RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 ANKRD13BQ86YJ7 626 aa4.55□□□□□ -1.68
RDH11-204ENST00000553578 EDEM1Q92611 657 aa4.55□□□□□ -1.68
RDH11-204ENST00000553578 SCYL1Q96KG9 808 aa4.55□□□□□ -1.68
RDH11-204ENST00000553578 JPH2Q9BR39 696 aaPredicted RBP4.55□□□□□ -1.68
RDH11-204ENST00000553578 TEX13AQ9BXU3 409 aaPredicted RBP4.55□□□□□ -1.68
RDH11-204ENST00000553578 SRCIN1Q9C0H9 1055 aa4.55□□□□□ -1.68
RDH11-204ENST00000553578 USP44Q9H0E7 712 aa4.55□□□□□ -1.68
RDH11-204ENST00000553578 CNNM2Q9H8M5 875 aa4.55□□□□□ -1.68
RDH11-204ENST00000553578 CWC25Q9NXE8 425 aaPredicted RBP4.55□□□□□ -1.68
RDH11-204ENST00000553578 NRBP1Q9UHY1 535 aa4.55□□□□□ -1.68
RDH11-204ENST00000553578 KPNA6O60684 536 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 TIPRLO75663 272 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 SNUPNO95149 360 aaKnown RBP4.54□□□□□ -1.68
RDH11-204ENST00000553578 PYGLP06737 847 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 MAGEA8P43361 318 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 SNX1Q13596 522 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 SKIDA1Q1XH10 827 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 SEZ6Q53EL9 994 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 DZIP1Q86YF9 867 aaKnown RBP4.54□□□□□ -1.68
RDH11-204ENST00000553578 HOMER1Q86YM7 354 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 PGBD3Q8N328 593 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 C17orf50Q8WW18 174 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 ZBTB10Q96DT7 871 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 YIPF2Q9BWQ6 316 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 DDX21Q9NR30 783 aaKnown RBP eCLIP4.54□□□□□ -1.68
RDH11-204ENST00000553578 HYPKQ9NX55 129 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 MAP3K20Q9NYL2 800 aaKnown RBP4.54□□□□□ -1.68
RDH11-204ENST00000553578 UBAP1Q9NZ09 502 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 CD2APQ9Y5K6 639 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 BPNT1O95861 308 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 GNAI3P08754 354 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 RAG1P15918 1043 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 ELF1P32519 619 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 ATP6V1E1P36543 226 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 RNF144AP50876 292 aaPredicted RBP4.54□□□□□ -1.68
RDH11-204ENST00000553578 RPS6KA3P51812 740 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 CENPCQ03188 943 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 LMBRD2Q68DH5 695 aaPredicted RBP4.54□□□□□ -1.68
RDH11-204ENST00000553578 AMOTL1Q8IY63 956 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 CPXCR1Q8N123 301 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 MYO1HQ8N1T3 1032 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 CCDC89Q8N998 374 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 CTCFLQ8NI51 663 aaPredicted RBP4.54□□□□□ -1.68
RDH11-204ENST00000553578 ATRIPQ8WXE1 791 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 LZTS2Q9BRK4 669 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.54□□□□□ -1.68
RDH11-204ENST00000553578 GNL3LQ9NVN8 582 aaKnown RBP4.54□□□□□ -1.68
RDH11-204ENST00000553578 BTAF1O14981 1849 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 EIF3CLB5ME19 914 aaKnown RBP4.54□□□□□ -1.68
RDH11-204ENST00000553578 FOXO3O43524 673 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 PRPF40AO75400 957 aaKnown RBP4.54□□□□□ -1.68
RDH11-204ENST00000553578 SCGB1D2O95969 90 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 IVLP07476 585 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 CLNS1AP54105 237 aaKnown RBP4.54□□□□□ -1.68
RDH11-204ENST00000553578 INHBEP58166 350 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 STK3Q13188 491 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 COL9A2Q14055 689 aaPredicted RBP4.54□□□□□ -1.68
RDH11-204ENST00000553578 NEDD9Q14511 834 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 TPTE2Q6XPS3 522 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 CDC37L1Q7L3B6 337 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 NBPF15Q8N660 670 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 C1orf131Q8NDD1 294 aaKnown RBP4.54□□□□□ -1.68
RDH11-204ENST00000553578 UHMK1Q8TAS1 419 aaKnown RBP4.54□□□□□ -1.68
RDH11-204ENST00000553578 GOLGA5Q8TBA6 731 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 TIFAQ96CG3 184 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 PDLIM2Q96JY6 352 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 EIF3CQ99613 913 aaKnown RBP4.54□□□□□ -1.68
RDH11-204ENST00000553578 TGIF2Q9GZN2 237 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 PDRG1Q9NUG6 133 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 KBTBD4Q9NVX7 518 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 TMOD4Q9NZQ9 345 aa4.54□□□□□ -1.68
RDH11-204ENST00000553578 DBF4Q9UBU7 674 aaPredicted RBP4.54□□□□□ -1.68
RDH11-204ENST00000553578 NXF1Q9UBU9 619 aaKnown RBP4.54□□□□□ -1.68
RDH11-204ENST00000553578 DDX60LQ5H9U9 1706 aaKnown RBP4.54□□□□□ -1.68
RDH11-204ENST00000553578 A0A1B0GUA9 196 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 VDRP11473 427 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 CLDN10P78369 228 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 NAA25Q14CX7 972 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 MCM10Q7L590 875 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 TAS1R3Q7RTX0 852 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 JAMLQ86YT9 394 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 DRC7Q8IY82 874 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 FBXL16Q8N461 479 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 TDRD7Q8NHU6 1098 aaKnown RBP4.53□□□□□ -1.68
RDH11-204ENST00000553578 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.53□□□□□ -1.68
RDH11-204ENST00000553578 NUP133Q8WUM0 1156 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 CCDC8Q9H0W5 538 aaPredicted RBP4.53□□□□□ -1.68
RDH11-204ENST00000553578 ETNK1Q9HBU6 452 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 GPR108Q9NPR9 543 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 COPRSQ9NQ92 184 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 USP25Q9UHP3 1055 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 ZNF652Q9Y2D9 606 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 UBR3Q6ZT12 1888 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 ATRNO75882 1429 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 TNRC6CQ9HCJ0 1690 aaKnown RBP4.53□□□□□ -1.68
RDH11-204ENST00000553578 FOCADQ5VW36 1801 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.53□□□□□ -1.68
RDH11-204ENST00000553578 GOLGA6L19H0YKK7 550 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 CYP27B1O15528 508 aa4.53□□□□□ -1.68
RDH11-204ENST00000553578 MT-CO1P00395 513 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms