RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 IKQ13123 557 aaPredicted RBP14.14□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 PKP1Q13835 747 aa14.14□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 KRT40Q6A162 431 aa14.14□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 TTBK2Q6IQ55 1244 aa14.14□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 CLEC17AQ6ZS10 378 aa14.14□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 FASTKD5Q7L8L6 764 aaKnown RBP14.14□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 BRAPQ7Z569 592 aa14.14□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 PRPF38AQ8NAV1 312 aaKnown RBP14.14□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 PIGSQ96S52 555 aa14.14□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 NUP88Q99567 741 aaPredicted RBP14.14□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 SLF1Q9BQI6 1058 aa14.14□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 UBA5Q9GZZ9 404 aa14.14□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 GLT8D2Q9H1C3 349 aa14.14□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 RANBP17Q9H2T7 1088 aaKnown RBP14.14□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 TTYH1Q9H313 450 aaPredicted RBP14.14□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 PRR12Q9ULL5 1215 aa14.14□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 GABRQQ9UN88 632 aa14.14□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 ZDHHC9Q9Y397 364 aa14.14□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 HCN4Q9Y3Q4 1203 aa14.14□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 DOCK3Q8IZD9 2030 aa14.14□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 RLFQ13129 1914 aa14.13□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 USP17L15C9J2P7 530 aa14.13□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 USP17L13C9JLJ4 530 aa14.13□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 USP17L11C9JVI0 530 aa14.13□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 USP17L18D6R9N7 530 aa14.13□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 USP17L22D6RA61 530 aa14.13□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 USP17L17D6RBQ6 530 aa14.13□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 USP17L19D6RCP7 530 aa14.13□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 USP17L20D6RJB6 530 aa14.13□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 IRF6O14896 467 aa14.13□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 HOXA7P31268 230 aaPredicted RBP14.13□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 MDM2Q00987 491 aaPredicted RBP14.13□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 USP17L24Q0WX57 530 aa14.13□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 PABPC4Q13310 644 aaKnown RBP eCLIP14.13□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 SNAPC2Q13487 334 aa14.13□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 CDC37Q16543 378 aaPredicted RBP14.13□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 HOMER1Q86YM7 354 aa14.13□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 DAGLBQ8NCG7 672 aa14.13□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 PXYLP1Q8TE99 480 aa14.13□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 PHF20Q9BVI0 1012 aa14.13□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 C1QTNF1Q9BXJ1 281 aa14.13□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 AMNQ9BXJ7 453 aa14.13□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 TANGO6Q9C0B7 1094 aa14.13□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 FOXP1Q9H334 677 aaPredicted RBP14.13□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 RPAP3Q9H6T3 665 aaPredicted RBP14.13□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 PPP1R9AQ9ULJ8 1098 aa14.13□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 A0A0G2JMZ2 1700 aa14.12□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 STXBP3O00186 592 aa14.12□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 PPFIA3O75145 1194 aa14.12□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 GNA11P29992 359 aa14.12□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 SLC16A2P36021 539 aa14.12□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 OAZ1P54368 228 aa14.12□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 QRICH1Q2TAL8 776 aa14.12□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 WWC2Q6AWC2 1192 aa14.12□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 ATL3Q6DD88 541 aa14.12□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 HEATR3Q7Z4Q2 680 aa14.12□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 ALYREFQ86V81 257 aaKnown RBP14.12□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 BICD2Q8TD16 824 aa14.12□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 ADAMTS19Q8TE59 1207 aa14.12□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 AIFM3Q96NN9 605 aa14.12□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 GBP4Q96PP9 640 aa14.12□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 ZMYND12Q9H0C1 365 aa14.12□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 CPVLQ9H3G5 476 aa14.12□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 VPS54Q9P1Q0 977 aa14.12□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 SLC45A1Q9Y2W3 748 aa14.12□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 LTBP2Q14767 1821 aa14.12□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 XIRP2A4UGR9 3374 aa14.12□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 FLOT1O75955 427 aa14.11□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 U2AF2P26368 475 aaKnown RBP eCLIP14.11□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 KRT2P35908 639 aa14.11□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 NAPAP54920 295 aa14.11□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 FCGRTP55899 365 aa14.11□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 RESTQ13127 1097 aa14.11□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 COG2Q14746 738 aa14.11□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 CATSPERGQ6ZRH7 1159 aa14.11□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 TNPO1Q92973 898 aaKnown RBP14.11□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 MAF1Q9H063 256 aa14.11□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 C11orf49Q9H6J7 331 aa14.11□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 VAT1LQ9HCJ6 419 aa14.11□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 C6orf50Q9HD87 102 aa14.11□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 ADAMTS5Q9UNA0 930 aa14.11□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 AGTPBP1Q9UPW5 1226 aa14.11□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 REV3LO60673 3130 aa14.11□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 hCG_1642624A0A1W2PR95 340 aa14.1□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 NLRP5P59047 1200 aa14.1□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 MCTP2Q6DN12 878 aa14.1□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 LBX2Q6XYB7 198 aa14.1□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 FBXO11Q86XK2 927 aa14.1□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 DIS3L2Q8IYB7 885 aaKnown RBP14.1□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 MB21D1Q8N884 522 aa14.1□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 GTF3C2Q8WUA4 911 aaPredicted RBP14.1□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 KIFC2Q96AC6 838 aa14.1□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.1□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 SLC38A10Q9HBR0 1119 aa14.1□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 HOXC10Q9NYD6 342 aa14.1□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 PCDHA4Q9UN74 947 aa14.1□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 ABCB11O95342 1321 aa14.1□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 ATP2A1O14983 1001 aa14.09□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 DTNBO60941 627 aa14.09□□□□□ -0.15
CACNA1C-IT3-201ENST00000542680 ZBED4O75132 1171 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms