RNA–Protein interactions for RNA: ENST00000553444.1

HNRNPC-206, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-206ENST00000553444 PURBQ96QR8 312 aaKnown RBP13.91□□□□□ -0.18
HNRNPC-206ENST00000553444 POLR3EQ9NVU0 708 aa13.91□□□□□ -0.18
HNRNPC-206ENST00000553444 BAZ2AQ9UIF9 1905 aaKnown RBP13.9□□□□□ -0.18
HNRNPC-206ENST00000553444 LPXNO60711 386 aa13.9□□□□□ -0.18
HNRNPC-206ENST00000553444 GPR37L1O60883 481 aa13.9□□□□□ -0.18
HNRNPC-206ENST00000553444 TSPY3P0CV98 308 aa13.9□□□□□ -0.18
HNRNPC-206ENST00000553444 TSPY8P0CW00 308 aa13.9□□□□□ -0.18
HNRNPC-206ENST00000553444 GNAT2P19087 354 aa13.9□□□□□ -0.18
HNRNPC-206ENST00000553444 MCCP23508 829 aa13.9□□□□□ -0.18
HNRNPC-206ENST00000553444 SNAP25P60880 206 aa13.9□□□□□ -0.18
HNRNPC-206ENST00000553444 NSMFQ6X4W1 530 aa13.9□□□□□ -0.18
HNRNPC-206ENST00000553444 MTG1Q9BT17 334 aaPredicted RBP13.9□□□□□ -0.18
HNRNPC-206ENST00000553444 PRR12Q9ULL5 1215 aa13.9□□□□□ -0.18
HNRNPC-206ENST00000553444 KIF28PB7ZC32 967 aa13.89□□□□□ -0.19
HNRNPC-206ENST00000553444 M0R2C6 588 aa13.89□□□□□ -0.19
HNRNPC-206ENST00000553444 PITPNM1O00562 1244 aa13.89□□□□□ -0.19
HNRNPC-206ENST00000553444 RNF113AO15541 343 aaKnown RBP13.89□□□□□ -0.19
HNRNPC-206ENST00000553444 MYL3P08590 195 aa13.89□□□□□ -0.19
HNRNPC-206ENST00000553444 IQCF3P0C7M6 154 aa13.89□□□□□ -0.19
HNRNPC-206ENST00000553444 CPT1AP50416 773 aa13.89□□□□□ -0.19
HNRNPC-206ENST00000553444 TFAP4Q01664 338 aa13.89□□□□□ -0.19
HNRNPC-206ENST00000553444 KCTD1Q719H9 257 aa13.89□□□□□ -0.19
HNRNPC-206ENST00000553444 SPRED2Q7Z698 418 aa13.89□□□□□ -0.19
HNRNPC-206ENST00000553444 IFNL3Q8IZI9 196 aa13.89□□□□□ -0.19
HNRNPC-206ENST00000553444 CHMP4CQ96CF2 233 aa13.89□□□□□ -0.19
HNRNPC-206ENST00000553444 WDR11Q9BZH6 1224 aa13.89□□□□□ -0.19
HNRNPC-206ENST00000553444 ECHDC1Q9NTX5 307 aa13.89□□□□□ -0.19
HNRNPC-206ENST00000553444 CCPG1Q9ULG6 757 aa13.89□□□□□ -0.19
HNRNPC-206ENST00000553444 DDX19BQ9UMR2 479 aa13.89□□□□□ -0.19
HNRNPC-206ENST00000553444 REV3LO60673 3130 aa13.88□□□□□ -0.19
HNRNPC-206ENST00000553444 RBM47A0AV96 593 aaKnown RBP13.88□□□□□ -0.19
HNRNPC-206ENST00000553444 FAM86C2PA6NEL3 165 aa13.88□□□□□ -0.19
HNRNPC-206ENST00000553444 SMARCA5O60264 1052 aaPredicted RBP13.88□□□□□ -0.19
HNRNPC-206ENST00000553444 APPP05067 770 aa13.88□□□□□ -0.19
HNRNPC-206ENST00000553444 ALDH5A1P51649 535 aaPredicted RBP13.88□□□□□ -0.19
HNRNPC-206ENST00000553444 PDE4BQ07343 736 aa13.88□□□□□ -0.19
HNRNPC-206ENST00000553444 BAATQ14032 418 aaPredicted RBP13.88□□□□□ -0.19
HNRNPC-206ENST00000553444 NBPF20Q3BBV1 942 aa13.88□□□□□ -0.19
HNRNPC-206ENST00000553444 RCSD1Q6JBY9 416 aa13.88□□□□□ -0.19
HNRNPC-206ENST00000553444 NFRKBQ6P4R8 1299 aa13.88□□□□□ -0.19
HNRNPC-206ENST00000553444 RASGRP2Q7LDG7 609 aa13.88□□□□□ -0.19
HNRNPC-206ENST00000553444 RETREG2Q8NC44 543 aa13.88□□□□□ -0.19
HNRNPC-206ENST00000553444 OR6J1Q8NGC5 347 aa13.88□□□□□ -0.19
HNRNPC-206ENST00000553444 LRRCC1Q9C099 1032 aa13.88□□□□□ -0.19
HNRNPC-206ENST00000553444 FTOQ9C0B1 505 aaKnown RBP eCLIP13.88□□□□□ -0.19
HNRNPC-206ENST00000553444 CD320Q9NPF0 282 aa13.88□□□□□ -0.19
HNRNPC-206ENST00000553444 MUC6Q6W4X9 2439 aa13.88□□□□□ -0.19
HNRNPC-206ENST00000553444 LOC102724159A0A0B4J2E5 919 aa13.87□□□□□ -0.19
HNRNPC-206ENST00000553444 PATL2C9JE40 543 aaKnown RBP13.87□□□□□ -0.19
HNRNPC-206ENST00000553444 PI4K2BG5E9Z4 385 aa13.87□□□□□ -0.19
HNRNPC-206ENST00000553444 BAIAP3O94812 1187 aa13.87□□□□□ -0.19
HNRNPC-206ENST00000553444 ICAM1P05362 532 aa13.87□□□□□ -0.19
HNRNPC-206ENST00000553444 ZFYP08048 801 aaPredicted RBP13.87□□□□□ -0.19
HNRNPC-206ENST00000553444 MS4A1P11836 297 aa13.87□□□□□ -0.19
HNRNPC-206ENST00000553444 PWP2Q15269 919 aaKnown RBP13.87□□□□□ -0.19
HNRNPC-206ENST00000553444 FAM47CQ5HY64 1035 aa13.87□□□□□ -0.19
HNRNPC-206ENST00000553444 PPP1R13LQ8WUF5 828 aa13.87□□□□□ -0.19
HNRNPC-206ENST00000553444 GPHNQ9NQX3 736 aaPredicted RBP13.87□□□□□ -0.19
HNRNPC-206ENST00000553444 ADD3Q9UEY8 706 aaKnown RBP13.87□□□□□ -0.19
HNRNPC-206ENST00000553444 TRANK1O15050 2925 aa13.86□□□□□ -0.19
HNRNPC-206ENST00000553444 LCHNA4D1U4 455 aa13.86□□□□□ -0.19
HNRNPC-206ENST00000553444 PTPN11Q06124 597 aaPredicted RBP13.86□□□□□ -0.19
HNRNPC-206ENST00000553444 PPARAQ07869 468 aa13.86□□□□□ -0.19
HNRNPC-206ENST00000553444 BFSP2Q13515 415 aa13.86□□□□□ -0.19
HNRNPC-206ENST00000553444 BRDTQ58F21 947 aaPredicted RBP13.86□□□□□ -0.19
HNRNPC-206ENST00000553444 PPP4R3BQ5MIZ7 849 aa13.86□□□□□ -0.19
HNRNPC-206ENST00000553444 GDPD5Q8WTR4 605 aa13.86□□□□□ -0.19
HNRNPC-206ENST00000553444 NACAP1Q9BZK3 213 aa13.86□□□□□ -0.19
HNRNPC-206ENST00000553444 RANBP17Q9H2T7 1088 aaKnown RBP13.86□□□□□ -0.19
HNRNPC-206ENST00000553444 RNF216Q9NWF9 866 aaPredicted RBP13.86□□□□□ -0.19
HNRNPC-206ENST00000553444 LMCD1Q9NZU5 365 aa13.86□□□□□ -0.19
HNRNPC-206ENST00000553444 STX8Q9UNK0 236 aa13.86□□□□□ -0.19
HNRNPC-206ENST00000553444 MYH8P13535 1937 aa13.86□□□□□ -0.19
HNRNPC-206ENST00000553444 MCM3APO60318 1980 aa13.85□□□□□ -0.19
HNRNPC-206ENST00000553444 A6NJR5 290 aa13.85□□□□□ -0.19
HNRNPC-206ENST00000553444 NFIBO00712 420 aa13.85□□□□□ -0.19
HNRNPC-206ENST00000553444 NKRFO15226 690 aaKnown RBP eCLIP13.85□□□□□ -0.19
HNRNPC-206ENST00000553444 KPNA6O60684 536 aa13.85□□□□□ -0.19
HNRNPC-206ENST00000553444 SLC3A2P08195 630 aaKnown RBP13.85□□□□□ -0.19
HNRNPC-206ENST00000553444 KCNJ6P48051 423 aa13.85□□□□□ -0.19
HNRNPC-206ENST00000553444 HNRNPUQ00839 825 aaKnown RBP eCLIP13.85□□□□□ -0.19
HNRNPC-206ENST00000553444 GPNMBQ14956 572 aa13.85□□□□□ -0.19
HNRNPC-206ENST00000553444 PPP2R5BQ15173 497 aa13.85□□□□□ -0.19
HNRNPC-206ENST00000553444 TSHZ3Q63HK5 1081 aa13.85□□□□□ -0.19
HNRNPC-206ENST00000553444 IL17RBQ9NRM6 502 aa13.85□□□□□ -0.19
HNRNPC-206ENST00000553444 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.85□□□□□ -0.19
HNRNPC-206ENST00000553444 TCF20Q9UGU0 1960 aaKnown RBP13.85□□□□□ -0.19
HNRNPC-206ENST00000553444 RAD50Q92878 1312 aa13.85□□□□□ -0.19
HNRNPC-206ENST00000553444 LRRC37A2A6NM11 1700 aa13.84□□□□□ -0.19
HNRNPC-206ENST00000553444 NMT2O60551 498 aa13.84□□□□□ -0.19
HNRNPC-206ENST00000553444 EDNRBP24530 442 aa13.84□□□□□ -0.19
HNRNPC-206ENST00000553444 NOVP48745 357 aa13.84□□□□□ -0.19
HNRNPC-206ENST00000553444 WDR5P61964 334 aaKnown RBP13.84□□□□□ -0.19
HNRNPC-206ENST00000553444 LRRFIP1Q32MZ4 808 aaKnown RBP13.84□□□□□ -0.19
HNRNPC-206ENST00000553444 SLC30A10Q6XR72 485 aa13.84□□□□□ -0.19
HNRNPC-206ENST00000553444 TMCO2Q7Z6W1 182 aaPredicted RBP13.84□□□□□ -0.19
HNRNPC-206ENST00000553444 COPS5Q92905 334 aa13.84□□□□□ -0.19
HNRNPC-206ENST00000553444 CTAGE1Q96RT6 745 aa13.84□□□□□ -0.19
HNRNPC-206ENST00000553444 NAPBQ9H115 298 aa13.84□□□□□ -0.19
HNRNPC-206ENST00000553444 UBE2ZQ9H832 354 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms