RNA–Protein interactions for RNA: ENST00000554844.1

TMEM253-204, Transcript of transmembrane protein 253, humanhuman

TSL 4

Gene TMEM253, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-204ENST00000554844 PCDHA11Q9Y5I1 949 aa11.43□□□□□ -0.58
TMEM253-204ENST00000554844 SPTBN5Q9NRC6 3674 aaKnown RBP11.43□□□□□ -0.58
TMEM253-204ENST00000554844 ASTN1O14525 1302 aa11.42□□□□□ -0.58
TMEM253-204ENST00000554844 UMODL1Q5DID0 1318 aa11.42□□□□□ -0.58
TMEM253-204ENST00000554844 CTAGE5O15320 804 aa11.42□□□□□ -0.58
TMEM253-204ENST00000554844 MYL3P08590 195 aa11.42□□□□□ -0.58
TMEM253-204ENST00000554844 RABGGTBP53611 331 aa11.42□□□□□ -0.58
TMEM253-204ENST00000554844 PSMC6P62333 389 aa11.42□□□□□ -0.58
TMEM253-204ENST00000554844 PLCB2Q00722 1185 aa11.42□□□□□ -0.58
TMEM253-204ENST00000554844 ADGRE1Q14246 886 aa11.42□□□□□ -0.58
TMEM253-204ENST00000554844 FAM47CQ5HY64 1035 aa11.42□□□□□ -0.58
TMEM253-204ENST00000554844 TSHZ3Q63HK5 1081 aa11.42□□□□□ -0.58
TMEM253-204ENST00000554844 TRPV6Q9H1D0 765 aa11.42□□□□□ -0.58
TMEM253-204ENST00000554844 TOMM22Q9NS69 142 aa11.42□□□□□ -0.58
TMEM253-204ENST00000554844 CYP39A1Q9NYL5 469 aa11.42□□□□□ -0.58
TMEM253-204ENST00000554844 PRR12Q9ULL5 1215 aa11.42□□□□□ -0.58
TMEM253-204ENST00000554844 YBX2Q9Y2T7 364 aaKnown RBP11.42□□□□□ -0.58
TMEM253-204ENST00000554844 TTC41PQ6P2S7 1318 aa11.41□□□□□ -0.58
TMEM253-204ENST00000554844 LRRC37A2A6NM11 1700 aa11.41□□□□□ -0.58
TMEM253-204ENST00000554844 PTPDC1A2A3K4 754 aa11.41□□□□□ -0.58
TMEM253-204ENST00000554844 B4DLN1 442 aa11.41□□□□□ -0.58
TMEM253-204ENST00000554844 KIF28PB7ZC32 967 aa11.41□□□□□ -0.58
TMEM253-204ENST00000554844 RANBP6O60518 1105 aaKnown RBP11.41□□□□□ -0.58
TMEM253-204ENST00000554844 ICAM1P05362 532 aa11.41□□□□□ -0.58
TMEM253-204ENST00000554844 MRPL12P52815 198 aaKnown RBP11.41□□□□□ -0.58
TMEM253-204ENST00000554844 SNAP25P60880 206 aa11.41□□□□□ -0.58
TMEM253-204ENST00000554844 TMEM67Q5HYA8 995 aa11.41□□□□□ -0.58
TMEM253-204ENST00000554844 DEFB128Q7Z7B8 93 aa11.41□□□□□ -0.58
TMEM253-204ENST00000554844 RETREG2Q8NC44 543 aa11.41□□□□□ -0.58
TMEM253-204ENST00000554844 OR6J1Q8NGC5 347 aa11.41□□□□□ -0.58
TMEM253-204ENST00000554844 DCAF4Q8WV16 495 aa11.41□□□□□ -0.58
TMEM253-204ENST00000554844 SCLYQ96I15 445 aa11.41□□□□□ -0.58
TMEM253-204ENST00000554844 WDR11Q9BZH6 1224 aa11.41□□□□□ -0.58
TMEM253-204ENST00000554844 WNT8AQ9H1J5 351 aa11.41□□□□□ -0.58
TMEM253-204ENST00000554844 ALDH8A1Q9H2A2 487 aaPredicted RBP11.41□□□□□ -0.58
TMEM253-204ENST00000554844 PDGFCQ9NRA1 345 aa11.41□□□□□ -0.58
TMEM253-204ENST00000554844 PNMA2Q9UL42 364 aa11.41□□□□□ -0.58
TMEM253-204ENST00000554844 NOD1Q9Y239 953 aa11.41□□□□□ -0.58
TMEM253-204ENST00000554844 GBF1Q92538 1859 aa11.4□□□□□ -0.58
TMEM253-204ENST00000554844 ZNF536O15090 1300 aa11.4□□□□□ -0.58
TMEM253-204ENST00000554844 TNKSO95271 1327 aa11.4□□□□□ -0.58
TMEM253-204ENST00000554844 LOC102724159A0A0B4J2E5 919 aa11.4□□□□□ -0.58
TMEM253-204ENST00000554844 RFC2P35250 354 aa11.4□□□□□ -0.58
TMEM253-204ENST00000554844 ALDH5A1P51649 535 aaPredicted RBP11.4□□□□□ -0.58
TMEM253-204ENST00000554844 PPP2R5BQ15173 497 aa11.4□□□□□ -0.58
TMEM253-204ENST00000554844 PWP2Q15269 919 aaKnown RBP11.4□□□□□ -0.58
TMEM253-204ENST00000554844 DUSP28Q4G0W2 176 aa11.4□□□□□ -0.58
TMEM253-204ENST00000554844 MUM1L1Q5H9M0 696 aa11.4□□□□□ -0.58
TMEM253-204ENST00000554844 TAPT1Q6NXT6 567 aa11.4□□□□□ -0.58
TMEM253-204ENST00000554844 SLC9A7Q96T83 725 aa11.4□□□□□ -0.58
TMEM253-204ENST00000554844 MTG1Q9BT17 334 aaPredicted RBP11.4□□□□□ -0.58
TMEM253-204ENST00000554844 FTOQ9C0B1 505 aaKnown RBP eCLIP11.4□□□□□ -0.58
TMEM253-204ENST00000554844 DCTPP1Q9H773 170 aa11.4□□□□□ -0.58
TMEM253-204ENST00000554844 NKRFO15226 690 aaKnown RBP eCLIP11.39□□□□□ -0.59
TMEM253-204ENST00000554844 KPNA6O60684 536 aa11.39□□□□□ -0.59
TMEM253-204ENST00000554844 CYP2C9P11712 490 aa11.39□□□□□ -0.59
TMEM253-204ENST00000554844 CALML3P27482 149 aa11.39□□□□□ -0.59
TMEM253-204ENST00000554844 CTDSPL2Q05D32 466 aa11.39□□□□□ -0.59
TMEM253-204ENST00000554844 PDE4DQ08499 809 aa11.39□□□□□ -0.59
TMEM253-204ENST00000554844 BFSP2Q13515 415 aa11.39□□□□□ -0.59
TMEM253-204ENST00000554844 BAATQ14032 418 aaPredicted RBP11.39□□□□□ -0.59
TMEM253-204ENST00000554844 SYDE2Q5VT97 1194 aa11.39□□□□□ -0.59
TMEM253-204ENST00000554844 CCDC155Q8N6L0 562 aa11.39□□□□□ -0.59
TMEM253-204ENST00000554844 FAM122AQ96E09 287 aa11.39□□□□□ -0.59
TMEM253-204ENST00000554844 SEC62Q99442 399 aaKnown RBP11.39□□□□□ -0.59
TMEM253-204ENST00000554844 C1QTNF1Q9BXJ1 281 aa11.39□□□□□ -0.59
TMEM253-204ENST00000554844 TRMT13Q9NUP7 481 aaKnown RBP11.39□□□□□ -0.59
TMEM253-204ENST00000554844 NCOR1O75376 2440 aa11.39□□□□□ -0.59
TMEM253-204ENST00000554844 GRIN2DO15399 1336 aa11.38□□□□□ -0.59
TMEM253-204ENST00000554844 CA3P07451 260 aa11.38□□□□□ -0.59
TMEM253-204ENST00000554844 MYOGP15173 224 aa11.38□□□□□ -0.59
TMEM253-204ENST00000554844 KCNJ6P48051 423 aa11.38□□□□□ -0.59
TMEM253-204ENST00000554844 PURAQ00577 322 aaKnown RBP11.38□□□□□ -0.59
TMEM253-204ENST00000554844 TTLL4Q14679 1199 aa11.38□□□□□ -0.59
TMEM253-204ENST00000554844 ZMYM1Q5SVZ6 1142 aa11.38□□□□□ -0.59
TMEM253-204ENST00000554844 DIEXFQ68CQ4 756 aaKnown RBP11.38□□□□□ -0.59
TMEM253-204ENST00000554844 RNF207Q6ZRF8 634 aa11.38□□□□□ -0.59
TMEM253-204ENST00000554844 PHOSPHO2Q8TCD6 241 aa11.38□□□□□ -0.59
TMEM253-204ENST00000554844 MORC4Q8TE76 937 aa11.38□□□□□ -0.59
TMEM253-204ENST00000554844 BBXQ8WY36 941 aaPredicted RBP11.38□□□□□ -0.59
TMEM253-204ENST00000554844 RANBP17Q9H2T7 1088 aaKnown RBP11.38□□□□□ -0.59
TMEM253-204ENST00000554844 COG5Q9UP83 839 aa11.38□□□□□ -0.59
TMEM253-204ENST00000554844 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.38□□□□□ -0.59
TMEM253-204ENST00000554844 DDX49Q9Y6V7 483 aaKnown RBP11.38□□□□□ -0.59
TMEM253-204ENST00000554844 NMT2O60551 498 aa11.37□□□□□ -0.59
TMEM253-204ENST00000554844 TOP1P11387 765 aaKnown RBP11.37□□□□□ -0.59
TMEM253-204ENST00000554844 PTGS1P23219 599 aa11.37□□□□□ -0.59
TMEM253-204ENST00000554844 SLC16A2P36021 539 aa11.37□□□□□ -0.59
TMEM253-204ENST00000554844 CHMP4BP1P59074 171 aa11.37□□□□□ -0.59
TMEM253-204ENST00000554844 PTPN11Q06124 597 aaPredicted RBP11.37□□□□□ -0.59
TMEM253-204ENST00000554844 NBPF20Q3BBV1 942 aa11.37□□□□□ -0.59
TMEM253-204ENST00000554844 RRP12Q5JTH9 1297 aaKnown RBP11.37□□□□□ -0.59
TMEM253-204ENST00000554844 NFRKBQ6P4R8 1299 aa11.37□□□□□ -0.59
TMEM253-204ENST00000554844 SCFD2Q8WU76 684 aa11.37□□□□□ -0.59
TMEM253-204ENST00000554844 GPCPD1Q9NPB8 672 aa11.37□□□□□ -0.59
TMEM253-204ENST00000554844 FRMPD2Q68DX3 1309 aaPredicted RBP11.36□□□□□ -0.59
TMEM253-204ENST00000554844 NFIBO00712 420 aa11.36□□□□□ -0.59
TMEM253-204ENST00000554844 ORC4O43929 436 aa11.36□□□□□ -0.59
TMEM253-204ENST00000554844 BAIAP3O94812 1187 aa11.36□□□□□ -0.59
TMEM253-204ENST00000554844 MX1P20591 662 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms