RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 Q9Y3F1 56 aa10.11□□□□□ -0.79
TROAP-208ENST00000548817 MYH7P12883 1935 aa10.11□□□□□ -0.79
TROAP-208ENST00000548817 ASTN1O14525 1302 aa10.1□□□□□ -0.79
TROAP-208ENST00000548817 APPP05067 770 aa10.1□□□□□ -0.79
TROAP-208ENST00000548817 IRS1P35568 1242 aa10.1□□□□□ -0.79
TROAP-208ENST00000548817 TCF15Q12870 199 aa10.1□□□□□ -0.79
TROAP-208ENST00000548817 COL19A1Q14993 1142 aa10.1□□□□□ -0.79
TROAP-208ENST00000548817 SLFNL1Q499Z3 407 aa10.1□□□□□ -0.79
TROAP-208ENST00000548817 SNRNP48Q6IEG0 339 aaKnown RBP10.1□□□□□ -0.79
TROAP-208ENST00000548817 CTR9Q6PD62 1173 aa10.1□□□□□ -0.79
TROAP-208ENST00000548817 SIRT2Q8IXJ6 389 aa10.1□□□□□ -0.79
TROAP-208ENST00000548817 ZNF444Q8N0Y2 327 aaPredicted RBP10.1□□□□□ -0.79
TROAP-208ENST00000548817 PRPF38AQ8NAV1 312 aaKnown RBP10.1□□□□□ -0.79
TROAP-208ENST00000548817 EDAQ92838 391 aa10.1□□□□□ -0.79
TROAP-208ENST00000548817 PABPC5Q96DU9 382 aaKnown RBP10.1□□□□□ -0.79
TROAP-208ENST00000548817 FBXO28Q9NVF7 368 aa10.1□□□□□ -0.79
TROAP-208ENST00000548817 ISY1Q9ULR0 285 aaKnown RBP10.1□□□□□ -0.79
TROAP-208ENST00000548817 GVINP1Q7Z2Y8 2422 aa10.09□□□□□ -0.79
TROAP-208ENST00000548817 PTPRSQ13332 1948 aa10.09□□□□□ -0.79
TROAP-208ENST00000548817 KMT2EQ8IZD2 1858 aa10.09□□□□□ -0.79
TROAP-208ENST00000548817 PROB1E7EW31 1015 aa10.09□□□□□ -0.79
TROAP-208ENST00000548817 TDO2P48775 406 aa10.09□□□□□ -0.79
TROAP-208ENST00000548817 NUBP1P53384 320 aa10.09□□□□□ -0.79
TROAP-208ENST00000548817 PTPROQ16827 1216 aa10.09□□□□□ -0.79
TROAP-208ENST00000548817 SBK1Q52WX2 424 aa10.09□□□□□ -0.79
TROAP-208ENST00000548817 GIMAP6Q6P9H5 292 aa10.09□□□□□ -0.79
TROAP-208ENST00000548817 NOL8Q76FK4 1167 aaKnown RBP10.09□□□□□ -0.79
TROAP-208ENST00000548817 STK11IPQ8N1F8 1099 aa10.09□□□□□ -0.79
TROAP-208ENST00000548817 RETREG2Q8NC44 543 aa10.09□□□□□ -0.79
TROAP-208ENST00000548817 ANKS1AQ92625 1134 aa10.09□□□□□ -0.79
TROAP-208ENST00000548817 MRPL38Q96DV4 380 aaKnown RBP10.09□□□□□ -0.79
TROAP-208ENST00000548817 FGD4Q96M96 766 aa10.09□□□□□ -0.79
TROAP-208ENST00000548817 RAD9AQ99638 391 aa10.09□□□□□ -0.79
TROAP-208ENST00000548817 ZBED2Q9BTP6 218 aa10.09□□□□□ -0.79
TROAP-208ENST00000548817 FTOQ9C0B1 505 aaKnown RBP eCLIP10.09□□□□□ -0.79
TROAP-208ENST00000548817 PUS7LQ9H0K6 701 aaKnown RBP10.09□□□□□ -0.79
TROAP-208ENST00000548817 ECHDC1Q9NTX5 307 aa10.09□□□□□ -0.79
TROAP-208ENST00000548817 NYAP2Q9P242 653 aa10.09□□□□□ -0.79
TROAP-208ENST00000548817 CLIP2Q9UDT6 1046 aa10.09□□□□□ -0.79
TROAP-208ENST00000548817 LCHNA4D1U4 455 aa10.08□□□□□ -0.8
TROAP-208ENST00000548817 F5H6K3 240 aa10.08□□□□□ -0.8
TROAP-208ENST00000548817 H3BQ06 376 aaPredicted RBP10.08□□□□□ -0.8
TROAP-208ENST00000548817 NCK2O43639 380 aa10.08□□□□□ -0.8
TROAP-208ENST00000548817 SMARCA5O60264 1052 aaPredicted RBP10.08□□□□□ -0.8
TROAP-208ENST00000548817 EFCAB14O75071 495 aa10.08□□□□□ -0.8
TROAP-208ENST00000548817 GJB5O95377 273 aa10.08□□□□□ -0.8
TROAP-208ENST00000548817 PARNO95453 639 aaKnown RBP10.08□□□□□ -0.8
TROAP-208ENST00000548817 ZFYP08048 801 aaPredicted RBP10.08□□□□□ -0.8
TROAP-208ENST00000548817 SLC3A2P08195 630 aaKnown RBP10.08□□□□□ -0.8
TROAP-208ENST00000548817 IQCF3P0C7M6 154 aa10.08□□□□□ -0.8
TROAP-208ENST00000548817 CYP2C9P11712 490 aa10.08□□□□□ -0.8
TROAP-208ENST00000548817 GNAT2P19087 354 aa10.08□□□□□ -0.8
TROAP-208ENST00000548817 WDR5P61964 334 aaKnown RBP10.08□□□□□ -0.8
TROAP-208ENST00000548817 KLRC3Q07444 240 aa10.08□□□□□ -0.8
TROAP-208ENST00000548817 BFSP2Q13515 415 aa10.08□□□□□ -0.8
TROAP-208ENST00000548817 IER5LQ5T953 404 aa10.08□□□□□ -0.8
TROAP-208ENST00000548817 SPRED2Q7Z698 418 aa10.08□□□□□ -0.8
TROAP-208ENST00000548817 CCDC144CPQ8IYA2 1237 aa10.08□□□□□ -0.8
TROAP-208ENST00000548817 CPXCR1Q8N123 301 aa10.08□□□□□ -0.8
TROAP-208ENST00000548817 ANKRD35Q8N283 1001 aa10.08□□□□□ -0.8
TROAP-208ENST00000548817 FBXL6Q8N531 539 aa10.08□□□□□ -0.8
TROAP-208ENST00000548817 CHST13Q8NET6 341 aa10.08□□□□□ -0.8
TROAP-208ENST00000548817 PBXIP1Q96AQ6 731 aa10.08□□□□□ -0.8
TROAP-208ENST00000548817 STRBPQ96SI9 672 aaKnown RBP10.08□□□□□ -0.8
TROAP-208ENST00000548817 NACAP1Q9BZK3 213 aa10.08□□□□□ -0.8
TROAP-208ENST00000548817 POLR3EQ9NVU0 708 aa10.08□□□□□ -0.8
TROAP-208ENST00000548817 RCAN3Q9UKA8 241 aa10.08□□□□□ -0.8
TROAP-208ENST00000548817 DCHS1Q96JQ0 3298 aa10.08□□□□□ -0.8
TROAP-208ENST00000548817 KMT2BQ9UMN6 2715 aaPredicted RBP10.08□□□□□ -0.8
TROAP-208ENST00000548817 LINC01553A4QN01 128 aa10.07□□□□□ -0.8
TROAP-208ENST00000548817 TMEM221A6NGB7 291 aa10.07□□□□□ -0.8
TROAP-208ENST00000548817 ASB14A6NK59 587 aa10.07□□□□□ -0.8
TROAP-208ENST00000548817 M0R296 226 aa10.07□□□□□ -0.8
TROAP-208ENST00000548817 RNF113AO15541 343 aaKnown RBP10.07□□□□□ -0.8
TROAP-208ENST00000548817 RASA1P20936 1047 aa10.07□□□□□ -0.8
TROAP-208ENST00000548817 PSMC6P62333 389 aa10.07□□□□□ -0.8
TROAP-208ENST00000548817 PTPN11Q06124 597 aaPredicted RBP10.07□□□□□ -0.8
TROAP-208ENST00000548817 SMAD2Q15796 467 aaKnown RBP10.07□□□□□ -0.8
TROAP-208ENST00000548817 IQSEC1Q6DN90 963 aa10.07□□□□□ -0.8
TROAP-208ENST00000548817 TRIM67Q6ZTA4 783 aa10.07□□□□□ -0.8
TROAP-208ENST00000548817 RNF135Q8IUD6 432 aa10.07□□□□□ -0.8
TROAP-208ENST00000548817 KBTBD3Q8NAB2 608 aa10.07□□□□□ -0.8
TROAP-208ENST00000548817 APPBP2Q92624 585 aa10.07□□□□□ -0.8
TROAP-208ENST00000548817 KIFC2Q96AC6 838 aa10.07□□□□□ -0.8
TROAP-208ENST00000548817 SAMD11Q96NU1 681 aa10.07□□□□□ -0.8
TROAP-208ENST00000548817 NUP88Q99567 741 aaPredicted RBP10.07□□□□□ -0.8
TROAP-208ENST00000548817 TRMT13Q9NUP7 481 aaKnown RBP10.07□□□□□ -0.8
TROAP-208ENST00000548817 MUTYHQ9UIF7 546 aa10.07□□□□□ -0.8
TROAP-208ENST00000548817 FEM1BQ9UK73 627 aa10.07□□□□□ -0.8
TROAP-208ENST00000548817 RIPK3Q9Y572 518 aa10.07□□□□□ -0.8
TROAP-208ENST00000548817 TET1Q8NFU7 2136 aa10.07□□□□□ -0.8
TROAP-208ENST00000548817 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.06□□□□□ -0.8
TROAP-208ENST00000548817 GSG1L2A8MUP6 293 aa10.06□□□□□ -0.8
TROAP-208ENST00000548817 DYNC1LI2O43237 492 aaPredicted RBP10.06□□□□□ -0.8
TROAP-208ENST00000548817 TTLL1O95922 423 aa10.06□□□□□ -0.8
TROAP-208ENST00000548817 NDUFB10O96000 172 aa10.06□□□□□ -0.8
TROAP-208ENST00000548817 CHGBP05060 677 aa10.06□□□□□ -0.8
TROAP-208ENST00000548817 FDX1P10109 184 aa10.06□□□□□ -0.8
TROAP-208ENST00000548817 OAZ1P54368 228 aa10.06□□□□□ -0.8
TROAP-208ENST00000548817 PDE4BQ07343 736 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms