RNA–Protein interactions for RNA: ENST00000545028.2

KLHL1-202, Transcript of kelch like family member 1, humanhuman

TSL 2 BASIC

Gene KLHL1, Length 3,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1-202ENST00000545028 PPP4R3BQ5MIZ7 849 aa10.34□□□□□ -0.75
KLHL1-202ENST00000545028 FAM83BQ5T0W9 1011 aa10.34□□□□□ -0.75
KLHL1-202ENST00000545028 CEP57L1Q8IYX8 460 aa10.34□□□□□ -0.75
KLHL1-202ENST00000545028 SPZ1Q9BXG8 430 aa10.34□□□□□ -0.75
KLHL1-202ENST00000545028 EHD4Q9H223 541 aa10.34□□□□□ -0.75
KLHL1-202ENST00000545028 NT5C2P49902 561 aa10.34□□□□□ -0.75
KLHL1-202ENST00000545028 JAG1P78504 1218 aa10.34□□□□□ -0.75
KLHL1-202ENST00000545028 RRP1BQ14684 758 aaKnown RBP10.34□□□□□ -0.75
KLHL1-202ENST00000545028 COA7Q96BR5 231 aa10.34□□□□□ -0.75
KLHL1-202ENST00000545028 DHX58Q96C10 678 aa10.34□□□□□ -0.75
KLHL1-202ENST00000545028 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.34□□□□□ -0.75
KLHL1-202ENST00000545028 TUBE1Q9UJT0 475 aa10.34□□□□□ -0.75
KLHL1-202ENST00000545028 V9GYY5 206 aaPredicted RBP10.34□□□□□ -0.75
KLHL1-202ENST00000545028 APLP1P51693 650 aa10.34□□□□□ -0.75
KLHL1-202ENST00000545028 NAPAP54920 295 aa10.34□□□□□ -0.75
KLHL1-202ENST00000545028 ATP2C1P98194 919 aaPredicted RBP10.34□□□□□ -0.75
KLHL1-202ENST00000545028 SNAPC2Q13487 334 aa10.34□□□□□ -0.75
KLHL1-202ENST00000545028 STAMQ92783 540 aa10.34□□□□□ -0.75
KLHL1-202ENST00000545028 POLR2AP24928 1970 aaKnown RBP10.34□□□□□ -0.75
KLHL1-202ENST00000545028 GREB1LQ9C091 1923 aaPredicted RBP10.34□□□□□ -0.75
KLHL1-202ENST00000545028 ACTN4O43707 911 aaKnown RBP10.33□□□□□ -0.76
KLHL1-202ENST00000545028 PTGS1P23219 599 aa10.33□□□□□ -0.76
KLHL1-202ENST00000545028 NLRP12P59046 1061 aa10.33□□□□□ -0.76
KLHL1-202ENST00000545028 PLA2G4DQ86XP0 818 aa10.33□□□□□ -0.76
KLHL1-202ENST00000545028 SEC63Q9UGP8 760 aaKnown RBP10.33□□□□□ -0.76
KLHL1-202ENST00000545028 NPM3O75607 178 aaKnown RBP10.33□□□□□ -0.76
KLHL1-202ENST00000545028 CALML3P27482 149 aa10.33□□□□□ -0.76
KLHL1-202ENST00000545028 ZNF75DP51815 510 aa10.33□□□□□ -0.76
KLHL1-202ENST00000545028 USP14P54578 494 aa10.33□□□□□ -0.76
KLHL1-202ENST00000545028 FSTL1Q12841 308 aa10.33□□□□□ -0.76
KLHL1-202ENST00000545028 ZNF579Q8NAF0 562 aaKnown RBP10.33□□□□□ -0.76
KLHL1-202ENST00000545028 CAPNS2Q96L46 248 aa10.33□□□□□ -0.76
KLHL1-202ENST00000545028 TMEM60Q9H2L4 133 aa10.33□□□□□ -0.76
KLHL1-202ENST00000545028 KCNF1Q9H3M0 494 aa10.33□□□□□ -0.76
KLHL1-202ENST00000545028 SH3GLB2Q9NR46 395 aa10.33□□□□□ -0.76
KLHL1-202ENST00000545028 SMCO2A6NFE2 343 aa10.33□□□□□ -0.76
KLHL1-202ENST00000545028 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.33□□□□□ -0.76
KLHL1-202ENST00000545028 CCDC102AQ96A19 550 aa10.33□□□□□ -0.76
KLHL1-202ENST00000545028 RRP36Q96EU6 259 aaKnown RBP10.33□□□□□ -0.76
KLHL1-202ENST00000545028 SBF1O95248 1867 aa10.33□□□□□ -0.76
KLHL1-202ENST00000545028 CCDC194A0A1B0GVG4 234 aa10.33□□□□□ -0.76
KLHL1-202ENST00000545028 AOC2O75106 756 aa10.33□□□□□ -0.76
KLHL1-202ENST00000545028 TRPA1O75762 1119 aa10.33□□□□□ -0.76
KLHL1-202ENST00000545028 SNHG28P0DPA3 235 aa10.33□□□□□ -0.76
KLHL1-202ENST00000545028 BMP3P12645 472 aa10.33□□□□□ -0.76
KLHL1-202ENST00000545028 AFMP43652 599 aa10.33□□□□□ -0.76
KLHL1-202ENST00000545028 POSTNQ15063 836 aa10.33□□□□□ -0.76
KLHL1-202ENST00000545028 USH1GQ495M9 461 aa10.33□□□□□ -0.76
KLHL1-202ENST00000545028 C4orf32Q8N8J7 132 aa10.33□□□□□ -0.76
KLHL1-202ENST00000545028 ZMYND12Q9H0C1 365 aa10.33□□□□□ -0.76
KLHL1-202ENST00000545028 RIOX1Q9H6W3 641 aa10.33□□□□□ -0.76
KLHL1-202ENST00000545028 TMEM260Q9NX78 707 aa10.33□□□□□ -0.76
KLHL1-202ENST00000545028 NCAPHQ15003 741 aa10.32□□□□□ -0.76
KLHL1-202ENST00000545028 TAF1CQ15572 869 aaPredicted RBP10.32□□□□□ -0.76
KLHL1-202ENST00000545028 SAPCD2Q86UD0 394 aa10.32□□□□□ -0.76
KLHL1-202ENST00000545028 SIAH1Q8IUQ4 282 aa10.32□□□□□ -0.76
KLHL1-202ENST00000545028 RPAP3Q9H6T3 665 aaPredicted RBP10.32□□□□□ -0.76
KLHL1-202ENST00000545028 BIN2Q9UBW5 565 aaPredicted RBP10.32□□□□□ -0.76
KLHL1-202ENST00000545028 TSKSQ9UJT2 592 aa10.32□□□□□ -0.76
KLHL1-202ENST00000545028 BRCA1P38398 1863 aaKnown RBP10.32□□□□□ -0.76
KLHL1-202ENST00000545028 PP2D1A8MPX8 630 aa10.32□□□□□ -0.76
KLHL1-202ENST00000545028 PPP1R11O60927 126 aaPredicted RBP10.32□□□□□ -0.76
KLHL1-202ENST00000545028 CAVIN2O95810 425 aa10.32□□□□□ -0.76
KLHL1-202ENST00000545028 ZNF543Q08ER8 600 aa10.32□□□□□ -0.76
KLHL1-202ENST00000545028 PTPN21Q16825 1174 aa10.32□□□□□ -0.76
KLHL1-202ENST00000545028 JAKMIP3Q5VZ66 844 aa10.32□□□□□ -0.76
KLHL1-202ENST00000545028 ADGRF4Q8IZF3 695 aa10.32□□□□□ -0.76
KLHL1-202ENST00000545028 LZTS2Q9BRK4 669 aa10.32□□□□□ -0.76
KLHL1-202ENST00000545028 FBXO28Q9NVF7 368 aa10.32□□□□□ -0.76
KLHL1-202ENST00000545028 PSME4Q14997 1843 aa10.32□□□□□ -0.76
KLHL1-202ENST00000545028 SMCHD1A6NHR9 2005 aa10.32□□□□□ -0.76
KLHL1-202ENST00000545028 NDUFB10O96000 172 aa10.32□□□□□ -0.76
KLHL1-202ENST00000545028 BACE1P56817 501 aa10.32□□□□□ -0.76
KLHL1-202ENST00000545028 CCDC144BQ3MJ40 725 aa10.32□□□□□ -0.76
KLHL1-202ENST00000545028 CCDC148Q8NFR7 591 aa10.32□□□□□ -0.76
KLHL1-202ENST00000545028 HSD3B7Q9H2F3 369 aa10.32□□□□□ -0.76
KLHL1-202ENST00000545028 JMJD4Q9H9V9 463 aa10.32□□□□□ -0.76
KLHL1-202ENST00000545028 TBC1D12O60347 775 aa10.31□□□□□ -0.76
KLHL1-202ENST00000545028 C1QTNF8P60827 252 aa10.31□□□□□ -0.76
KLHL1-202ENST00000545028 FKBP1BP68106 108 aa10.31□□□□□ -0.76
KLHL1-202ENST00000545028 CHURC1Q8WUH1 139 aa10.31□□□□□ -0.76
KLHL1-202ENST00000545028 PGAP2Q9UHJ9 254 aa10.31□□□□□ -0.76
KLHL1-202ENST00000545028 SNCAIPQ9Y6H5 919 aa10.31□□□□□ -0.76
KLHL1-202ENST00000545028 CETPP11597 493 aa10.31□□□□□ -0.76
KLHL1-202ENST00000545028 ATP1A3P13637 1013 aa10.31□□□□□ -0.76
KLHL1-202ENST00000545028 LRMPQ12912 555 aa10.31□□□□□ -0.76
KLHL1-202ENST00000545028 PABPC4Q13310 644 aaKnown RBP eCLIP10.31□□□□□ -0.76
KLHL1-202ENST00000545028 TRMT1LQ7Z2T5 733 aaKnown RBP10.31□□□□□ -0.76
KLHL1-202ENST00000545028 FERMT2Q96AC1 680 aa10.31□□□□□ -0.76
KLHL1-202ENST00000545028 MAN1B1Q9UKM7 699 aa10.31□□□□□ -0.76
KLHL1-202ENST00000545028 A0A1W2PRG0 241 aa10.31□□□□□ -0.76
KLHL1-202ENST00000545028 OSBPP22059 807 aa10.31□□□□□ -0.76
KLHL1-202ENST00000545028 TRAPPC10P48553 1259 aa10.31□□□□□ -0.76
KLHL1-202ENST00000545028 GTF2A2P52657 109 aa10.31□□□□□ -0.76
KLHL1-202ENST00000545028 ARID5BQ14865 1188 aa10.31□□□□□ -0.76
KLHL1-202ENST00000545028 NOLC1Q14978 699 aaKnown RBP eCLIP10.31□□□□□ -0.76
KLHL1-202ENST00000545028 LETM2Q2VYF4 491 aa10.31□□□□□ -0.76
KLHL1-202ENST00000545028 TATDN1Q6P1N9 297 aa10.31□□□□□ -0.76
KLHL1-202ENST00000545028 FASTKD5Q7L8L6 764 aaKnown RBP10.31□□□□□ -0.76
KLHL1-202ENST00000545028 DAGLBQ8NCG7 672 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms