RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 COL4A3BPQ9Y5P4 624 aa6.96□□□□□ -1.3
LIMA1-205ENST00000550592 NPHP3-ACAD11A0A0J9YXS1 232 aa6.95□□□□□ -1.3
LIMA1-205ENST00000550592 TBC1D8O95759 1140 aa6.95□□□□□ -1.3
LIMA1-205ENST00000550592 PRNPP04156 253 aa6.95□□□□□ -1.3
LIMA1-205ENST00000550592 HMGB1P09429 215 aaKnown RBP6.95□□□□□ -1.3
LIMA1-205ENST00000550592 IBSPP21815 317 aaPredicted RBP6.95□□□□□ -1.3
LIMA1-205ENST00000550592 GPR85P60893 370 aa6.95□□□□□ -1.3
LIMA1-205ENST00000550592 BNIP3Q12983 259 aa6.95□□□□□ -1.3
LIMA1-205ENST00000550592 CYP2R1Q6VVX0 501 aa6.95□□□□□ -1.3
LIMA1-205ENST00000550592 WAPLQ7Z5K2 1190 aa6.95□□□□□ -1.3
LIMA1-205ENST00000550592 FGD2Q7Z6J4 655 aa6.95□□□□□ -1.3
LIMA1-205ENST00000550592 LRRTM3Q86VH5 581 aa6.95□□□□□ -1.3
LIMA1-205ENST00000550592 IFNL3Q8IZI9 196 aa6.95□□□□□ -1.3
LIMA1-205ENST00000550592 DDX1Q92499 740 aaKnown RBP6.95□□□□□ -1.3
LIMA1-205ENST00000550592 DIO2Q92813 273 aa6.95□□□□□ -1.3
LIMA1-205ENST00000550592 PHF20Q9BVI0 1012 aa6.95□□□□□ -1.3
LIMA1-205ENST00000550592 ERVK13-1Q9NX77 482 aa6.95□□□□□ -1.3
LIMA1-205ENST00000550592 MAPRE3Q9UPY8 281 aa6.95□□□□□ -1.3
LIMA1-205ENST00000550592 NOP58Q9Y2X3 529 aaKnown RBP6.95□□□□□ -1.3
LIMA1-205ENST00000550592 TCRBV16S1A1N1A0A5B0 115 aa6.94□□□□□ -1.3
LIMA1-205ENST00000550592 GSG1L2A8MUP6 293 aa6.94□□□□□ -1.3
LIMA1-205ENST00000550592 PPM1GO15355 546 aaPredicted RBP6.94□□□□□ -1.3
LIMA1-205ENST00000550592 ASLP04424 464 aa6.94□□□□□ -1.3
LIMA1-205ENST00000550592 NAT1P18440 290 aa6.94□□□□□ -1.3
LIMA1-205ENST00000550592 POU3F2P20265 443 aaPredicted RBP6.94□□□□□ -1.3
LIMA1-205ENST00000550592 STAT3P40763 770 aa6.94□□□□□ -1.3
LIMA1-205ENST00000550592 CEBPAP49715 358 aaPredicted RBP6.94□□□□□ -1.3
LIMA1-205ENST00000550592 IKZF1Q13422 519 aa6.94□□□□□ -1.3
LIMA1-205ENST00000550592 RCBTB1Q8NDN9 531 aa6.94□□□□□ -1.3
LIMA1-205ENST00000550592 FCRL2Q96LA5 508 aaPredicted RBP6.94□□□□□ -1.3
LIMA1-205ENST00000550592 SLC5A6Q9Y289 635 aa6.94□□□□□ -1.3
LIMA1-205ENST00000550592 FAM83GA6ND36 823 aa6.93□□□□□ -1.3
LIMA1-205ENST00000550592 PDE8AO60658 829 aa6.93□□□□□ -1.3
LIMA1-205ENST00000550592 MSCO60682 206 aa6.93□□□□□ -1.3
LIMA1-205ENST00000550592 MED26O95402 600 aa6.93□□□□□ -1.3
LIMA1-205ENST00000550592 CRTAMO95727 393 aa6.93□□□□□ -1.3
LIMA1-205ENST00000550592 LCP1P13796 627 aa6.93□□□□□ -1.3
LIMA1-205ENST00000550592 CD96P40200 585 aa6.93□□□□□ -1.3
LIMA1-205ENST00000550592 AMPD3Q01432 767 aa6.93□□□□□ -1.3
LIMA1-205ENST00000550592 INF2Q27J81 1249 aa6.93□□□□□ -1.3
LIMA1-205ENST00000550592 HLA-DQA1Q5Y7H0 255 aa6.93□□□□□ -1.3
LIMA1-205ENST00000550592 LBX2Q6XYB7 198 aa6.93□□□□□ -1.3
LIMA1-205ENST00000550592 SPRED2Q7Z698 418 aa6.93□□□□□ -1.3
LIMA1-205ENST00000550592 WFDC3Q8IUB2 231 aa6.93□□□□□ -1.3
LIMA1-205ENST00000550592 NAT16Q8N8M0 369 aa6.93□□□□□ -1.3
LIMA1-205ENST00000550592 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.93□□□□□ -1.3
LIMA1-205ENST00000550592 LINC01599Q8WXQ3 324 aa6.93□□□□□ -1.3
LIMA1-205ENST00000550592 G6PC3Q9BUM1 346 aa6.93□□□□□ -1.3
LIMA1-205ENST00000550592 TARS2Q9BW92 718 aaKnown RBP6.93□□□□□ -1.3
LIMA1-205ENST00000550592 CAAP1Q9H8G2 361 aa6.93□□□□□ -1.3
LIMA1-205ENST00000550592 CARS2Q9HA77 564 aaKnown RBP6.93□□□□□ -1.3
LIMA1-205ENST00000550592 TNFRSF10DQ9UBN6 386 aa6.93□□□□□ -1.3
LIMA1-205ENST00000550592 PCDHA9Q9Y5H5 950 aa6.93□□□□□ -1.3
LIMA1-205ENST00000550592 TNPO3Q9Y5L0 923 aaKnown RBP6.93□□□□□ -1.3
LIMA1-205ENST00000550592 hCG_2014768A0A024R1R8 64 aa6.92□□□□□ -1.3
LIMA1-205ENST00000550592 CD8BP10966 210 aa6.92□□□□□ -1.3
LIMA1-205ENST00000550592 ITGB7P26010 798 aa6.92□□□□□ -1.3
LIMA1-205ENST00000550592 IGFALSP35858 605 aa6.92□□□□□ -1.3
LIMA1-205ENST00000550592 IGBP1P78318 339 aa6.92□□□□□ -1.3
LIMA1-205ENST00000550592 GUCY1A3Q02108 690 aa6.92□□□□□ -1.3
LIMA1-205ENST00000550592 MBLAC2Q68D91 279 aa6.92□□□□□ -1.3
LIMA1-205ENST00000550592 RNF180Q86T96 592 aa6.92□□□□□ -1.3
LIMA1-205ENST00000550592 DTX1Q86Y01 620 aa6.92□□□□□ -1.3
LIMA1-205ENST00000550592 CPNE8Q86YQ8 564 aa6.92□□□□□ -1.3
LIMA1-205ENST00000550592 CHAC2Q8WUX2 184 aa6.92□□□□□ -1.3
LIMA1-205ENST00000550592 SYTL4Q96C24 671 aaPredicted RBP6.92□□□□□ -1.3
LIMA1-205ENST00000550592 C7orf72A4D263 438 aa6.91□□□□□ -1.3
LIMA1-205ENST00000550592 FADS2P1A8MWK0 482 aa6.91□□□□□ -1.3
LIMA1-205ENST00000550592 B4E1Z4 1266 aa6.91□□□□□ -1.3
LIMA1-205ENST00000550592 ARVCFO00192 962 aa6.91□□□□□ -1.3
LIMA1-205ENST00000550592 RASGRP1O95267 797 aa6.91□□□□□ -1.3
LIMA1-205ENST00000550592 KCNA6P17658 529 aa6.91□□□□□ -1.3
LIMA1-205ENST00000550592 SPINK2P20155 84 aa6.91□□□□□ -1.3
LIMA1-205ENST00000550592 CD97P48960 835 aa6.91□□□□□ -1.3
LIMA1-205ENST00000550592 ZP2Q05996 745 aa6.91□□□□□ -1.3
LIMA1-205ENST00000550592 ANGEL2Q5VTE6 544 aaKnown RBP6.91□□□□□ -1.3
LIMA1-205ENST00000550592 CNNM4Q6P4Q7 775 aa6.91□□□□□ -1.3
LIMA1-205ENST00000550592 AHI1Q8N157 1196 aa6.91□□□□□ -1.3
LIMA1-205ENST00000550592 PPM1KQ8N3J5 372 aa6.91□□□□□ -1.3
LIMA1-205ENST00000550592 MAP6Q96JE9 813 aa6.91□□□□□ -1.3
LIMA1-205ENST00000550592 CCDC39Q9UFE4 941 aa6.91□□□□□ -1.3
LIMA1-205ENST00000550592 EBF1Q9UH73 591 aa6.91□□□□□ -1.3
LIMA1-205ENST00000550592 PCDHA8Q9Y5H6 950 aa6.91□□□□□ -1.3
LIMA1-205ENST00000550592 TIMM13Q9Y5L4 95 aaPredicted RBP6.91□□□□□ -1.3
LIMA1-205ENST00000550592 A0A1W2PQ45 241 aaPredicted RBP6.9□□□□□ -1.3
LIMA1-205ENST00000550592 A0A1W2PQY0 241 aa6.9□□□□□ -1.3
LIMA1-205ENST00000550592 KIAA1324LA8MWY0 1029 aaPredicted RBP6.9□□□□□ -1.3
LIMA1-205ENST00000550592 OPA1O60313 960 aa6.9□□□□□ -1.3
LIMA1-205ENST00000550592 NPTXRO95502 500 aa6.9□□□□□ -1.3
LIMA1-205ENST00000550592 APPP05067 770 aa6.9□□□□□ -1.3
LIMA1-205ENST00000550592 ZGLP1P0C6A0 271 aa6.9□□□□□ -1.3
LIMA1-205ENST00000550592 SOX5P35711 763 aa6.9□□□□□ -1.3
LIMA1-205ENST00000550592 KIR2DL1P43626 348 aaPredicted RBP6.9□□□□□ -1.3
LIMA1-205ENST00000550592 KIR2DL2P43627 348 aaPredicted RBP6.9□□□□□ -1.3
LIMA1-205ENST00000550592 DUSP4Q13115 394 aa6.9□□□□□ -1.3
LIMA1-205ENST00000550592 LAPTM5Q13571 262 aa6.9□□□□□ -1.3
LIMA1-205ENST00000550592 KIZQ2M2Z5 673 aa6.9□□□□□ -1.3
LIMA1-205ENST00000550592 MTDHQ86UE4 582 aaKnown RBP6.9□□□□□ -1.3
LIMA1-205ENST00000550592 VSIG10LQ86VR7 867 aa6.9□□□□□ -1.3
LIMA1-205ENST00000550592 NLGN2Q8NFZ4 835 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms