RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 CCDC17Q96LX7 622 aa9.24□□□□□ -0.93
ABCA4-207ENST00000536513 NAT10Q9H0A0 1025 aaKnown RBP9.24□□□□□ -0.93
ABCA4-207ENST00000536513 ZSWIM4Q9H7M6 989 aa9.24□□□□□ -0.93
ABCA4-207ENST00000536513 SWAP70Q9UH65 585 aa9.24□□□□□ -0.93
ABCA4-207ENST00000536513 PAPPAQ13219 1627 aa9.24□□□□□ -0.93
ABCA4-207ENST00000536513 SALL1Q9NSC2 1324 aa9.24□□□□□ -0.93
ABCA4-207ENST00000536513 CLGNO14967 610 aa9.23□□□□□ -0.93
ABCA4-207ENST00000536513 YEATS4O95619 227 aa9.23□□□□□ -0.93
ABCA4-207ENST00000536513 CALCRLQ16602 461 aa9.23□□□□□ -0.93
ABCA4-207ENST00000536513 STX1AQ16623 288 aa9.23□□□□□ -0.93
ABCA4-207ENST00000536513 ZNF710Q8N1W2 664 aa9.23□□□□□ -0.93
ABCA4-207ENST00000536513 CYP2W1Q8TAV3 490 aa9.23□□□□□ -0.93
ABCA4-207ENST00000536513 FAM200AQ8TCP9 573 aa9.23□□□□□ -0.93
ABCA4-207ENST00000536513 SHISA4Q96DD7 197 aa9.23□□□□□ -0.93
ABCA4-207ENST00000536513 POLR3EQ9NVU0 708 aa9.23□□□□□ -0.93
ABCA4-207ENST00000536513 LRWD1Q9UFC0 647 aa9.23□□□□□ -0.93
ABCA4-207ENST00000536513 MKRN1Q9UHC7 482 aaKnown RBP9.23□□□□□ -0.93
ABCA4-207ENST00000536513 CCT6AP40227 531 aaKnown RBP9.23□□□□□ -0.93
ABCA4-207ENST00000536513 SLC35G1Q2M3R5 365 aa9.23□□□□□ -0.93
ABCA4-207ENST00000536513 ILDR2Q71H61 639 aa9.23□□□□□ -0.93
ABCA4-207ENST00000536513 NEK11Q8NG66 645 aa9.23□□□□□ -0.93
ABCA4-207ENST00000536513 SNX29Q8TEQ0 813 aa9.23□□□□□ -0.93
ABCA4-207ENST00000536513 RASSF4Q9H2L5 321 aa9.23□□□□□ -0.93
ABCA4-207ENST00000536513 FOXP1Q9H334 677 aaPredicted RBP9.23□□□□□ -0.93
ABCA4-207ENST00000536513 ELP3Q9H9T3 547 aa9.23□□□□□ -0.93
ABCA4-207ENST00000536513 SLX4Q8IY92 1834 aa9.23□□□□□ -0.93
ABCA4-207ENST00000536513 H0YHG0 523 aa9.23□□□□□ -0.93
ABCA4-207ENST00000536513 IRX5P78411 483 aaPredicted RBP9.23□□□□□ -0.93
ABCA4-207ENST00000536513 SYDE2Q5VT97 1194 aa9.23□□□□□ -0.93
ABCA4-207ENST00000536513 KRBA2Q6ZNG9 492 aa9.23□□□□□ -0.93
ABCA4-207ENST00000536513 NEK8Q86SG6 692 aa9.23□□□□□ -0.93
ABCA4-207ENST00000536513 KCNV2Q8TDN2 545 aa9.23□□□□□ -0.93
ABCA4-207ENST00000536513 HOOK2Q96ED9 719 aa9.23□□□□□ -0.93
ABCA4-207ENST00000536513 IFNKQ9P0W0 207 aa9.23□□□□□ -0.93
ABCA4-207ENST00000536513 ZNF215Q9UL58 517 aaPredicted RBP9.23□□□□□ -0.93
ABCA4-207ENST00000536513 PCP11498 1178 aaKnown RBP9.22□□□□□ -0.93
ABCA4-207ENST00000536513 ATP1A3P13637 1013 aa9.22□□□□□ -0.93
ABCA4-207ENST00000536513 LRRC41Q15345 812 aa9.22□□□□□ -0.93
ABCA4-207ENST00000536513 ARHGAP29Q52LW3 1261 aa9.22□□□□□ -0.93
ABCA4-207ENST00000536513 TMC6Q7Z403 805 aa9.22□□□□□ -0.93
ABCA4-207ENST00000536513 PHF20Q9BVI0 1012 aa9.22□□□□□ -0.93
ABCA4-207ENST00000536513 GOPCQ9HD26 462 aa9.22□□□□□ -0.93
ABCA4-207ENST00000536513 PCDHA6Q9UN73 950 aa9.22□□□□□ -0.93
ABCA4-207ENST00000536513 PCDHA8Q9Y5H6 950 aa9.22□□□□□ -0.93
ABCA4-207ENST00000536513 SFI1A8K8P3 1242 aa9.22□□□□□ -0.93
ABCA4-207ENST00000536513 SLU7O95391 586 aaKnown RBP9.22□□□□□ -0.93
ABCA4-207ENST00000536513 MYCP01106 439 aaPredicted RBP9.22□□□□□ -0.93
ABCA4-207ENST00000536513 VIL1P09327 827 aaKnown RBP9.22□□□□□ -0.93
ABCA4-207ENST00000536513 TMEM266Q2M3C6 531 aa9.22□□□□□ -0.93
ABCA4-207ENST00000536513 NELFCDQ8IXH7 590 aa9.22□□□□□ -0.93
ABCA4-207ENST00000536513 FAM151AQ8WW52 585 aa9.22□□□□□ -0.93
ABCA4-207ENST00000536513 CCDC102AQ96A19 550 aa9.22□□□□□ -0.93
ABCA4-207ENST00000536513 AMNQ9BXJ7 453 aa9.22□□□□□ -0.93
ABCA4-207ENST00000536513 BARHL2Q9NY43 387 aa9.22□□□□□ -0.93
ABCA4-207ENST00000536513 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.22□□□□□ -0.93
ABCA4-207ENST00000536513 KIAA1468Q9P260 1216 aa9.22□□□□□ -0.93
ABCA4-207ENST00000536513 ELP1O95163 1332 aa9.22□□□□□ -0.93
ABCA4-207ENST00000536513 STXBP3O00186 592 aa9.22□□□□□ -0.93
ABCA4-207ENST00000536513 ZBTB5O15062 677 aa9.22□□□□□ -0.93
ABCA4-207ENST00000536513 CUTAO60888 179 aa9.22□□□□□ -0.93
ABCA4-207ENST00000536513 SNW1Q13573 536 aaKnown RBP9.22□□□□□ -0.93
ABCA4-207ENST00000536513 ARID5BQ14865 1188 aa9.22□□□□□ -0.93
ABCA4-207ENST00000536513 POSTNQ15063 836 aa9.22□□□□□ -0.93
ABCA4-207ENST00000536513 ASPRV1Q53RT3 343 aa9.22□□□□□ -0.93
ABCA4-207ENST00000536513 TPH2Q8IWU9 490 aa9.22□□□□□ -0.93
ABCA4-207ENST00000536513 CALML4Q96GE6 196 aa9.22□□□□□ -0.93
ABCA4-207ENST00000536513 TMEM51Q9NW97 253 aa9.22□□□□□ -0.93
ABCA4-207ENST00000536513 DDX25Q9UHL0 483 aaKnown RBP9.22□□□□□ -0.93
ABCA4-207ENST00000536513 ASNSP08243 561 aa9.21□□□□□ -0.93
ABCA4-207ENST00000536513 CMA1P23946 247 aa9.21□□□□□ -0.93
ABCA4-207ENST00000536513 FAM163AQ96GL9 167 aaPredicted RBP9.21□□□□□ -0.93
ABCA4-207ENST00000536513 PRR12Q9ULL5 1215 aa9.21□□□□□ -0.93
ABCA4-207ENST00000536513 PALM3A6NDB9 673 aaPredicted RBP9.21□□□□□ -0.93
ABCA4-207ENST00000536513 LMNB1P20700 586 aa9.21□□□□□ -0.93
ABCA4-207ENST00000536513 EVCP57679 992 aa9.21□□□□□ -0.93
ABCA4-207ENST00000536513 GPATCH4Q5T3I0 446 aaKnown RBP9.21□□□□□ -0.93
ABCA4-207ENST00000536513 CABP7Q86V35 215 aa9.21□□□□□ -0.93
ABCA4-207ENST00000536513 PCDHA12Q9UN75 941 aa9.21□□□□□ -0.93
ABCA4-207ENST00000536513 CSADQ9Y600 493 aa9.21□□□□□ -0.93
ABCA4-207ENST00000536513 THSD7AQ9UPZ6 1657 aa9.21□□□□□ -0.94
ABCA4-207ENST00000536513 IRS2Q9Y4H2 1338 aa9.21□□□□□ -0.94
ABCA4-207ENST00000536513 NHSQ6T4R5 1651 aa9.21□□□□□ -0.94
ABCA4-207ENST00000536513 PNMA6FA0A0J9YX94 578 aa9.21□□□□□ -0.94
ABCA4-207ENST00000536513 PPP1R12BO60237 982 aaPredicted RBP9.21□□□□□ -0.94
ABCA4-207ENST00000536513 POTEIP0CG38 1075 aa9.21□□□□□ -0.94
ABCA4-207ENST00000536513 POTEJP0CG39 1038 aa9.21□□□□□ -0.94
ABCA4-207ENST00000536513 SFPQP23246 707 aaKnown RBP eCLIP9.21□□□□□ -0.94
ABCA4-207ENST00000536513 KIAA1755Q5JYT7 1200 aa9.21□□□□□ -0.94
ABCA4-207ENST00000536513 KRT79Q5XKE5 535 aa9.21□□□□□ -0.94
ABCA4-207ENST00000536513 C15orf52Q6ZUT6 534 aaKnown RBP9.21□□□□□ -0.94
ABCA4-207ENST00000536513 NCAPG2Q86XI2 1143 aa9.21□□□□□ -0.94
ABCA4-207ENST00000536513 KIAA1524Q8TCG1 905 aa9.21□□□□□ -0.94
ABCA4-207ENST00000536513 SPOCK2Q92563 424 aa9.21□□□□□ -0.94
ABCA4-207ENST00000536513 SLC39A2Q9NP94 309 aa9.21□□□□□ -0.94
ABCA4-207ENST00000536513 CTNND2Q9UQB3 1225 aa9.21□□□□□ -0.94
ABCA4-207ENST00000536513 SLC37A4O43826 429 aa9.2□□□□□ -0.94
ABCA4-207ENST00000536513 PABPC4Q13310 644 aaKnown RBP eCLIP9.2□□□□□ -0.94
ABCA4-207ENST00000536513 AXDND1Q5T1B0 1012 aaPredicted RBP9.2□□□□□ -0.94
ABCA4-207ENST00000536513 FMR1NBQ8N0W7 255 aaPredicted RBP9.2□□□□□ -0.94
ABCA4-207ENST00000536513 IQUBQ8NA54 791 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms