RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 COL22A1Q8NFW1 1626 aaPredicted RBP15.76■□□□□ 0.11
RAPGEF3-218ENST00000548919 MOCS3O95396 460 aa15.76■□□□□ 0.11
RAPGEF3-218ENST00000548919 ZNF662Q6ZS27 426 aa15.76■□□□□ 0.11
RAPGEF3-218ENST00000548919 CCDC170Q8IYT3 715 aa15.76■□□□□ 0.11
RAPGEF3-218ENST00000548919 PURBQ96QR8 312 aaKnown RBP15.76■□□□□ 0.11
RAPGEF3-218ENST00000548919 NUP58Q9BVL2 599 aa15.76■□□□□ 0.11
RAPGEF3-218ENST00000548919 TCP11L1Q9NUJ3 509 aa15.76■□□□□ 0.11
RAPGEF3-218ENST00000548919 BARHL2Q9NY43 387 aa15.76■□□□□ 0.11
RAPGEF3-218ENST00000548919 EHD2Q9NZN4 543 aa15.76■□□□□ 0.11
RAPGEF3-218ENST00000548919 MCM3P25205 808 aa15.76■□□□□ 0.11
RAPGEF3-218ENST00000548919 VAV2P52735 878 aa15.76■□□□□ 0.11
RAPGEF3-218ENST00000548919 DGKHQ86XP1 1220 aa15.76■□□□□ 0.11
RAPGEF3-218ENST00000548919 DZIP1Q86YF9 867 aaKnown RBP15.76■□□□□ 0.11
RAPGEF3-218ENST00000548919 C2CD5Q86YS7 1000 aa15.76■□□□□ 0.11
RAPGEF3-218ENST00000548919 CREG2Q8IUH2 290 aa15.76■□□□□ 0.11
RAPGEF3-218ENST00000548919 KIAA0895Q8NCT3 520 aa15.76■□□□□ 0.11
RAPGEF3-218ENST00000548919 NOC3LQ8WTT2 800 aaKnown RBP15.76■□□□□ 0.11
RAPGEF3-218ENST00000548919 SEMA6BQ9H3T3 888 aa15.76■□□□□ 0.11
RAPGEF3-218ENST00000548919 ZNF652Q9Y2D9 606 aa15.76■□□□□ 0.11
RAPGEF3-218ENST00000548919 MYL1P05976 194 aa15.75■□□□□ 0.11
RAPGEF3-218ENST00000548919 SLC7A5Q01650 507 aa15.75■□□□□ 0.11
RAPGEF3-218ENST00000548919 ATP2B2Q01814 1243 aa15.75■□□□□ 0.11
RAPGEF3-218ENST00000548919 C12orf60Q5U649 245 aa15.75■□□□□ 0.11
RAPGEF3-218ENST00000548919 SH3RF3Q8TEJ3 882 aaPredicted RBP15.75■□□□□ 0.11
RAPGEF3-218ENST00000548919 RRP36Q96EU6 259 aaKnown RBP15.75■□□□□ 0.11
RAPGEF3-218ENST00000548919 LRRC1Q9BTT6 524 aa15.75■□□□□ 0.11
RAPGEF3-218ENST00000548919 IFIH1Q9BYX4 1025 aaKnown RBP15.75■□□□□ 0.11
RAPGEF3-218ENST00000548919 ARHGAP20Q9P2F6 1191 aa15.75■□□□□ 0.11
RAPGEF3-218ENST00000548919 BICDL2A1A5D9 508 aa15.75■□□□□ 0.11
RAPGEF3-218ENST00000548919 TSPY3P0CV98 308 aa15.75■□□□□ 0.11
RAPGEF3-218ENST00000548919 TSPY8P0CW00 308 aa15.75■□□□□ 0.11
RAPGEF3-218ENST00000548919 SPA17Q15506 151 aa15.75■□□□□ 0.11
RAPGEF3-218ENST00000548919 ANKRD13CQ8N6S4 541 aa15.75■□□□□ 0.11
RAPGEF3-218ENST00000548919 RETREG2Q8NC44 543 aa15.75■□□□□ 0.11
RAPGEF3-218ENST00000548919 SMARCC1Q92922 1105 aaPredicted RBP15.75■□□□□ 0.11
RAPGEF3-218ENST00000548919 RPGRIP1Q96KN7 1286 aa15.75■□□□□ 0.11
RAPGEF3-218ENST00000548919 DMGDHQ9UI17 866 aaKnown RBP15.75■□□□□ 0.11
RAPGEF3-218ENST00000548919 CASZ1Q86V15 1759 aa15.75■□□□□ 0.11
RAPGEF3-218ENST00000548919 ANO9A1A5B4 782 aa15.75■□□□□ 0.11
RAPGEF3-218ENST00000548919 OR52Z1P0C646 297 aa15.75■□□□□ 0.11
RAPGEF3-218ENST00000548919 FKBP15Q5T1M5 1219 aa15.75■□□□□ 0.11
RAPGEF3-218ENST00000548919 NFRKBQ6P4R8 1299 aa15.75■□□□□ 0.11
RAPGEF3-218ENST00000548919 RABEP2Q9H5N1 569 aa15.75■□□□□ 0.11
RAPGEF3-218ENST00000548919 SAP30BPQ9UHR5 308 aaKnown RBP15.75■□□□□ 0.11
RAPGEF3-218ENST00000548919 SNX12Q9UMY4 172 aa15.75■□□□□ 0.11
RAPGEF3-218ENST00000548919 PCDHA13Q9Y5I0 950 aa15.75■□□□□ 0.11
RAPGEF3-218ENST00000548919 RREB1Q92766 1687 aa15.75■□□□□ 0.11
RAPGEF3-218ENST00000548919 KCNQ2O43526 872 aa15.74■□□□□ 0.11
RAPGEF3-218ENST00000548919 NAPAP54920 295 aa15.74■□□□□ 0.11
RAPGEF3-218ENST00000548919 RPS8P62241 208 aaKnown RBP15.74■□□□□ 0.11
RAPGEF3-218ENST00000548919 DIXDC1Q155Q3 683 aa15.74■□□□□ 0.11
RAPGEF3-218ENST00000548919 DDB1Q16531 1140 aa15.74■□□□□ 0.11
RAPGEF3-218ENST00000548919 TMEM47Q9BQJ4 181 aa15.74■□□□□ 0.11
RAPGEF3-218ENST00000548919 MMTAG2Q9BU76 263 aaKnown RBP15.74■□□□□ 0.11
RAPGEF3-218ENST00000548919 MKRN1Q9UHC7 482 aaKnown RBP15.74■□□□□ 0.11
RAPGEF3-218ENST00000548919 GOLGA6BA6NDN3 693 aa15.74■□□□□ 0.11
RAPGEF3-218ENST00000548919 NCK2O43639 380 aa15.74■□□□□ 0.11
RAPGEF3-218ENST00000548919 EIF4A3P38919 411 aaKnown RBP15.74■□□□□ 0.11
RAPGEF3-218ENST00000548919 ZSCAN29Q8IWY8 852 aaPredicted RBP15.74■□□□□ 0.11
RAPGEF3-218ENST00000548919 MARCH10Q8NA82 808 aaPredicted RBP15.74■□□□□ 0.11
RAPGEF3-218ENST00000548919 DAGLBQ8NCG7 672 aa15.74■□□□□ 0.11
RAPGEF3-218ENST00000548919 ERGIC2Q96RQ1 377 aa15.74■□□□□ 0.11
RAPGEF3-218ENST00000548919 VAT1LQ9HCJ6 419 aa15.74■□□□□ 0.11
RAPGEF3-218ENST00000548919 KLRF2D3W0D1 207 aa15.73■□□□□ 0.11
RAPGEF3-218ENST00000548919 PRPHP41219 470 aa15.73■□□□□ 0.11
RAPGEF3-218ENST00000548919 GRIK5Q16478 980 aa15.73■□□□□ 0.11
RAPGEF3-218ENST00000548919 TBC1D9BQ66K14 1250 aa15.73■□□□□ 0.11
RAPGEF3-218ENST00000548919 SND1Q7KZF4 910 aaKnown RBP eCLIP15.73■□□□□ 0.11
RAPGEF3-218ENST00000548919 DYMQ7RTS9 669 aa15.73■□□□□ 0.11
RAPGEF3-218ENST00000548919 FAM114A1Q8IWE2 563 aa15.73■□□□□ 0.11
RAPGEF3-218ENST00000548919 CCDC47Q96A33 483 aaKnown RBP15.73■□□□□ 0.11
RAPGEF3-218ENST00000548919 C7orf25Q9BPX7 421 aa15.73■□□□□ 0.11
RAPGEF3-218ENST00000548919 EHD4Q9H223 541 aa15.73■□□□□ 0.11
RAPGEF3-218ENST00000548919 SH2D4AQ9H788 454 aa15.73■□□□□ 0.11
RAPGEF3-218ENST00000548919 MMRN2Q9H8L6 949 aa15.73■□□□□ 0.11
RAPGEF3-218ENST00000548919 SALL4Q9UJQ4 1053 aa15.73■□□□□ 0.11
RAPGEF3-218ENST00000548919 KIF11P52732 1056 aa15.73■□□□□ 0.11
RAPGEF3-218ENST00000548919 AENQ8WTP8 325 aaKnown RBP15.73■□□□□ 0.11
RAPGEF3-218ENST00000548919 DEF6Q9H4E7 631 aa15.73■□□□□ 0.11
RAPGEF3-218ENST00000548919 JRKLQ9Y4A0 524 aa15.73■□□□□ 0.11
RAPGEF3-218ENST00000548919 SMCO2A6NFE2 343 aa15.72■□□□□ 0.11
RAPGEF3-218ENST00000548919 LAD1O00515 517 aa15.72■□□□□ 0.11
RAPGEF3-218ENST00000548919 TXKP42681 527 aa15.72■□□□□ 0.11
RAPGEF3-218ENST00000548919 GNAQP50148 359 aa15.72■□□□□ 0.11
RAPGEF3-218ENST00000548919 POTEDQ86YR6 584 aa15.72■□□□□ 0.11
RAPGEF3-218ENST00000548919 CCDC155Q8N6L0 562 aa15.72■□□□□ 0.11
RAPGEF3-218ENST00000548919 TGFBRAP1Q8WUH2 860 aa15.72■□□□□ 0.11
RAPGEF3-218ENST00000548919 PLAGL2Q9UPG8 496 aa15.72■□□□□ 0.11
RAPGEF3-218ENST00000548919 A0A1W2PQJ5 194 aa15.72■□□□□ 0.11
RAPGEF3-218ENST00000548919 PALM3A6NDB9 673 aaPredicted RBP15.72■□□□□ 0.11
RAPGEF3-218ENST00000548919 VWA3BQ502W6 1294 aa15.72■□□□□ 0.11
RAPGEF3-218ENST00000548919 USP17L2Q6R6M4 530 aa15.72■□□□□ 0.11
RAPGEF3-218ENST00000548919 RRAGAQ7L523 313 aa15.72■□□□□ 0.11
RAPGEF3-218ENST00000548919 ZNF444Q8N0Y2 327 aaPredicted RBP15.72■□□□□ 0.11
RAPGEF3-218ENST00000548919 SPATA4Q8NEY3 305 aa15.72■□□□□ 0.11
RAPGEF3-218ENST00000548919 TRIM58Q8NG06 486 aa15.72■□□□□ 0.11
RAPGEF3-218ENST00000548919 NDST4Q9H3R1 872 aa15.72■□□□□ 0.11
RAPGEF3-218ENST00000548919 TMEM260Q9NX78 707 aa15.72■□□□□ 0.11
RAPGEF3-218ENST00000548919 BIN2Q9UBW5 565 aaPredicted RBP15.72■□□□□ 0.11
RAPGEF3-218ENST00000548919 SIK3Q9Y2K2 1263 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms