RNA–Protein interactions for RNA: ENST00000554158.1

ACTN1-212, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-212ENST00000554158 PCDHA11Q9Y5I1 949 aa9.66□□□□□ -0.86
ACTN1-212ENST00000554158 TANC1Q9C0D5 1861 aa9.66□□□□□ -0.86
ACTN1-212ENST00000554158 LCTP09848 1927 aa9.65□□□□□ -0.86
ACTN1-212ENST00000554158 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.65□□□□□ -0.86
ACTN1-212ENST00000554158 TSPY2A6NKD2 308 aa9.65□□□□□ -0.86
ACTN1-212ENST00000554158 B4DLN1 442 aa9.65□□□□□ -0.86
ACTN1-212ENST00000554158 PATL2C9JE40 543 aaKnown RBP9.65□□□□□ -0.86
ACTN1-212ENST00000554158 ADCY6O43306 1168 aa9.65□□□□□ -0.86
ACTN1-212ENST00000554158 CHGBP05060 677 aa9.65□□□□□ -0.86
ACTN1-212ENST00000554158 CPT1AP50416 773 aa9.65□□□□□ -0.86
ACTN1-212ENST00000554158 MRPL12P52815 198 aaKnown RBP9.65□□□□□ -0.86
ACTN1-212ENST00000554158 RABGGTBP53611 331 aa9.65□□□□□ -0.86
ACTN1-212ENST00000554158 TFAP4Q01664 338 aa9.65□□□□□ -0.86
ACTN1-212ENST00000554158 CCDC96Q2M329 555 aa9.65□□□□□ -0.86
ACTN1-212ENST00000554158 FBXO16Q8IX29 292 aaPredicted RBP9.65□□□□□ -0.86
ACTN1-212ENST00000554158 FAM133AQ8N9E0 248 aa9.65□□□□□ -0.86
ACTN1-212ENST00000554158 ZNF579Q8NAF0 562 aaKnown RBP9.65□□□□□ -0.86
ACTN1-212ENST00000554158 NEDD1Q8NHV4 660 aa9.65□□□□□ -0.86
ACTN1-212ENST00000554158 AGBL1Q96MI9 1066 aa9.65□□□□□ -0.86
ACTN1-212ENST00000554158 NOC4LQ9BVI4 516 aaKnown RBP9.65□□□□□ -0.86
ACTN1-212ENST00000554158 FTOQ9C0B1 505 aaKnown RBP eCLIP9.65□□□□□ -0.86
ACTN1-212ENST00000554158 TRPV6Q9H1D0 765 aa9.65□□□□□ -0.86
ACTN1-212ENST00000554158 VTA1Q9NP79 307 aa9.65□□□□□ -0.86
ACTN1-212ENST00000554158 CXXC1Q9P0U4 656 aaPredicted RBP9.65□□□□□ -0.86
ACTN1-212ENST00000554158 HCN4Q9Y3Q4 1203 aa9.65□□□□□ -0.86
ACTN1-212ENST00000554158 ERC2O15083 957 aa9.64□□□□□ -0.87
ACTN1-212ENST00000554158 SMARCA5O60264 1052 aaPredicted RBP9.64□□□□□ -0.87
ACTN1-212ENST00000554158 B4GALT4O60513 344 aa9.64□□□□□ -0.87
ACTN1-212ENST00000554158 MYL3P08590 195 aa9.64□□□□□ -0.87
ACTN1-212ENST00000554158 SMPD1P17405 629 aa9.64□□□□□ -0.87
ACTN1-212ENST00000554158 MCCP23508 829 aa9.64□□□□□ -0.87
ACTN1-212ENST00000554158 CHMP4BP1P59074 171 aa9.64□□□□□ -0.87
ACTN1-212ENST00000554158 PSMC6P62333 389 aa9.64□□□□□ -0.87
ACTN1-212ENST00000554158 NKX3-2P78367 333 aa9.64□□□□□ -0.87
ACTN1-212ENST00000554158 ADGRE1Q14246 886 aa9.64□□□□□ -0.87
ACTN1-212ENST00000554158 DEFB128Q7Z7B8 93 aa9.64□□□□□ -0.87
ACTN1-212ENST00000554158 IFNL3Q8IZI9 196 aa9.64□□□□□ -0.87
ACTN1-212ENST00000554158 CCDC155Q8N6L0 562 aa9.64□□□□□ -0.87
ACTN1-212ENST00000554158 OSBP2Q969R2 916 aa9.64□□□□□ -0.87
ACTN1-212ENST00000554158 SCLYQ96I15 445 aa9.64□□□□□ -0.87
ACTN1-212ENST00000554158 GMCL1Q96IK5 515 aa9.64□□□□□ -0.87
ACTN1-212ENST00000554158 FSD1Q9BTV5 496 aa9.64□□□□□ -0.87
ACTN1-212ENST00000554158 TOMM22Q9NS69 142 aa9.64□□□□□ -0.87
ACTN1-212ENST00000554158 GNEQ9Y223 722 aaKnown RBP9.64□□□□□ -0.87
ACTN1-212ENST00000554158 YBX2Q9Y2T7 364 aaKnown RBP9.64□□□□□ -0.87
ACTN1-212ENST00000554158 KIAA1217Q5T5P2 1943 aa9.64□□□□□ -0.87
ACTN1-212ENST00000554158 PLIN4Q96Q06 1357 aa9.63□□□□□ -0.87
ACTN1-212ENST00000554158 TNKSO95271 1327 aa9.63□□□□□ -0.87
ACTN1-212ENST00000554158 UMODL1Q5DID0 1318 aa9.63□□□□□ -0.87
ACTN1-212ENST00000554158 SCN10AQ9Y5Y9 1956 aa9.63□□□□□ -0.87
ACTN1-212ENST00000554158 IGKV6D-41A0A0C4DH26 115 aa9.63□□□□□ -0.87
ACTN1-212ENST00000554158 PTPDC1A2A3K4 754 aa9.63□□□□□ -0.87
ACTN1-212ENST00000554158 SOWAHBA6NEL2 793 aa9.63□□□□□ -0.87
ACTN1-212ENST00000554158 RANBP6O60518 1105 aaKnown RBP9.63□□□□□ -0.87
ACTN1-212ENST00000554158 KPNA6O60684 536 aa9.63□□□□□ -0.87
ACTN1-212ENST00000554158 RFC2P35250 354 aa9.63□□□□□ -0.87
ACTN1-212ENST00000554158 PLA2G5P39877 138 aa9.63□□□□□ -0.87
ACTN1-212ENST00000554158 KCNJ6P48051 423 aa9.63□□□□□ -0.87
ACTN1-212ENST00000554158 PPARAQ07869 468 aa9.63□□□□□ -0.87
ACTN1-212ENST00000554158 PDE4DQ08499 809 aa9.63□□□□□ -0.87
ACTN1-212ENST00000554158 BFSP2Q13515 415 aa9.63□□□□□ -0.87
ACTN1-212ENST00000554158 RCSD1Q6JBY9 416 aa9.63□□□□□ -0.87
ACTN1-212ENST00000554158 KCTD1Q719H9 257 aa9.63□□□□□ -0.87
ACTN1-212ENST00000554158 SIRT2Q8IXJ6 389 aa9.63□□□□□ -0.87
ACTN1-212ENST00000554158 SLC43A3Q8NBI5 491 aa9.63□□□□□ -0.87
ACTN1-212ENST00000554158 OR6J1Q8NGC5 347 aa9.63□□□□□ -0.87
ACTN1-212ENST00000554158 FGD4Q96M96 766 aa9.63□□□□□ -0.87
ACTN1-212ENST00000554158 SLC9A7Q96T83 725 aa9.63□□□□□ -0.87
ACTN1-212ENST00000554158 MTG1Q9BT17 334 aaPredicted RBP9.63□□□□□ -0.87
ACTN1-212ENST00000554158 WDR11Q9BZH6 1224 aa9.63□□□□□ -0.87
ACTN1-212ENST00000554158 KATNBL1Q9H079 304 aa9.63□□□□□ -0.87
ACTN1-212ENST00000554158 ALDH8A1Q9H2A2 487 aaPredicted RBP9.63□□□□□ -0.87
ACTN1-212ENST00000554158 CYP39A1Q9NYL5 469 aa9.63□□□□□ -0.87
ACTN1-212ENST00000554158 PNMA2Q9UL42 364 aa9.63□□□□□ -0.87
ACTN1-212ENST00000554158 COG5Q9UP83 839 aa9.63□□□□□ -0.87
ACTN1-212ENST00000554158 SPTBN5Q9NRC6 3674 aaKnown RBP9.62□□□□□ -0.87
ACTN1-212ENST00000554158 ASTN1O14525 1302 aa9.62□□□□□ -0.87
ACTN1-212ENST00000554158 KAT6AQ92794 2004 aa9.62□□□□□ -0.87
ACTN1-212ENST00000554158 M0R2C6 588 aa9.62□□□□□ -0.87
ACTN1-212ENST00000554158 CTAGE5O15320 804 aa9.62□□□□□ -0.87
ACTN1-212ENST00000554158 PLA2G6O60733 806 aa9.62□□□□□ -0.87
ACTN1-212ENST00000554158 CA3P07451 260 aa9.62□□□□□ -0.87
ACTN1-212ENST00000554158 PPP2R5BQ15173 497 aa9.62□□□□□ -0.87
ACTN1-212ENST00000554158 DUSP28Q4G0W2 176 aa9.62□□□□□ -0.87
ACTN1-212ENST00000554158 DCAF4Q8WV16 495 aa9.62□□□□□ -0.87
ACTN1-212ENST00000554158 ARNTL2Q8WYA1 636 aa9.62□□□□□ -0.87
ACTN1-212ENST00000554158 CRBNQ96SW2 442 aa9.62□□□□□ -0.87
ACTN1-212ENST00000554158 ZBED2Q9BTP6 218 aa9.62□□□□□ -0.87
ACTN1-212ENST00000554158 WNT8AQ9H1J5 351 aa9.62□□□□□ -0.87
ACTN1-212ENST00000554158 EPB41L4AQ9HCS5 686 aaPredicted RBP9.62□□□□□ -0.87
ACTN1-212ENST00000554158 PDGFCQ9NRA1 345 aa9.62□□□□□ -0.87
ACTN1-212ENST00000554158 PRR12Q9ULL5 1215 aa9.62□□□□□ -0.87
ACTN1-212ENST00000554158 TET1Q8NFU7 2136 aa9.62□□□□□ -0.87
ACTN1-212ENST00000554158 LOC102724159A0A0B4J2E5 919 aa9.61□□□□□ -0.87
ACTN1-212ENST00000554158 NKRFO15226 690 aaKnown RBP eCLIP9.61□□□□□ -0.87
ACTN1-212ENST00000554158 ICAM1P05362 532 aa9.61□□□□□ -0.87
ACTN1-212ENST00000554158 CYP2C9P11712 490 aa9.61□□□□□ -0.87
ACTN1-212ENST00000554158 MYOGP15173 224 aa9.61□□□□□ -0.87
ACTN1-212ENST00000554158 CALML3P27482 149 aa9.61□□□□□ -0.87
ACTN1-212ENST00000554158 PSEN1P49768 467 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms