RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 CCDC96Q2M329 555 aa9.53□□□□□ -0.88
CHFR-211ENST00000535897 MUM1L1Q5H9M0 696 aa9.53□□□□□ -0.88
CHFR-211ENST00000535897 PPP4R3BQ5MIZ7 849 aa9.53□□□□□ -0.88
CHFR-211ENST00000535897 TMEM63BQ5T3F8 832 aa9.53□□□□□ -0.88
CHFR-211ENST00000535897 C1QTNF1Q9BXJ1 281 aa9.53□□□□□ -0.88
CHFR-211ENST00000535897 ALDH8A1Q9H2A2 487 aaPredicted RBP9.53□□□□□ -0.88
CHFR-211ENST00000535897 VTA1Q9NP79 307 aa9.53□□□□□ -0.88
CHFR-211ENST00000535897 POLR3EQ9NVU0 708 aa9.53□□□□□ -0.88
CHFR-211ENST00000535897 CYP39A1Q9NYL5 469 aa9.53□□□□□ -0.88
CHFR-211ENST00000535897 ADD3Q9UEY8 706 aaKnown RBP9.53□□□□□ -0.88
CHFR-211ENST00000535897 PRR12Q9ULL5 1215 aa9.53□□□□□ -0.88
CHFR-211ENST00000535897 TNKSO95271 1327 aa9.53□□□□□ -0.88
CHFR-211ENST00000535897 RFXAPO00287 272 aa9.52□□□□□ -0.89
CHFR-211ENST00000535897 CHMP4BP1P59074 171 aa9.52□□□□□ -0.89
CHFR-211ENST00000535897 PPARAQ07869 468 aa9.52□□□□□ -0.89
CHFR-211ENST00000535897 BRDTQ58F21 947 aaPredicted RBP9.52□□□□□ -0.89
CHFR-211ENST00000535897 RCSD1Q6JBY9 416 aa9.52□□□□□ -0.89
CHFR-211ENST00000535897 TAPT1Q6NXT6 567 aa9.52□□□□□ -0.89
CHFR-211ENST00000535897 ARNTL2Q8WYA1 636 aa9.52□□□□□ -0.89
CHFR-211ENST00000535897 PURBQ96QR8 312 aaKnown RBP9.52□□□□□ -0.89
CHFR-211ENST00000535897 FSD1Q9BTV5 496 aa9.52□□□□□ -0.89
CHFR-211ENST00000535897 WDR11Q9BZH6 1224 aa9.52□□□□□ -0.89
CHFR-211ENST00000535897 FTOQ9C0B1 505 aaKnown RBP eCLIP9.52□□□□□ -0.89
CHFR-211ENST00000535897 NOD1Q9Y239 953 aa9.52□□□□□ -0.89
CHFR-211ENST00000535897 Q9Y3F1 56 aa9.52□□□□□ -0.89
CHFR-211ENST00000535897 PRRC2BQ5JSZ5 2229 aaKnown RBP9.52□□□□□ -0.89
CHFR-211ENST00000535897 RAD50Q92878 1312 aa9.52□□□□□ -0.89
CHFR-211ENST00000535897 SCN5AQ14524 2016 aa9.51□□□□□ -0.89
CHFR-211ENST00000535897 PTPDC1A2A3K4 754 aa9.51□□□□□ -0.89
CHFR-211ENST00000535897 ERC2O15083 957 aa9.51□□□□□ -0.89
CHFR-211ENST00000535897 RANBP6O60518 1105 aaKnown RBP9.51□□□□□ -0.89
CHFR-211ENST00000535897 NMT2O60551 498 aa9.51□□□□□ -0.89
CHFR-211ENST00000535897 ICAM1P05362 532 aa9.51□□□□□ -0.89
CHFR-211ENST00000535897 BMP1P13497 986 aa9.51□□□□□ -0.89
CHFR-211ENST00000535897 BAATQ14032 418 aaPredicted RBP9.51□□□□□ -0.89
CHFR-211ENST00000535897 DUSP28Q4G0W2 176 aa9.51□□□□□ -0.89
CHFR-211ENST00000535897 RASGRP2Q7LDG7 609 aa9.51□□□□□ -0.89
CHFR-211ENST00000535897 RETREG2Q8NC44 543 aa9.51□□□□□ -0.89
CHFR-211ENST00000535897 OR6J1Q8NGC5 347 aa9.51□□□□□ -0.89
CHFR-211ENST00000535897 PPP1R13LQ8WUF5 828 aa9.51□□□□□ -0.89
CHFR-211ENST00000535897 SLC9A7Q96T83 725 aa9.51□□□□□ -0.89
CHFR-211ENST00000535897 SEC62Q99442 399 aaKnown RBP9.51□□□□□ -0.89
CHFR-211ENST00000535897 MPHOSPH6Q99547 160 aaKnown RBP9.51□□□□□ -0.89
CHFR-211ENST00000535897 MTG1Q9BT17 334 aaPredicted RBP9.51□□□□□ -0.89
CHFR-211ENST00000535897 LCTP09848 1927 aa9.5□□□□□ -0.89
CHFR-211ENST00000535897 KIF28PB7ZC32 967 aa9.5□□□□□ -0.89
CHFR-211ENST00000535897 PLA2G6O60733 806 aa9.5□□□□□ -0.89
CHFR-211ENST00000535897 CALML3P27482 149 aa9.5□□□□□ -0.89
CHFR-211ENST00000535897 RFC2P35250 354 aa9.5□□□□□ -0.89
CHFR-211ENST00000535897 SLC16A2P36021 539 aa9.5□□□□□ -0.89
CHFR-211ENST00000535897 KCNJ6P48051 423 aa9.5□□□□□ -0.89
CHFR-211ENST00000535897 ALDH5A1P51649 535 aaPredicted RBP9.5□□□□□ -0.89
CHFR-211ENST00000535897 PURAQ00577 322 aaKnown RBP9.5□□□□□ -0.89
CHFR-211ENST00000535897 CTDSPL2Q05D32 466 aa9.5□□□□□ -0.89
CHFR-211ENST00000535897 PDE4DQ08499 809 aa9.5□□□□□ -0.89
CHFR-211ENST00000535897 PPP2R5BQ15173 497 aa9.5□□□□□ -0.89
CHFR-211ENST00000535897 KRT40Q6A162 431 aa9.5□□□□□ -0.89
CHFR-211ENST00000535897 TOMM22Q9NS69 142 aa9.5□□□□□ -0.89
CHFR-211ENST00000535897 HCN4Q9Y3Q4 1203 aa9.5□□□□□ -0.89
CHFR-211ENST00000535897 MTCH2Q9Y6C9 303 aa9.5□□□□□ -0.89
CHFR-211ENST00000535897 TANC1Q9C0D5 1861 aa9.5□□□□□ -0.89
CHFR-211ENST00000535897 NFIBO00712 420 aa9.49□□□□□ -0.89
CHFR-211ENST00000535897 TLL1O43897 1013 aa9.49□□□□□ -0.89
CHFR-211ENST00000535897 BFSP2Q13515 415 aa9.49□□□□□ -0.89
CHFR-211ENST00000535897 NBPF20Q3BBV1 942 aa9.49□□□□□ -0.89
CHFR-211ENST00000535897 SYDE2Q5VT97 1194 aa9.49□□□□□ -0.89
CHFR-211ENST00000535897 SLC30A10Q6XR72 485 aa9.49□□□□□ -0.89
CHFR-211ENST00000535897 RNF207Q6ZRF8 634 aa9.49□□□□□ -0.89
CHFR-211ENST00000535897 HERC6Q8IVU3 1022 aa9.49□□□□□ -0.89
CHFR-211ENST00000535897 DCAF4Q8WV16 495 aa9.49□□□□□ -0.89
CHFR-211ENST00000535897 HLA-CQ95604 372 aa9.49□□□□□ -0.89
CHFR-211ENST00000535897 VWCEQ96DN2 955 aa9.49□□□□□ -0.89
CHFR-211ENST00000535897 ZBED2Q9BTP6 218 aa9.49□□□□□ -0.89
CHFR-211ENST00000535897 GPCPD1Q9NPB8 672 aa9.49□□□□□ -0.89
CHFR-211ENST00000535897 INCENPQ9NQS7 918 aa9.49□□□□□ -0.89
CHFR-211ENST00000535897 IL17RBQ9NRM6 502 aa9.49□□□□□ -0.89
CHFR-211ENST00000535897 RCAN3Q9UKA8 241 aa9.49□□□□□ -0.89
CHFR-211ENST00000535897 COG5Q9UP83 839 aa9.49□□□□□ -0.89
CHFR-211ENST00000535897 FRMPD2Q68DX3 1309 aaPredicted RBP9.49□□□□□ -0.89
CHFR-211ENST00000535897 COL4A4P53420 1690 aaPredicted RBP9.48□□□□□ -0.89
CHFR-211ENST00000535897 EPOPA6NHQ4 379 aa9.48□□□□□ -0.89
CHFR-211ENST00000535897 PITPNM1O00562 1244 aa9.48□□□□□ -0.89
CHFR-211ENST00000535897 KPNA6O60684 536 aa9.48□□□□□ -0.89
CHFR-211ENST00000535897 IQCF3P0C7M6 154 aa9.48□□□□□ -0.89
CHFR-211ENST00000535897 TAP1Q03518 808 aa9.48□□□□□ -0.89
CHFR-211ENST00000535897 RRP12Q5JTH9 1297 aaKnown RBP9.48□□□□□ -0.89
CHFR-211ENST00000535897 C20orf194Q5TEA3 1177 aa9.48□□□□□ -0.89
CHFR-211ENST00000535897 TTBK2Q6IQ55 1244 aa9.48□□□□□ -0.89
CHFR-211ENST00000535897 NFRKBQ6P4R8 1299 aa9.48□□□□□ -0.89
CHFR-211ENST00000535897 MIER1Q8N108 512 aa9.48□□□□□ -0.89
CHFR-211ENST00000535897 CCDC155Q8N6L0 562 aa9.48□□□□□ -0.89
CHFR-211ENST00000535897 PHOSPHO2Q8TCD6 241 aa9.48□□□□□ -0.89
CHFR-211ENST00000535897 MORC4Q8TE76 937 aa9.48□□□□□ -0.89
CHFR-211ENST00000535897 SCFD2Q8WU76 684 aa9.48□□□□□ -0.89
CHFR-211ENST00000535897 RANBP17Q9H2T7 1088 aaKnown RBP9.48□□□□□ -0.89
CHFR-211ENST00000535897 EPHX3Q9H6B9 360 aa9.48□□□□□ -0.89
CHFR-211ENST00000535897 LOC102724159A0A0B4J2E5 919 aa9.47□□□□□ -0.89
CHFR-211ENST00000535897 B4DLN1 442 aa9.47□□□□□ -0.89
CHFR-211ENST00000535897 NKRFO15226 690 aaKnown RBP eCLIP9.47□□□□□ -0.89
CHFR-211ENST00000535897 BAIAP3O94812 1187 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms