RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 DNAJC25-GNG10A0A024R161 153 aa12.21□□□□□ -0.45
ATL3-204ENST00000540699 ZBTB5O15062 677 aa12.21□□□□□ -0.45
ATL3-204ENST00000540699 PPP1R11O60927 126 aaPredicted RBP12.21□□□□□ -0.45
ATL3-204ENST00000540699 IGHA2P01877 340 aa12.21□□□□□ -0.45
ATL3-204ENST00000540699 FCER1AP12319 257 aa12.21□□□□□ -0.45
ATL3-204ENST00000540699 MAP2K5Q13163 448 aa12.21□□□□□ -0.45
ATL3-204ENST00000540699 FOXD4L5Q5VV16 416 aaPredicted RBP12.21□□□□□ -0.45
ATL3-204ENST00000540699 FAM184AQ8NB25 1140 aa12.21□□□□□ -0.45
ATL3-204ENST00000540699 CLEC4DQ8WXI8 215 aa12.21□□□□□ -0.45
ATL3-204ENST00000540699 FOXD4L4Q8WXT5 416 aaPredicted RBP12.21□□□□□ -0.45
ATL3-204ENST00000540699 SHISA4Q96DD7 197 aa12.21□□□□□ -0.45
ATL3-204ENST00000540699 GBP4Q96PP9 640 aa12.21□□□□□ -0.45
ATL3-204ENST00000540699 RNF146Q9NTX7 359 aa12.21□□□□□ -0.45
ATL3-204ENST00000540699 KIF3AQ9Y496 699 aa12.21□□□□□ -0.45
ATL3-204ENST00000540699 IVNS1ABPQ9Y6Y0 642 aa12.21□□□□□ -0.45
ATL3-204ENST00000540699 ABCB11O95342 1321 aa12.2□□□□□ -0.46
ATL3-204ENST00000540699 PNMA6FA0A0J9YX94 578 aa12.2□□□□□ -0.46
ATL3-204ENST00000540699 VPS37CA5D8V6 355 aaPredicted RBP12.2□□□□□ -0.46
ATL3-204ENST00000540699 PPFIA3O75145 1194 aa12.2□□□□□ -0.46
ATL3-204ENST00000540699 ALAS1P13196 640 aa12.2□□□□□ -0.46
ATL3-204ENST00000540699 ADORA2AP29274 412 aa12.2□□□□□ -0.46
ATL3-204ENST00000540699 GRK4P32298 578 aa12.2□□□□□ -0.46
ATL3-204ENST00000540699 RGS2P41220 211 aa12.2□□□□□ -0.46
ATL3-204ENST00000540699 GHRHRQ02643 423 aa12.2□□□□□ -0.46
ATL3-204ENST00000540699 KCTD2Q14681 263 aa12.2□□□□□ -0.46
ATL3-204ENST00000540699 MTFR1Q15390 333 aa12.2□□□□□ -0.46
ATL3-204ENST00000540699 FBXO11Q86XK2 927 aa12.2□□□□□ -0.46
ATL3-204ENST00000540699 RAET1EQ8TD07 263 aa12.2□□□□□ -0.46
ATL3-204ENST00000540699 PXYLP1Q8TE99 480 aa12.2□□□□□ -0.46
ATL3-204ENST00000540699 PHKBQ93100 1093 aa12.2□□□□□ -0.46
ATL3-204ENST00000540699 TRERF1Q96PN7 1200 aa12.2□□□□□ -0.46
ATL3-204ENST00000540699 PIGSQ96S52 555 aa12.2□□□□□ -0.46
ATL3-204ENST00000540699 MMP19Q99542 508 aa12.2□□□□□ -0.46
ATL3-204ENST00000540699 AMNQ9BXJ7 453 aa12.2□□□□□ -0.46
ATL3-204ENST00000540699 ACAD9Q9H845 621 aa12.2□□□□□ -0.46
ATL3-204ENST00000540699 VAT1LQ9HCJ6 419 aa12.2□□□□□ -0.46
ATL3-204ENST00000540699 COBLO75128 1261 aa12.19□□□□□ -0.46
ATL3-204ENST00000540699 TAL1P17542 331 aaPredicted RBP12.19□□□□□ -0.46
ATL3-204ENST00000540699 SSRP1Q08945 709 aaKnown RBP12.19□□□□□ -0.46
ATL3-204ENST00000540699 TRAF1Q13077 416 aa12.19□□□□□ -0.46
ATL3-204ENST00000540699 RESTQ13127 1097 aa12.19□□□□□ -0.46
ATL3-204ENST00000540699 MUM1L1Q5H9M0 696 aa12.19□□□□□ -0.46
ATL3-204ENST00000540699 WDR78Q5VTH9 848 aa12.19□□□□□ -0.46
ATL3-204ENST00000540699 CMTR1Q8N1G2 835 aaKnown RBP12.19□□□□□ -0.46
ATL3-204ENST00000540699 SLAIN1Q8ND83 568 aa12.19□□□□□ -0.46
ATL3-204ENST00000540699 RRP36Q96EU6 259 aaKnown RBP12.19□□□□□ -0.46
ATL3-204ENST00000540699 APBA2Q99767 749 aa12.19□□□□□ -0.46
ATL3-204ENST00000540699 RNF26Q9BY78 433 aaPredicted RBP12.19□□□□□ -0.46
ATL3-204ENST00000540699 A1CFQ9NQ94 594 aaKnown RBP12.19□□□□□ -0.46
ATL3-204ENST00000540699 HOMER2Q9NSB8 354 aa12.19□□□□□ -0.46
ATL3-204ENST00000540699 DIS3Q9Y2L1 958 aaKnown RBP12.19□□□□□ -0.46
ATL3-204ENST00000540699 LRRC37A2A6NM11 1700 aa12.19□□□□□ -0.46
ATL3-204ENST00000540699 PFASO15067 1338 aa12.18□□□□□ -0.46
ATL3-204ENST00000540699 TCHHQ07283 1943 aa12.18□□□□□ -0.46
ATL3-204ENST00000540699 MYH15Q9Y2K3 1946 aa12.18□□□□□ -0.46
ATL3-204ENST00000540699 DDX11L8A8MPP1 907 aa12.18□□□□□ -0.46
ATL3-204ENST00000540699 NFIBO00712 420 aa12.18□□□□□ -0.46
ATL3-204ENST00000540699 OPLAHO14841 1288 aa12.18□□□□□ -0.46
ATL3-204ENST00000540699 ADCY3O60266 1144 aa12.18□□□□□ -0.46
ATL3-204ENST00000540699 ZNF792Q3KQV3 632 aa12.18□□□□□ -0.46
ATL3-204ENST00000540699 OLFML2BQ68BL8 750 aa12.18□□□□□ -0.46
ATL3-204ENST00000540699 HOMER1Q86YM7 354 aa12.18□□□□□ -0.46
ATL3-204ENST00000540699 TRMT44Q8IYL2 757 aaKnown RBP12.18□□□□□ -0.46
ATL3-204ENST00000540699 FAM133AQ8N9E0 248 aa12.18□□□□□ -0.46
ATL3-204ENST00000540699 FBXO18Q8NFZ0 1043 aa12.18□□□□□ -0.46
ATL3-204ENST00000540699 CHAMP1Q96JM3 812 aa12.18□□□□□ -0.46
ATL3-204ENST00000540699 AIFM3Q96NN9 605 aa12.18□□□□□ -0.46
ATL3-204ENST00000540699 SLC26A6Q9BXS9 759 aa12.18□□□□□ -0.46
ATL3-204ENST00000540699 CYP39A1Q9NYL5 469 aa12.18□□□□□ -0.46
ATL3-204ENST00000540699 MRPL11Q9Y3B7 192 aaKnown RBP12.18□□□□□ -0.46
ATL3-204ENST00000540699 FRMPD3Q5JV73 1810 aa12.17□□□□□ -0.46
ATL3-204ENST00000540699 H0YGN5 161 aa12.17□□□□□ -0.46
ATL3-204ENST00000540699 H3BQV1 296 aa12.17□□□□□ -0.46
ATL3-204ENST00000540699 PRPF3O43395 683 aaKnown RBP12.17□□□□□ -0.46
ATL3-204ENST00000540699 DEXIO95424 95 aa12.17□□□□□ -0.46
ATL3-204ENST00000540699 CCL5P13501 91 aa12.17□□□□□ -0.46
ATL3-204ENST00000540699 CYP2B6P20813 491 aa12.17□□□□□ -0.46
ATL3-204ENST00000540699 GJA8P48165 433 aa12.17□□□□□ -0.46
ATL3-204ENST00000540699 NBR1Q14596 966 aa12.17□□□□□ -0.46
ATL3-204ENST00000540699 PKN1Q16512 942 aa12.17□□□□□ -0.46
ATL3-204ENST00000540699 USH1GQ495M9 461 aa12.17□□□□□ -0.46
ATL3-204ENST00000540699 ZNF467Q7Z7K2 595 aaPredicted RBP12.17□□□□□ -0.46
ATL3-204ENST00000540699 DPP9Q86TI2 863 aa12.17□□□□□ -0.46
ATL3-204ENST00000540699 ANKRD35Q8N283 1001 aa12.17□□□□□ -0.46
ATL3-204ENST00000540699 SAMD3Q8N6K7 520 aa12.17□□□□□ -0.46
ATL3-204ENST00000540699 NPLOC4Q8TAT6 608 aa12.17□□□□□ -0.46
ATL3-204ENST00000540699 TRIB2Q92519 343 aa12.17□□□□□ -0.46
ATL3-204ENST00000540699 MAML3Q96JK9 1138 aa12.17□□□□□ -0.46
ATL3-204ENST00000540699 C8orf76Q96K31 380 aa12.17□□□□□ -0.46
ATL3-204ENST00000540699 FGD4Q96M96 766 aa12.17□□□□□ -0.46
ATL3-204ENST00000540699 ALG1Q9BT22 464 aa12.17□□□□□ -0.46
ATL3-204ENST00000540699 SLC5A4Q9NY91 659 aa12.17□□□□□ -0.46
ATL3-204ENST00000540699 RBM27Q9P2N5 1060 aaKnown RBP12.17□□□□□ -0.46
ATL3-204ENST00000540699 PCDHA1Q9Y5I3 950 aa12.17□□□□□ -0.46
ATL3-204ENST00000540699 ATP6V1DQ9Y5K8 247 aa12.17□□□□□ -0.46
ATL3-204ENST00000540699 ALPK3Q96L96 1907 aa12.17□□□□□ -0.46
ATL3-204ENST00000540699 KIAA1217Q5T5P2 1943 aa12.16□□□□□ -0.46
ATL3-204ENST00000540699 HMGCRP04035 888 aa12.16□□□□□ -0.46
ATL3-204ENST00000540699 PGK2P07205 417 aa12.16□□□□□ -0.46
ATL3-204ENST00000540699 GJB1P08034 283 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms