RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 SLC35G1Q2M3R5 365 aa15.49■□□□□ 0.07
SCNN1A-215ENST00000540037 TACC1O75410 805 aa15.49■□□□□ 0.07
SCNN1A-215ENST00000540037 GLI1P08151 1106 aa15.49■□□□□ 0.07
SCNN1A-215ENST00000540037 HNRNPH1P31943 449 aaKnown RBP15.49■□□□□ 0.07
SCNN1A-215ENST00000540037 IGHMBP2P38935 993 aaKnown RBP15.49■□□□□ 0.07
SCNN1A-215ENST00000540037 RNASE9P60153 205 aaKnown RBP15.49■□□□□ 0.07
SCNN1A-215ENST00000540037 ASIC1P78348 528 aa15.49■□□□□ 0.07
SCNN1A-215ENST00000540037 RCSD1Q6JBY9 416 aa15.49■□□□□ 0.07
SCNN1A-215ENST00000540037 GPATCH11Q8N954 259 aa15.49■□□□□ 0.07
SCNN1A-215ENST00000540037 TRIM58Q8NG06 486 aa15.49■□□□□ 0.07
SCNN1A-215ENST00000540037 PYM1Q9BRP8 204 aaKnown RBP15.49■□□□□ 0.07
SCNN1A-215ENST00000540037 SLC39A2Q9NP94 309 aa15.49■□□□□ 0.07
SCNN1A-215ENST00000540037 STIM2Q9P246 746 aa15.49■□□□□ 0.07
SCNN1A-215ENST00000540037 LRP5O75197 1615 aa15.49■□□□□ 0.07
SCNN1A-215ENST00000540037 CARSP49589 748 aaKnown RBP15.49■□□□□ 0.07
SCNN1A-215ENST00000540037 GFPT1Q06210 699 aaPredicted RBP15.49■□□□□ 0.07
SCNN1A-215ENST00000540037 TXNRD1Q16881 649 aa15.49■□□□□ 0.07
SCNN1A-215ENST00000540037 FNBP4Q8N3X1 1017 aaPredicted RBP15.49■□□□□ 0.07
SCNN1A-215ENST00000540037 MTMR8Q96EF0 704 aa15.49■□□□□ 0.07
SCNN1A-215ENST00000540037 SEMA6BQ9H3T3 888 aa15.49■□□□□ 0.07
SCNN1A-215ENST00000540037 MMRN2Q9H8L6 949 aa15.49■□□□□ 0.07
SCNN1A-215ENST00000540037 CCDC194A0A1B0GVG4 234 aa15.48■□□□□ 0.07
SCNN1A-215ENST00000540037 SHTN1A0MZ66 631 aa15.48■□□□□ 0.07
SCNN1A-215ENST00000540037 MYO1FO00160 1098 aa15.48■□□□□ 0.07
SCNN1A-215ENST00000540037 CCNE1P24864 410 aa15.48■□□□□ 0.07
SCNN1A-215ENST00000540037 GUCY1A3Q02108 690 aa15.48■□□□□ 0.07
SCNN1A-215ENST00000540037 CCDC181Q5TID7 509 aa15.48■□□□□ 0.07
SCNN1A-215ENST00000540037 CCDC70Q6NSX1 233 aa15.48■□□□□ 0.07
SCNN1A-215ENST00000540037 TRIM9Q9C026 710 aa15.48■□□□□ 0.07
SCNN1A-215ENST00000540037 NFU1Q9UMS0 254 aa15.48■□□□□ 0.07
SCNN1A-215ENST00000540037 PCDHA6Q9UN73 950 aa15.48■□□□□ 0.07
SCNN1A-215ENST00000540037 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.48■□□□□ 0.07
SCNN1A-215ENST00000540037 PCDHA8Q9Y5H6 950 aa15.48■□□□□ 0.07
SCNN1A-215ENST00000540037 A0A0G2JS52 829 aa15.48■□□□□ 0.07
SCNN1A-215ENST00000540037 TSPY2A6NKD2 308 aa15.48■□□□□ 0.07
SCNN1A-215ENST00000540037 NDUFAB1O14561 156 aa15.48■□□□□ 0.07
SCNN1A-215ENST00000540037 KLRK1P26718 216 aa15.48■□□□□ 0.07
SCNN1A-215ENST00000540037 GUCY2FP51841 1108 aa15.48■□□□□ 0.07
SCNN1A-215ENST00000540037 RASSF7Q02833 373 aa15.48■□□□□ 0.07
SCNN1A-215ENST00000540037 IQCEQ6IPM2 695 aa15.48■□□□□ 0.07
SCNN1A-215ENST00000540037 RRAGAQ7L523 313 aa15.48■□□□□ 0.07
SCNN1A-215ENST00000540037 KIAA0895Q8NCT3 520 aa15.48■□□□□ 0.07
SCNN1A-215ENST00000540037 IFT81Q8WYA0 676 aa15.48■□□□□ 0.07
SCNN1A-215ENST00000540037 NUP58Q9BVL2 599 aa15.48■□□□□ 0.07
SCNN1A-215ENST00000540037 PCDHA4Q9UN74 947 aa15.48■□□□□ 0.07
SCNN1A-215ENST00000540037 LRRC53A6NM62 1247 aa15.47■□□□□ 0.07
SCNN1A-215ENST00000540037 GOLGA8KD6RF30 607 aa15.47■□□□□ 0.07
SCNN1A-215ENST00000540037 AKR1B10O60218 316 aa15.47■□□□□ 0.07
SCNN1A-215ENST00000540037 INPP5BP32019 993 aa15.47■□□□□ 0.07
SCNN1A-215ENST00000540037 NNTQ13423 1086 aa15.47■□□□□ 0.07
SCNN1A-215ENST00000540037 TLR10Q9BXR5 811 aa15.47■□□□□ 0.07
SCNN1A-215ENST00000540037 PLAGL2Q9UPG8 496 aa15.47■□□□□ 0.07
SCNN1A-215ENST00000540037 FLT1P17948 1338 aa15.47■□□□□ 0.07
SCNN1A-215ENST00000540037 EPHB4P54760 987 aa15.47■□□□□ 0.07
SCNN1A-215ENST00000540037 C8orf74Q6P047 294 aa15.47■□□□□ 0.07
SCNN1A-215ENST00000540037 HEATR3Q7Z4Q2 680 aa15.47■□□□□ 0.07
SCNN1A-215ENST00000540037 DHTKD1Q96HY7 919 aaPredicted RBP15.47■□□□□ 0.07
SCNN1A-215ENST00000540037 RNPC3Q96LT9 517 aaKnown RBP15.47■□□□□ 0.07
SCNN1A-215ENST00000540037 CCDC43Q96MW1 224 aaKnown RBP15.47■□□□□ 0.07
SCNN1A-215ENST00000540037 RUFY1Q96T51 708 aa15.47■□□□□ 0.07
SCNN1A-215ENST00000540037 BRIP1Q9BX63 1249 aa15.47■□□□□ 0.07
SCNN1A-215ENST00000540037 PACSIN2Q9UNF0 486 aaPredicted RBP15.47■□□□□ 0.07
SCNN1A-215ENST00000540037 ZNF233A6NK53 670 aa15.46■□□□□ 0.07
SCNN1A-215ENST00000540037 USO1O60763 962 aaKnown RBP15.46■□□□□ 0.07
SCNN1A-215ENST00000540037 FGRP09769 529 aa15.46■□□□□ 0.07
SCNN1A-215ENST00000540037 NAP1L1P55209 391 aaKnown RBP15.46■□□□□ 0.07
SCNN1A-215ENST00000540037 SUGP1Q8IWZ8 645 aaKnown RBP15.46■□□□□ 0.07
SCNN1A-215ENST00000540037 RETREG2Q8NC44 543 aa15.46■□□□□ 0.07
SCNN1A-215ENST00000540037 ERGIC2Q96RQ1 377 aa15.46■□□□□ 0.07
SCNN1A-215ENST00000540037 DCP1AQ9NPI6 582 aaPredicted RBP15.46■□□□□ 0.07
SCNN1A-215ENST00000540037 CAPN7Q9Y6W3 813 aa15.46■□□□□ 0.07
SCNN1A-215ENST00000540037 ANKRD36CQ5JPF3 1778 aa15.46■□□□□ 0.07
SCNN1A-215ENST00000540037 M0R2N6 131 aa15.46■□□□□ 0.07
SCNN1A-215ENST00000540037 HSF2BPO75031 334 aa15.46■□□□□ 0.07
SCNN1A-215ENST00000540037 SLC1A4P43007 532 aa15.46■□□□□ 0.07
SCNN1A-215ENST00000540037 MNAT1P51948 309 aa15.46■□□□□ 0.07
SCNN1A-215ENST00000540037 SEC24CP53992 1094 aa15.46■□□□□ 0.07
SCNN1A-215ENST00000540037 MCTP2Q6DN12 878 aa15.46■□□□□ 0.07
SCNN1A-215ENST00000540037 C3orf67Q6ZVT6 689 aa15.46■□□□□ 0.07
SCNN1A-215ENST00000540037 CABP7Q86V35 215 aa15.46■□□□□ 0.07
SCNN1A-215ENST00000540037 GLIS3Q8NEA6 775 aa15.46■□□□□ 0.07
SCNN1A-215ENST00000540037 SIK3Q9Y2K2 1263 aa15.46■□□□□ 0.07
SCNN1A-215ENST00000540037 HYOU1Q9Y4L1 999 aa15.46■□□□□ 0.07
SCNN1A-215ENST00000540037 CACNA1SQ13698 1873 aa15.46■□□□□ 0.07
SCNN1A-215ENST00000540037 NHSL1Q5SYE7 1610 aa15.46■□□□□ 0.06
SCNN1A-215ENST00000540037 CYTH3O43739 400 aa15.46■□□□□ 0.06
SCNN1A-215ENST00000540037 GOLGA8HP0CJ92 632 aa15.46■□□□□ 0.06
SCNN1A-215ENST00000540037 ZSCAN29Q8IWY8 852 aaPredicted RBP15.46■□□□□ 0.06
SCNN1A-215ENST00000540037 TSGA10Q9BZW7 698 aa15.46■□□□□ 0.06
SCNN1A-215ENST00000540037 TAF1P21675 1872 aa15.45■□□□□ 0.06
SCNN1A-215ENST00000540037 OPA1O60313 960 aa15.45■□□□□ 0.06
SCNN1A-215ENST00000540037 TECP42680 631 aa15.45■□□□□ 0.06
SCNN1A-215ENST00000540037 MAGEA1P43355 309 aa15.45■□□□□ 0.06
SCNN1A-215ENST00000540037 GUCY2DQ02846 1103 aa15.45■□□□□ 0.06
SCNN1A-215ENST00000540037 CCDC152Q4G0S7 254 aa15.45■□□□□ 0.06
SCNN1A-215ENST00000540037 KLHDC7AQ5VTJ3 777 aa15.45■□□□□ 0.06
SCNN1A-215ENST00000540037 PROCA1Q8NCQ7 364 aaPredicted RBP15.45■□□□□ 0.06
SCNN1A-215ENST00000540037 EPB41L5Q9HCM4 733 aa15.45■□□□□ 0.06
SCNN1A-215ENST00000540037 IL17RBQ9NRM6 502 aa15.45■□□□□ 0.06
SCNN1A-215ENST00000540037 ERVV-1B6SEH8 477 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms