RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 GDPD5Q8WTR4 605 aa13.61□□□□□ -0.23
SUPT16H-202ENST00000552829 FRAT1Q92837 279 aaPredicted RBP13.61□□□□□ -0.23
SUPT16H-202ENST00000552829 SUGCTQ9HAC7 445 aa13.61□□□□□ -0.23
SUPT16H-202ENST00000552829 POLR3EQ9NVU0 708 aa13.61□□□□□ -0.23
SUPT16H-202ENST00000552829 SYNPO2Q9UMS6 1093 aa13.61□□□□□ -0.23
SUPT16H-202ENST00000552829 GRXCR2A6NFK2 248 aa13.6□□□□□ -0.23
SUPT16H-202ENST00000552829 TECTAO75443 2155 aa13.6□□□□□ -0.23
SUPT16H-202ENST00000552829 CHGBP05060 677 aa13.6□□□□□ -0.23
SUPT16H-202ENST00000552829 ERVK-21P61565 698 aa13.6□□□□□ -0.23
SUPT16H-202ENST00000552829 DUSP28Q4G0W2 176 aa13.6□□□□□ -0.23
SUPT16H-202ENST00000552829 SBK1Q52WX2 424 aa13.6□□□□□ -0.23
SUPT16H-202ENST00000552829 FBXO16Q8IX29 292 aaPredicted RBP13.6□□□□□ -0.23
SUPT16H-202ENST00000552829 RPAP2Q8IXW5 612 aaPredicted RBP13.6□□□□□ -0.23
SUPT16H-202ENST00000552829 UIMC1Q96RL1 719 aa13.6□□□□□ -0.23
SUPT16H-202ENST00000552829 VTA1Q9NP79 307 aa13.6□□□□□ -0.23
SUPT16H-202ENST00000552829 HOMER2Q9NSB8 354 aa13.6□□□□□ -0.23
SUPT16H-202ENST00000552829 RNF146Q9NTX7 359 aa13.6□□□□□ -0.23
SUPT16H-202ENST00000552829 CLIP2Q9UDT6 1046 aa13.6□□□□□ -0.23
SUPT16H-202ENST00000552829 EXOC6BQ9Y2D4 811 aa13.6□□□□□ -0.23
SUPT16H-202ENST00000552829 CTDP1Q9Y5B0 961 aaPredicted RBP13.6□□□□□ -0.23
SUPT16H-202ENST00000552829 ZDBF2Q9HCK1 2354 aa13.6□□□□□ -0.23
SUPT16H-202ENST00000552829 CFAP54Q96N23 3096 aa13.59□□□□□ -0.23
SUPT16H-202ENST00000552829 RBM47A0AV96 593 aaKnown RBP13.59□□□□□ -0.23
SUPT16H-202ENST00000552829 IL9P15248 144 aa13.59□□□□□ -0.23
SUPT16H-202ENST00000552829 WDR5P61964 334 aaKnown RBP13.59□□□□□ -0.23
SUPT16H-202ENST00000552829 UBE3CQ15386 1083 aa13.59□□□□□ -0.23
SUPT16H-202ENST00000552829 NBPF20Q3BBV1 942 aa13.59□□□□□ -0.23
SUPT16H-202ENST00000552829 TKFCQ3LXA3 575 aa13.59□□□□□ -0.23
SUPT16H-202ENST00000552829 CEP85Q6P2H3 762 aa13.59□□□□□ -0.23
SUPT16H-202ENST00000552829 GMCL1P1Q8NEA9 526 aa13.59□□□□□ -0.23
SUPT16H-202ENST00000552829 RHPN1Q8TCX5 695 aa13.59□□□□□ -0.23
SUPT16H-202ENST00000552829 DNAJC2Q99543 621 aaKnown RBP13.59□□□□□ -0.23
SUPT16H-202ENST00000552829 MTG1Q9BT17 334 aaPredicted RBP13.59□□□□□ -0.23
SUPT16H-202ENST00000552829 IL1RAPL2Q9NP60 686 aa13.59□□□□□ -0.23
SUPT16H-202ENST00000552829 COG6Q9Y2V7 657 aa13.59□□□□□ -0.23
SUPT16H-202ENST00000552829 SLC4A4Q9Y6R1 1079 aa13.59□□□□□ -0.23
SUPT16H-202ENST00000552829 DCXO43602 365 aa13.58□□□□□ -0.24
SUPT16H-202ENST00000552829 KCNA5P22460 613 aa13.58□□□□□ -0.24
SUPT16H-202ENST00000552829 SSTR3P32745 418 aaPredicted RBP13.58□□□□□ -0.24
SUPT16H-202ENST00000552829 ZKSCAN2Q63HK3 967 aa13.58□□□□□ -0.24
SUPT16H-202ENST00000552829 PTCRAQ6ISU1 281 aaPredicted RBP13.58□□□□□ -0.24
SUPT16H-202ENST00000552829 NFRKBQ6P4R8 1299 aa13.58□□□□□ -0.24
SUPT16H-202ENST00000552829 KIAA1211Q6ZU35 1233 aa13.58□□□□□ -0.24
SUPT16H-202ENST00000552829 EEPD1Q7L9B9 569 aa13.58□□□□□ -0.24
SUPT16H-202ENST00000552829 RETREG2Q8NC44 543 aa13.58□□□□□ -0.24
SUPT16H-202ENST00000552829 NEK9Q8TD19 979 aa13.58□□□□□ -0.24
SUPT16H-202ENST00000552829 FTOQ9C0B1 505 aaKnown RBP eCLIP13.58□□□□□ -0.24
SUPT16H-202ENST00000552829 PAG1Q9NWQ8 432 aa13.58□□□□□ -0.24
SUPT16H-202ENST00000552829 MTMR4Q9NYA4 1195 aa13.58□□□□□ -0.24
SUPT16H-202ENST00000552829 CYP39A1Q9NYL5 469 aa13.58□□□□□ -0.24
SUPT16H-202ENST00000552829 ARPP21Q9UBL0 812 aaPredicted RBP13.58□□□□□ -0.24
SUPT16H-202ENST00000552829 USP34Q70CQ2 3546 aa13.58□□□□□ -0.24
SUPT16H-202ENST00000552829 CACNA1HO95180 2353 aa13.58□□□□□ -0.24
SUPT16H-202ENST00000552829 SPTBN4Q9H254 2564 aa13.57□□□□□ -0.24
SUPT16H-202ENST00000552829 C19orf67A6NJJ6 358 aa13.57□□□□□ -0.24
SUPT16H-202ENST00000552829 BMP3P12645 472 aa13.57□□□□□ -0.24
SUPT16H-202ENST00000552829 PTPN11Q06124 597 aaPredicted RBP13.57□□□□□ -0.24
SUPT16H-202ENST00000552829 BFSP2Q13515 415 aa13.57□□□□□ -0.24
SUPT16H-202ENST00000552829 CSPP1Q1MSJ5 1256 aa13.57□□□□□ -0.24
SUPT16H-202ENST00000552829 PUS10Q3MIT2 529 aaKnown RBP13.57□□□□□ -0.24
SUPT16H-202ENST00000552829 TMCO2Q7Z6W1 182 aaPredicted RBP13.57□□□□□ -0.24
SUPT16H-202ENST00000552829 DDRGK1Q96HY6 314 aa13.57□□□□□ -0.24
SUPT16H-202ENST00000552829 TRERF1Q96PN7 1200 aa13.57□□□□□ -0.24
SUPT16H-202ENST00000552829 TGS1Q96RS0 853 aaKnown RBP13.57□□□□□ -0.24
SUPT16H-202ENST00000552829 CTAGE1Q96RT6 745 aa13.57□□□□□ -0.24
SUPT16H-202ENST00000552829 RAD9AQ99638 391 aa13.57□□□□□ -0.24
SUPT16H-202ENST00000552829 C5orf42Q9H799 3197 aa13.57□□□□□ -0.24
SUPT16H-202ENST00000552829 LINC01553A4QN01 128 aa13.56□□□□□ -0.24
SUPT16H-202ENST00000552829 GSG1L2A8MUP6 293 aa13.56□□□□□ -0.24
SUPT16H-202ENST00000552829 TMEM232C9JQI7 657 aa13.56□□□□□ -0.24
SUPT16H-202ENST00000552829 PLA2G6O60733 806 aa13.56□□□□□ -0.24
SUPT16H-202ENST00000552829 GJB5O95377 273 aa13.56□□□□□ -0.24
SUPT16H-202ENST00000552829 RLBP1P12271 317 aa13.56□□□□□ -0.24
SUPT16H-202ENST00000552829 KCNJ6P48051 423 aa13.56□□□□□ -0.24
SUPT16H-202ENST00000552829 CPT1AP50416 773 aa13.56□□□□□ -0.24
SUPT16H-202ENST00000552829 DEFB103AP81534 67 aa13.56□□□□□ -0.24
SUPT16H-202ENST00000552829 COL19A1Q14993 1142 aa13.56□□□□□ -0.24
SUPT16H-202ENST00000552829 LRRFIP1Q32MZ4 808 aaKnown RBP13.56□□□□□ -0.24
SUPT16H-202ENST00000552829 MUM1L1Q5H9M0 696 aa13.56□□□□□ -0.24
SUPT16H-202ENST00000552829 SLFN13Q68D06 897 aa13.56□□□□□ -0.24
SUPT16H-202ENST00000552829 GIMAP6Q6P9H5 292 aa13.56□□□□□ -0.24
SUPT16H-202ENST00000552829 ANKS1AQ92625 1134 aa13.56□□□□□ -0.24
SUPT16H-202ENST00000552829 CEP95Q96GE4 821 aa13.56□□□□□ -0.24
SUPT16H-202ENST00000552829 STRBPQ96SI9 672 aaKnown RBP13.56□□□□□ -0.24
SUPT16H-202ENST00000552829 HAUS7Q99871 368 aa13.56□□□□□ -0.24
SUPT16H-202ENST00000552829 WDR11Q9BZH6 1224 aa13.56□□□□□ -0.24
SUPT16H-202ENST00000552829 PUS7LQ9H0K6 701 aaKnown RBP13.56□□□□□ -0.24
SUPT16H-202ENST00000552829 MKNK2Q9HBH9 465 aa13.56□□□□□ -0.24
SUPT16H-202ENST00000552829 LOC102724159A0A0B4J2E5 919 aa13.55□□□□□ -0.24
SUPT16H-202ENST00000552829 A6NJR5 290 aa13.55□□□□□ -0.24
SUPT16H-202ENST00000552829 TTLL1O95922 423 aa13.55□□□□□ -0.24
SUPT16H-202ENST00000552829 CXCL10P02778 98 aa13.55□□□□□ -0.24
SUPT16H-202ENST00000552829 MYL3P08590 195 aa13.55□□□□□ -0.24
SUPT16H-202ENST00000552829 ALAS1P13196 640 aa13.55□□□□□ -0.24
SUPT16H-202ENST00000552829 ATP5JP18859 108 aa13.55□□□□□ -0.24
SUPT16H-202ENST00000552829 ZP2Q05996 745 aa13.55□□□□□ -0.24
SUPT16H-202ENST00000552829 PWP2Q15269 919 aaKnown RBP13.55□□□□□ -0.24
SUPT16H-202ENST00000552829 TCTN1Q2MV58 587 aa13.55□□□□□ -0.24
SUPT16H-202ENST00000552829 HSP90AB4PQ58FF6 505 aa13.55□□□□□ -0.24
SUPT16H-202ENST00000552829 HFE2Q6ZVN8 426 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms