RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 PFKMP08237 780 aa28.57■■■□□ 2.16
FOXA1-204ENST00000554607 CPT1AP50416 773 aa28.57■■■□□ 2.16
FOXA1-204ENST00000554607 ALDH5A1P51649 535 aaPredicted RBP28.57■■■□□ 2.16
FOXA1-204ENST00000554607 MRPS5P82675 430 aaKnown RBP28.57■■■□□ 2.16
FOXA1-204ENST00000554607 PURBQ96QR8 312 aaKnown RBP28.57■■■□□ 2.16
FOXA1-204ENST00000554607 WDR11Q9BZH6 1224 aa28.57■■■□□ 2.16
FOXA1-204ENST00000554607 YBX2Q9Y2T7 364 aaKnown RBP28.57■■■□□ 2.16
FOXA1-204ENST00000554607 FGRP09769 529 aa28.56■■■□□ 2.16
FOXA1-204ENST00000554607 ALX1Q15699 326 aa28.56■■■□□ 2.16
FOXA1-204ENST00000554607 CCDC85BQ15834 202 aaPredicted RBP28.56■■■□□ 2.16
FOXA1-204ENST00000554607 TMEM63BQ5T3F8 832 aa28.56■■■□□ 2.16
FOXA1-204ENST00000554607 SYDE2Q5VT97 1194 aa28.56■■■□□ 2.16
FOXA1-204ENST00000554607 RASGRP2Q7LDG7 609 aa28.56■■■□□ 2.16
FOXA1-204ENST00000554607 ZBTB47Q9UFB7 747 aaPredicted RBP28.56■■■□□ 2.16
FOXA1-204ENST00000554607 PCDHB15Q9Y5E8 787 aa28.56■■■□□ 2.16
FOXA1-204ENST00000554607 PCDHA11Q9Y5I1 949 aa28.56■■■□□ 2.16
FOXA1-204ENST00000554607 TOP1P11387 765 aaKnown RBP28.55■■■□□ 2.16
FOXA1-204ENST00000554607 SLC16A2P36021 539 aa28.55■■■□□ 2.16
FOXA1-204ENST00000554607 BRDTQ58F21 947 aaPredicted RBP28.55■■■□□ 2.16
FOXA1-204ENST00000554607 TTBK2Q6IQ55 1244 aa28.55■■■□□ 2.16
FOXA1-204ENST00000554607 EVI5LQ96CN4 794 aa28.55■■■□□ 2.16
FOXA1-204ENST00000554607 MPHOSPH6Q99547 160 aaKnown RBP28.55■■■□□ 2.16
FOXA1-204ENST00000554607 TSPYL2Q9H2G4 693 aaPredicted RBP28.55■■■□□ 2.16
FOXA1-204ENST00000554607 GPHNQ9NQX3 736 aaPredicted RBP28.55■■■□□ 2.16
FOXA1-204ENST00000554607 TOMM22Q9NS69 142 aa28.55■■■□□ 2.16
FOXA1-204ENST00000554607 RBM47A0AV96 593 aaKnown RBP28.54■■■□□ 2.16
FOXA1-204ENST00000554607 PTPDC1A2A3K4 754 aa28.54■■■□□ 2.16
FOXA1-204ENST00000554607 ZBBXA8MT70 800 aa28.54■■■□□ 2.16
FOXA1-204ENST00000554607 VPS53Q5VIR6 699 aa28.54■■■□□ 2.16
FOXA1-204ENST00000554607 PPP2R2DQ66LE6 453 aa28.54■■■□□ 2.16
FOXA1-204ENST00000554607 IL27Q8NEV9 243 aa28.54■■■□□ 2.16
FOXA1-204ENST00000554607 SCLYQ96I15 445 aa28.54■■■□□ 2.16
FOXA1-204ENST00000554607 HELLSQ9NRZ9 838 aa28.54■■■□□ 2.16
FOXA1-204ENST00000554607 TNKSO95271 1327 aa28.53■■■□□ 2.16
FOXA1-204ENST00000554607 RABGGTBP53611 331 aa28.53■■■□□ 2.16
FOXA1-204ENST00000554607 PURAQ00577 322 aaKnown RBP28.53■■■□□ 2.16
FOXA1-204ENST00000554607 TMEM47Q9BQJ4 181 aa28.53■■■□□ 2.16
FOXA1-204ENST00000554607 MTG1Q9BT17 334 aaPredicted RBP28.53■■■□□ 2.16
FOXA1-204ENST00000554607 TCP11L1Q9NUJ3 509 aa28.53■■■□□ 2.16
FOXA1-204ENST00000554607 RAD50Q92878 1312 aa28.52■■■□□ 2.16
FOXA1-204ENST00000554607 NFIBO00712 420 aa28.52■■■□□ 2.16
FOXA1-204ENST00000554607 NKRFO15226 690 aaKnown RBP eCLIP28.52■■■□□ 2.16
FOXA1-204ENST00000554607 MYL3P08590 195 aa28.52■■■□□ 2.16
FOXA1-204ENST00000554607 ATP2A2P16615 1042 aaKnown RBP28.52■■■□□ 2.16
FOXA1-204ENST00000554607 OR6J1Q8NGC5 347 aa28.52■■■□□ 2.16
FOXA1-204ENST00000554607 TRMT13Q9NUP7 481 aaKnown RBP28.52■■■□□ 2.16
FOXA1-204ENST00000554607 LCTP09848 1927 aa28.51■■■□□ 2.16
FOXA1-204ENST00000554607 GBF1Q92538 1859 aa28.51■■■□□ 2.15
FOXA1-204ENST00000554607 KPNA6O60684 536 aa28.51■■■□□ 2.15
FOXA1-204ENST00000554607 RRP12Q5JTH9 1297 aaKnown RBP28.51■■■□□ 2.15
FOXA1-204ENST00000554607 RNF207Q6ZRF8 634 aa28.51■■■□□ 2.15
FOXA1-204ENST00000554607 ADAMTS19Q8TE59 1207 aa28.51■■■□□ 2.15
FOXA1-204ENST00000554607 GPCPD1Q9NPB8 672 aa28.51■■■□□ 2.15
FOXA1-204ENST00000554607 MUC3AQ02505 3323 aa28.5■■■□□ 2.15
FOXA1-204ENST00000554607 FRMPD2Q68DX3 1309 aaPredicted RBP28.5■■■□□ 2.15
FOXA1-204ENST00000554607 SALL3Q9BXA9 1300 aa28.5■■■□□ 2.15
FOXA1-204ENST00000554607 B4DLN1 442 aa28.5■■■□□ 2.15
FOXA1-204ENST00000554607 CYP2C9P11712 490 aa28.5■■■□□ 2.15
FOXA1-204ENST00000554607 ACTN1P12814 892 aa28.5■■■□□ 2.15
FOXA1-204ENST00000554607 CALML3P27482 149 aa28.5■■■□□ 2.15
FOXA1-204ENST00000554607 MRPL12P52815 198 aaKnown RBP28.5■■■□□ 2.15
FOXA1-204ENST00000554607 PDE4DQ08499 809 aa28.5■■■□□ 2.15
FOXA1-204ENST00000554607 TICAM2Q86XR7 235 aa28.5■■■□□ 2.15
FOXA1-204ENST00000554607 VWCEQ96DN2 955 aa28.5■■■□□ 2.15
FOXA1-204ENST00000554607 FGAP02671 866 aa28.49■■■□□ 2.15
FOXA1-204ENST00000554607 RFC2P35250 354 aa28.49■■■□□ 2.15
FOXA1-204ENST00000554607 CLEC4DQ8WXI8 215 aa28.49■■■□□ 2.15
FOXA1-204ENST00000554607 TTC14Q96N46 770 aa28.49■■■□□ 2.15
FOXA1-204ENST00000554607 MYOGP15173 224 aa28.48■■■□□ 2.15
FOXA1-204ENST00000554607 TTLL4Q14679 1199 aa28.48■■■□□ 2.15
FOXA1-204ENST00000554607 PPP2R5BQ15173 497 aa28.48■■■□□ 2.15
FOXA1-204ENST00000554607 MCMDC2Q4G0Z9 681 aa28.48■■■□□ 2.15
FOXA1-204ENST00000554607 FAM47CQ5HY64 1035 aa28.48■■■□□ 2.15
FOXA1-204ENST00000554607 TMEM67Q5HYA8 995 aa28.48■■■□□ 2.15
FOXA1-204ENST00000554607 NFRKBQ6P4R8 1299 aa28.48■■■□□ 2.15
FOXA1-204ENST00000554607 DNERQ8NFT8 737 aa28.48■■■□□ 2.15
FOXA1-204ENST00000554607 SCFD2Q8WU76 684 aa28.48■■■□□ 2.15
FOXA1-204ENST00000554607 CHD7Q9P2D1 2997 aa28.47■■■□□ 2.15
FOXA1-204ENST00000554607 PDHBP11177 359 aa28.47■■■□□ 2.15
FOXA1-204ENST00000554607 PTPN11Q06124 597 aaPredicted RBP28.47■■■□□ 2.15
FOXA1-204ENST00000554607 NBPF20Q3BBV1 942 aa28.47■■■□□ 2.15
FOXA1-204ENST00000554607 ANKRD45Q5TZF3 282 aa28.47■■■□□ 2.15
FOXA1-204ENST00000554607 SLC30A10Q6XR72 485 aa28.47■■■□□ 2.15
FOXA1-204ENST00000554607 DEFB128Q7Z7B8 93 aa28.47■■■□□ 2.15
FOXA1-204ENST00000554607 RETREG2Q8NC44 543 aa28.47■■■□□ 2.15
FOXA1-204ENST00000554607 UHRF1Q96T88 793 aaPredicted RBP28.47■■■□□ 2.15
FOXA1-204ENST00000554607 WDR19Q8NEZ3 1342 aa28.46■■■□□ 2.15
FOXA1-204ENST00000554607 PCP11498 1178 aaKnown RBP28.46■■■□□ 2.15
FOXA1-204ENST00000554607 RPS6P62753 249 aaKnown RBP28.46■■■□□ 2.15
FOXA1-204ENST00000554607 PHOSPHO2Q8TCD6 241 aa28.46■■■□□ 2.15
FOXA1-204ENST00000554607 A6NJR5 290 aa28.45■■■□□ 2.14
FOXA1-204ENST00000554607 PITPNM1O00562 1244 aa28.45■■■□□ 2.14
FOXA1-204ENST00000554607 COL9A1P20849 921 aa28.45■■■□□ 2.14
FOXA1-204ENST00000554607 EDNRBP24530 442 aa28.45■■■□□ 2.14
FOXA1-204ENST00000554607 ZNF543Q08ER8 600 aa28.45■■■□□ 2.14
FOXA1-204ENST00000554607 SLC9A7Q96T83 725 aa28.45■■■□□ 2.14
FOXA1-204ENST00000554607 ZMYM6O95789 1325 aa28.44■■■□□ 2.14
FOXA1-204ENST00000554607 BFSP2Q13515 415 aa28.44■■■□□ 2.14
FOXA1-204ENST00000554607 AAK1Q2M2I8 961 aa28.44■■■□□ 2.14
FOXA1-204ENST00000554607 MICALL1Q8N3F8 863 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms