RNA–Protein interactions for RNA: ENST00000543393.5

RAP1B-229, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAP1B, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-229ENST00000543393 GMCL1Q96IK5 515 aa21.73■■□□□ 1.07
RAP1B-229ENST00000543393 ZBTB40Q9NUA8 1239 aa21.73■■□□□ 1.07
RAP1B-229ENST00000543393 POLR3EQ9NVU0 708 aa21.73■■□□□ 1.07
RAP1B-229ENST00000543393 GPAA1O43292 621 aa21.72■■□□□ 1.07
RAP1B-229ENST00000543393 APPP05067 770 aa21.72■■□□□ 1.07
RAP1B-229ENST00000543393 MCCP23508 829 aa21.72■■□□□ 1.07
RAP1B-229ENST00000543393 NSMFQ6X4W1 530 aa21.72■■□□□ 1.07
RAP1B-229ENST00000543393 MORC4Q8TE76 937 aa21.72■■□□□ 1.07
RAP1B-229ENST00000543393 KHSRPQ92945 711 aaKnown RBP eCLIP21.72■■□□□ 1.074e-8■■■□□ 17
RAP1B-229ENST00000543393 PLA2G6O60733 806 aa21.71■■□□□ 1.07
RAP1B-229ENST00000543393 MYL3P08590 195 aa21.71■■□□□ 1.07
RAP1B-229ENST00000543393 GNAT2P19087 354 aa21.71■■□□□ 1.07
RAP1B-229ENST00000543393 RFC2P35250 354 aa21.71■■□□□ 1.07
RAP1B-229ENST00000543393 HERC6Q8IVU3 1022 aa21.71■■□□□ 1.07
RAP1B-229ENST00000543393 KBTBD3Q8NAB2 608 aa21.71■■□□□ 1.07
RAP1B-229ENST00000543393 C11orf16Q9NQ32 467 aa21.71■■□□□ 1.07
RAP1B-229ENST00000543393 TANC1Q9C0D5 1861 aa21.71■■□□□ 1.07
RAP1B-229ENST00000543393 SCN10AQ9Y5Y9 1956 aa21.7■■□□□ 1.07
RAP1B-229ENST00000543393 TET1Q8NFU7 2136 aa21.7■■□□□ 1.06
RAP1B-229ENST00000543393 KIF28PB7ZC32 967 aa21.7■■□□□ 1.06
RAP1B-229ENST00000543393 GPR37L1O60883 481 aa21.7■■□□□ 1.06
RAP1B-229ENST00000543393 CPT1AP50416 773 aa21.7■■□□□ 1.06
RAP1B-229ENST00000543393 TFAP4Q01664 338 aa21.7■■□□□ 1.06
RAP1B-229ENST00000543393 GRB10Q13322 594 aa21.7■■□□□ 1.06
RAP1B-229ENST00000543393 FAM47CQ5HY64 1035 aa21.7■■□□□ 1.06
RAP1B-229ENST00000543393 KCTD1Q719H9 257 aa21.7■■□□□ 1.06
RAP1B-229ENST00000543393 WDR11Q9BZH6 1224 aa21.7■■□□□ 1.06
RAP1B-229ENST00000543393 LRRCC1Q9C099 1032 aa21.7■■□□□ 1.06
RAP1B-229ENST00000543393 PRR12Q9ULL5 1215 aa21.7■■□□□ 1.06
RAP1B-229ENST00000543393 DDX19BQ9UMR2 479 aa21.7■■□□□ 1.06
RAP1B-229ENST00000543393 M0R2C6 588 aa21.69■■□□□ 1.06
RAP1B-229ENST00000543393 SMARCA5O60264 1052 aaPredicted RBP21.69■■□□□ 1.06
RAP1B-229ENST00000543393 IQCF3P0C7M6 154 aa21.69■■□□□ 1.06
RAP1B-229ENST00000543393 PDE4BQ07343 736 aa21.69■■□□□ 1.06
RAP1B-229ENST00000543393 SPRED2Q7Z698 418 aa21.69■■□□□ 1.06
RAP1B-229ENST00000543393 IFNL3Q8IZI9 196 aa21.69■■□□□ 1.06
RAP1B-229ENST00000543393 PPP1R13LQ8WUF5 828 aa21.69■■□□□ 1.06
RAP1B-229ENST00000543393 MTG1Q9BT17 334 aaPredicted RBP21.69■■□□□ 1.06
RAP1B-229ENST00000543393 FTOQ9C0B1 505 aaKnown RBP eCLIP21.69■■□□□ 1.06
RAP1B-229ENST00000543393 GPHNQ9NQX3 736 aaPredicted RBP21.69■■□□□ 1.06
RAP1B-229ENST00000543393 ECHDC1Q9NTX5 307 aa21.69■■□□□ 1.06
RAP1B-229ENST00000543393 CCPG1Q9ULG6 757 aa21.69■■□□□ 1.06
RAP1B-229ENST00000543393 COL4A4P53420 1690 aaPredicted RBP21.69■■□□□ 1.06
RAP1B-229ENST00000543393 FAM86C2PA6NEL3 165 aa21.68■■□□□ 1.06
RAP1B-229ENST00000543393 PATL2C9JE40 543 aaKnown RBP21.68■■□□□ 1.06
RAP1B-229ENST00000543393 PITPNM1O00562 1244 aa21.68■■□□□ 1.06
RAP1B-229ENST00000543393 RNF113AO15541 343 aaKnown RBP21.68■■□□□ 1.06
RAP1B-229ENST00000543393 LPXNO60711 386 aa21.68■■□□□ 1.06
RAP1B-229ENST00000543393 MS4A1P11836 297 aa21.68■■□□□ 1.06
RAP1B-229ENST00000543393 NBPF20Q3BBV1 942 aa21.68■■□□□ 1.06
RAP1B-229ENST00000543393 RCSD1Q6JBY9 416 aa21.68■■□□□ 1.06
RAP1B-229ENST00000543393 RASGRP2Q7LDG7 609 aa21.68■■□□□ 1.06
RAP1B-229ENST00000543393 RETREG2Q8NC44 543 aa21.68■■□□□ 1.06
RAP1B-229ENST00000543393 PTPRSQ13332 1948 aa21.68■■□□□ 1.06
RAP1B-229ENST00000543393 ALDH5A1P51649 535 aaPredicted RBP21.67■■□□□ 1.06
RAP1B-229ENST00000543393 HNRNPUQ00839 825 aaKnown RBP eCLIP21.67■■□□□ 1.06
RAP1B-229ENST00000543393 OR6J1Q8NGC5 347 aa21.67■■□□□ 1.06
RAP1B-229ENST00000543393 ADD3Q9UEY8 706 aaKnown RBP21.67■■□□□ 1.06
RAP1B-229ENST00000543393 STX8Q9UNK0 236 aa21.67■■□□□ 1.06
RAP1B-229ENST00000543393 TRIP12Q14669 1992 aaPredicted RBP21.67■■□□□ 1.06
RAP1B-229ENST00000543393 BRWD1Q9NSI6 2320 aa21.66■■□□□ 1.06
RAP1B-229ENST00000543393 BAATQ14032 418 aaPredicted RBP21.66■■□□□ 1.06
RAP1B-229ENST00000543393 NFRKBQ6P4R8 1299 aa21.66■■□□□ 1.06
RAP1B-229ENST00000543393 CD320Q9NPF0 282 aa21.66■■□□□ 1.06
RAP1B-229ENST00000543393 RBM47A0AV96 593 aaKnown RBP21.65■■□□□ 1.06
RAP1B-229ENST00000543393 PI4K2BG5E9Z4 385 aa21.65■■□□□ 1.06
RAP1B-229ENST00000543393 BAIAP3O94812 1187 aa21.65■■□□□ 1.06
RAP1B-229ENST00000543393 ICAM1P05362 532 aa21.65■■□□□ 1.06
RAP1B-229ENST00000543393 ZFYP08048 801 aaPredicted RBP21.65■■□□□ 1.06
RAP1B-229ENST00000543393 PPARAQ07869 468 aa21.65■■□□□ 1.06
RAP1B-229ENST00000543393 BFSP2Q13515 415 aa21.65■■□□□ 1.06
RAP1B-229ENST00000543393 NACAP1Q9BZK3 213 aa21.65■■□□□ 1.06
RAP1B-229ENST00000543393 LCHNA4D1U4 455 aa21.64■■□□□ 1.05
RAP1B-229ENST00000543393 SLC3A2P08195 630 aaKnown RBP21.64■■□□□ 1.05
RAP1B-229ENST00000543393 BRDTQ58F21 947 aaPredicted RBP21.64■■□□□ 1.05
RAP1B-229ENST00000543393 PPP4R3BQ5MIZ7 849 aa21.64■■□□□ 1.05
RAP1B-229ENST00000543393 MTMR7Q9Y216 660 aa21.64■■□□□ 1.05
RAP1B-229ENST00000543393 MUC6Q6W4X9 2439 aa21.64■■□□□ 1.05
RAP1B-229ENST00000543393 RAD50Q92878 1312 aa21.63■■□□□ 1.05
RAP1B-229ENST00000543393 LOC102724159A0A0B4J2E5 919 aa21.63■■□□□ 1.05
RAP1B-229ENST00000543393 PTPDC1A2A3K4 754 aa21.63■■□□□ 1.05
RAP1B-229ENST00000543393 NFIBO00712 420 aa21.63■■□□□ 1.05
RAP1B-229ENST00000543393 NMT2O60551 498 aa21.63■■□□□ 1.05
RAP1B-229ENST00000543393 KCNJ6P48051 423 aa21.63■■□□□ 1.05
RAP1B-229ENST00000543393 PTPN11Q06124 597 aaPredicted RBP21.63■■□□□ 1.05
RAP1B-229ENST00000543393 PPP2R5BQ15173 497 aa21.63■■□□□ 1.05
RAP1B-229ENST00000543393 PWP2Q15269 919 aaKnown RBP21.63■■□□□ 1.05
RAP1B-229ENST00000543393 TSHZ3Q63HK5 1081 aa21.63■■□□□ 1.05
RAP1B-229ENST00000543393 TMCO2Q7Z6W1 182 aaPredicted RBP21.63■■□□□ 1.05
RAP1B-229ENST00000543393 GDPD5Q8WTR4 605 aa21.63■■□□□ 1.05
RAP1B-229ENST00000543393 SEC62Q99442 399 aaKnown RBP21.63■■□□□ 1.05
RAP1B-229ENST00000543393 NAPBQ9H115 298 aa21.63■■□□□ 1.05
RAP1B-229ENST00000543393 RANBP17Q9H2T7 1088 aaKnown RBP21.63■■□□□ 1.05
RAP1B-229ENST00000543393 IL17RBQ9NRM6 502 aa21.63■■□□□ 1.05
RAP1B-229ENST00000543393 NOD1Q9Y239 953 aa21.63■■□□□ 1.05
RAP1B-229ENST00000543393 TSPY2A6NKD2 308 aa21.62■■□□□ 1.05
RAP1B-229ENST00000543393 KPNA6O60684 536 aa21.62■■□□□ 1.05
RAP1B-229ENST00000543393 LMCD1Q9NZU5 365 aa21.62■■□□□ 1.05
RAP1B-229ENST00000543393 A6NJR5 290 aa21.61■■□□□ 1.05
RAP1B-229ENST00000543393 NKRFO15226 690 aaKnown RBP eCLIP21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms