST00000555170 VAT1LQ9HCJ6 419 aa9.78□□□□□ -0.84
TRIM9-204ENST00000555170 PDLIM7Q9NR12 457 aa9.78□□□□□ -0.84
TRIM9-204ENST00000555170 FBXO40Q9UH90 709 aa9.78□□□□□ -0.84
TRIM9-204ENST00000555170 DDX20Q9UHI6 824 aaKnown RBP9.78□□□□□ -0.84
TRIM9-204ENST00000555170 BRPF3Q9ULD4 1205 aa9.78□□□□□ -0.84
TRIM9-204ENST00000555170 DDX49Q9Y6V7 483 aaKnown RBP9.78□□□□□ -0.84
TRIM9-204ENST00000555170 MUC6Q6W4X9 2439 aa9.77□□□□□ -0.84
TRIM9-204ENST00000555170 SOWAHBA6NEL2 793 aa9.77□□□□□ -0.85
TRIM9-204ENST00000555170 CCDC69A6NI79 296 aa9.77□□□□□ -0.85
TRIM9-204ENST00000555170 DHX16O60231 1041 aaKnown RBP9.77□□□□□ -0.85
TRIM9-204ENST00000555170 CASTP20810 708 aaKnown RBP9.77□□□□□ -0.85
TRIM9-204ENST00000555170 RPS6KB1P23443 525 aa9.77□□□□□ -0.85
TRIM9-204ENST00000555170 ADGRE1Q14246 886 aa9.77□□□□□ -0.85
TRIM9-204ENST00000555170 C8orf34Q49A92 452 aa9.77□□□□□ -0.85
TRIM9-204ENST00000555170 PRAMEF19Q5SWL8 479 aa9.77□□□□□ -0.85
TRIM9-204ENST00000555170 APOA5Q6Q788 366 aa9.77□□□□□ -0.85
TRIM9-204ENST00000555170 NSMFQ6X4W1 530 aa9.77□□□□□ -0.85
TRIM9-204ENST00000555170 MICU3Q86XE3 530 aa9.77□□□□□ -0.85
TRIM9-204ENST00000555170 HOMER1Q86YM7 354 aa9.77□□□□□ -0.85
TRIM9-204ENST00000555170 CMTR1Q8N1G2 835 aaKnown RBP9.77□□□□□ -0.85
TRIM9-204ENST00000555170 ANKRD35Q8N283 1001 aa9.77□□□□□ -0.85
TRIM9-204ENST00000555170 FAM133AQ8N9E0 248 aa9.77□□□□□ -0.85
TRIM9-204ENST00000555170 TIFAQ96CG3 184 aa9.77□□□□□ -0.85
TRIM9-204ENST00000555170 DDX11Q96FC9 970 aa9.77□□□□□ -0.85
TRIM9-204ENST00000555170 PIGSQ96S52 555 aa9.77□□□□□ -0.85
TRIM9-204ENST00000555170 RIOX1Q9H6W3 641 aa9.77□□□□□ -0.85
TRIM9-204ENST00000555170 CYP39A1Q9NYL5 469 aa9.77□□□□□ -0.85
TRIM9-204ENST00000555170 TCF20Q9UGU0 1960 aaKnown RBP9.77□□□□□ -0.85
TRIM9-204ENST00000555170 OPLAHO14841 1288 aa9.76□□□□□ -0.85
TRIM9-204ENST00000555170 IGFBP4P22692 258 aa9.76□□□□□ -0.85
TRIM9-204ENST00000555170 PBX2P40425 430 aa9.76□□□□□ -0.85
TRIM9-204ENST00000555170 TFF2Q03403 129 aa9.76□□□□□ -0.85
TRIM9-204ENST00000555170 TMEM31Q5JXX7 168 aa9.76□□□□□ -0.85
TRIM9-204ENST00000555170 MFSD14CQ5VZR4 134 aa9.76□□□□□ -0.85
TRIM9-204ENST00000555170 BLOC1S2Q6QNY1 142 aa9.76□□□□□ -0.85
TRIM9-204ENST00000555170 Q6ZUG5 572 aa9.76□□□□□ -0.85
TRIM9-204ENST00000555170 SRBD1Q8N5C6 995 aaKnown RBP9.76□□□□□ -0.85
TRIM9-204ENST00000555170 CTCFLQ8NI51 663 aaPredicted RBP9.76□□□□□ -0.85
TRIM9-204ENST00000555170 MAP3K14Q99558 947 aa9.76□□□□□ -0.85
TRIM9-204ENST00000555170 TINF2Q9BSI4 451 aa9.76□□□□□ -0.85
TRIM9-204ENST00000555170 SLC5A4Q9NY91 659 aa9.76□□□□□ -0.85
TRIM9-204ENST00000555170 DIS3Q9Y2L1 958 aaKnown RBP9.76□□□□□ -0.85
TRIM9-204ENST00000555170 SLC12A7Q9Y666 1083 aa9.76□□□□□ -0.85
TRIM9-204ENST00000555170 ABCB11O95342 1321 aa9.76□□□□□ -0.85
TRIM9-204ENST00000555170 CNTNAP5Q8WYK1 1306 aa9.76□□□□□ -0.85
TRIM9-204ENST00000555170 NID2Q14112 1375 aa9.75□□□□□ -0.85
TRIM9-204ENST00000555170 KLF18A0A0U1RQI7 1052 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms