RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 DAGLBQ8NCG7 672 aa18.89■□□□□ 0.61
SPTLC2-203ENST00000554901 C8orf76Q96K31 380 aa18.89■□□□□ 0.61
SPTLC2-203ENST00000554901 PHF20Q9BVI0 1012 aa18.89■□□□□ 0.61
SPTLC2-203ENST00000554901 CYP39A1Q9NYL5 469 aa18.89■□□□□ 0.61
SPTLC2-203ENST00000554901 DNAJC25-GNG10A0A024R161 153 aa18.88■□□□□ 0.61
SPTLC2-203ENST00000554901 CFBP00751 764 aa18.88■□□□□ 0.61
SPTLC2-203ENST00000554901 RPS6P62753 249 aaKnown RBP18.88■□□□□ 0.61
SPTLC2-203ENST00000554901 MORN1Q5T089 497 aa18.88■□□□□ 0.61
SPTLC2-203ENST00000554901 FBXO18Q8NFZ0 1043 aa18.88■□□□□ 0.61
SPTLC2-203ENST00000554901 TRIM47Q96LD4 638 aa18.88■□□□□ 0.61
SPTLC2-203ENST00000554901 SLC5A4Q9NY91 659 aa18.88■□□□□ 0.61
SPTLC2-203ENST00000554901 TSKSQ9UJT2 592 aa18.88■□□□□ 0.61
SPTLC2-203ENST00000554901 ZNF236Q9UL36 1845 aa18.88■□□□□ 0.61
SPTLC2-203ENST00000554901 SMCHD1A6NHR9 2005 aa18.88■□□□□ 0.61
SPTLC2-203ENST00000554901 MEIS2O14770 477 aa18.87■□□□□ 0.61
SPTLC2-203ENST00000554901 FOXN1O15353 648 aa18.87■□□□□ 0.61
SPTLC2-203ENST00000554901 DTNBO60941 627 aa18.87■□□□□ 0.61
SPTLC2-203ENST00000554901 HSPA8P11142 646 aaKnown RBP18.87■□□□□ 0.61
SPTLC2-203ENST00000554901 PRMT2P55345 433 aa18.87■□□□□ 0.61
SPTLC2-203ENST00000554901 BAATQ14032 418 aaPredicted RBP18.87■□□□□ 0.61
SPTLC2-203ENST00000554901 SHISA4Q96DD7 197 aa18.87■□□□□ 0.61
SPTLC2-203ENST00000554901 NUDT12Q9BQG2 462 aa18.87■□□□□ 0.61
SPTLC2-203ENST00000554901 BRMS1Q9HCU9 246 aa18.87■□□□□ 0.61
SPTLC2-203ENST00000554901 PCDHA4Q9UN74 947 aa18.87■□□□□ 0.61
SPTLC2-203ENST00000554901 DIS3Q9Y2L1 958 aaKnown RBP18.87■□□□□ 0.61
SPTLC2-203ENST00000554901 LOC102724159A0A0B4J2E5 919 aa18.86■□□□□ 0.61
SPTLC2-203ENST00000554901 FOSP01100 380 aaPredicted RBP18.86■□□□□ 0.61
SPTLC2-203ENST00000554901 MMP1P03956 469 aa18.86■□□□□ 0.61
SPTLC2-203ENST00000554901 HOXC6P09630 235 aa18.86■□□□□ 0.61
SPTLC2-203ENST00000554901 ADORA2AP29274 412 aa18.86■□□□□ 0.61
SPTLC2-203ENST00000554901 CTGFP29279 349 aa18.86■□□□□ 0.61
SPTLC2-203ENST00000554901 AP3B2Q13367 1082 aa18.86■□□□□ 0.61
SPTLC2-203ENST00000554901 PWP2Q15269 919 aaKnown RBP18.86■□□□□ 0.61
SPTLC2-203ENST00000554901 LARP1BQ659C4 914 aaKnown RBP18.86■□□□□ 0.61
SPTLC2-203ENST00000554901 KRT40Q6A162 431 aa18.86■□□□□ 0.61
SPTLC2-203ENST00000554901 CD99L2Q8TCZ2 262 aa18.86■□□□□ 0.61
SPTLC2-203ENST00000554901 USP6NLQ92738 828 aa18.86■□□□□ 0.61
SPTLC2-203ENST00000554901 DAXXQ9UER7 740 aaPredicted RBP18.86■□□□□ 0.61
SPTLC2-203ENST00000554901 GJD2Q9UKL4 321 aa18.86■□□□□ 0.61
SPTLC2-203ENST00000554901 POTEB2H3BUK9 544 aa18.85■□□□□ 0.61
SPTLC2-203ENST00000554901 MAP2K5Q13163 448 aa18.85■□□□□ 0.61
SPTLC2-203ENST00000554901 SAFBQ15424 915 aaKnown RBP eCLIP18.85■□□□□ 0.61
SPTLC2-203ENST00000554901 REXO1Q8N1G1 1221 aaKnown RBP18.85■□□□□ 0.61
SPTLC2-203ENST00000554901 FAM133AQ8N9E0 248 aa18.85■□□□□ 0.61
SPTLC2-203ENST00000554901 DNERQ8NFT8 737 aa18.85■□□□□ 0.61
SPTLC2-203ENST00000554901 SYTL5Q8TDW5 730 aaPredicted RBP18.85■□□□□ 0.61
SPTLC2-203ENST00000554901 ARHGAP39Q9C0H5 1083 aa18.85■□□□□ 0.61
SPTLC2-203ENST00000554901 ADD3Q9UEY8 706 aaKnown RBP18.85■□□□□ 0.61
SPTLC2-203ENST00000554901 RBBP6Q7Z6E9 1792 aaKnown RBP18.85■□□□□ 0.61
SPTLC2-203ENST00000554901 MGAMO43451 1857 aa18.85■□□□□ 0.61
SPTLC2-203ENST00000554901 XRCC5P13010 732 aaKnown RBP18.84■□□□□ 0.61
SPTLC2-203ENST00000554901 RGS2P41220 211 aa18.84■□□□□ 0.61
SPTLC2-203ENST00000554901 CLK2P49760 499 aaKnown RBP18.84■□□□□ 0.61
SPTLC2-203ENST00000554901 NPY5RQ15761 445 aa18.84■□□□□ 0.61
SPTLC2-203ENST00000554901 SLC30A10Q6XR72 485 aa18.84■□□□□ 0.61
SPTLC2-203ENST00000554901 ZNF467Q7Z7K2 595 aaPredicted RBP18.84■□□□□ 0.61
SPTLC2-203ENST00000554901 DPP9Q86TI2 863 aa18.84■□□□□ 0.61
SPTLC2-203ENST00000554901 BLIDQ8IZY5 108 aa18.84■□□□□ 0.61
SPTLC2-203ENST00000554901 TBC1D5Q92609 795 aa18.84■□□□□ 0.61
SPTLC2-203ENST00000554901 KCNJ14Q9UNX9 436 aa18.84■□□□□ 0.61
SPTLC2-203ENST00000554901 PLXNB2O15031 1838 aa18.84■□□□□ 0.61
SPTLC2-203ENST00000554901 H3BQV1 296 aa18.84■□□□□ 0.61
SPTLC2-203ENST00000554901 IRF5Q13568 498 aa18.84■□□□□ 0.61
SPTLC2-203ENST00000554901 ZNF792Q3KQV3 632 aa18.84■□□□□ 0.61
SPTLC2-203ENST00000554901 IFFO2Q5TF58 517 aa18.84■□□□□ 0.61
SPTLC2-203ENST00000554901 USP17L6PQ6QN14 398 aa18.84■□□□□ 0.61
SPTLC2-203ENST00000554901 EHMT1Q9H9B1 1298 aa18.84■□□□□ 0.61
SPTLC2-203ENST00000554901 GJB4Q9NTQ9 266 aa18.84■□□□□ 0.61
SPTLC2-203ENST00000554901 FOXD4L1Q9NU39 408 aa18.84■□□□□ 0.61
SPTLC2-203ENST00000554901 SRRDQ9UH36 339 aa18.84■□□□□ 0.61
SPTLC2-203ENST00000554901 SPDYE3A6NKU9 549 aa18.83■□□□□ 0.6
SPTLC2-203ENST00000554901 B4DLN1 442 aa18.83■□□□□ 0.6
SPTLC2-203ENST00000554901 M0R2N6 131 aa18.83■□□□□ 0.6
SPTLC2-203ENST00000554901 HOXA13P31271 388 aaPredicted RBP18.83■□□□□ 0.6
SPTLC2-203ENST00000554901 KRT2P35908 639 aa18.83■□□□□ 0.6
SPTLC2-203ENST00000554901 MSL3Q8N5Y2 521 aaKnown RBP18.83■□□□□ 0.6
SPTLC2-203ENST00000554901 MPHOSPH6Q99547 160 aaKnown RBP18.83■□□□□ 0.6
SPTLC2-203ENST00000554901 APBA2Q99767 749 aa18.83■□□□□ 0.6
SPTLC2-203ENST00000554901 COBLO75128 1261 aa18.82■□□□□ 0.6
SPTLC2-203ENST00000554901 PGK2P07205 417 aa18.82■□□□□ 0.6
SPTLC2-203ENST00000554901 SYT1P21579 422 aa18.82■□□□□ 0.6
SPTLC2-203ENST00000554901 DIS3L2Q8IYB7 885 aaKnown RBP18.82■□□□□ 0.6
SPTLC2-203ENST00000554901 TRMT44Q8IYL2 757 aaKnown RBP18.82■□□□□ 0.6
SPTLC2-203ENST00000554901 NSUN6Q8TEA1 469 aaKnown RBP18.82■□□□□ 0.6
SPTLC2-203ENST00000554901 FOXP1Q9H334 677 aaPredicted RBP18.82■□□□□ 0.6
SPTLC2-203ENST00000554901 FRMPD4Q14CM0 1322 aa18.82■□□□□ 0.6
SPTLC2-203ENST00000554901 FLT3LGP49771 235 aa18.81■□□□□ 0.6
SPTLC2-203ENST00000554901 LBX1P52954 281 aa18.81■□□□□ 0.6
SPTLC2-203ENST00000554901 CAP1Q01518 475 aa18.81■□□□□ 0.6
SPTLC2-203ENST00000554901 UBE2SQ16763 222 aa18.81■□□□□ 0.6
SPTLC2-203ENST00000554901 KRT25Q7Z3Z0 450 aa18.81■□□□□ 0.6
SPTLC2-203ENST00000554901 IWS1Q96ST2 819 aa18.81■□□□□ 0.6
SPTLC2-203ENST00000554901 RMDN3Q96TC7 470 aa18.81■□□□□ 0.6
SPTLC2-203ENST00000554901 COL20A1Q9P218 1284 aa18.81■□□□□ 0.6
SPTLC2-203ENST00000554901 BIN2Q9UBW5 565 aaPredicted RBP18.81■□□□□ 0.6
SPTLC2-203ENST00000554901 ASB14A6NK59 587 aa18.8■□□□□ 0.6
SPTLC2-203ENST00000554901 CNTN2Q02246 1040 aa18.8■□□□□ 0.6
SPTLC2-203ENST00000554901 PRKCZQ05513 592 aa18.8■□□□□ 0.6
SPTLC2-203ENST00000554901 OTOP1Q7RTM1 612 aa18.8■□□□□ 0.6
SPTLC2-203ENST00000554901 FCHSD1Q86WN1 690 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms