RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 TIFAQ96CG3 184 aa15.5■□□□□ 0.07
CLSTN3-205ENST00000535452 GUCD1Q96NT3 240 aa15.5■□□□□ 0.07
CLSTN3-205ENST00000535452 WDR19Q8NEZ3 1342 aa15.49■□□□□ 0.07
CLSTN3-205ENST00000535452 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.49■□□□□ 0.07
CLSTN3-205ENST00000535452 ERICH2A1L162 156 aa15.49■□□□□ 0.07
CLSTN3-205ENST00000535452 MYL3P08590 195 aa15.49■□□□□ 0.07
CLSTN3-205ENST00000535452 ACTN1P12814 892 aa15.49■□□□□ 0.07
CLSTN3-205ENST00000535452 CDK7P50613 346 aa15.49■□□□□ 0.07
CLSTN3-205ENST00000535452 RAB30Q15771 203 aa15.49■□□□□ 0.07
CLSTN3-205ENST00000535452 USH1GQ495M9 461 aa15.49■□□□□ 0.07
CLSTN3-205ENST00000535452 DUSP28Q4G0W2 176 aa15.49■□□□□ 0.07
CLSTN3-205ENST00000535452 ASPRV1Q53RT3 343 aa15.49■□□□□ 0.07
CLSTN3-205ENST00000535452 TTBK2Q6IQ55 1244 aa15.49■□□□□ 0.07
CLSTN3-205ENST00000535452 SMC5Q8IY18 1101 aa15.49■□□□□ 0.07
CLSTN3-205ENST00000535452 RUFY2Q8WXA3 655 aa15.49■□□□□ 0.07
CLSTN3-205ENST00000535452 FGD4Q96M96 766 aa15.49■□□□□ 0.07
CLSTN3-205ENST00000535452 MAF1Q9H063 256 aa15.49■□□□□ 0.07
CLSTN3-205ENST00000535452 GNEQ9Y223 722 aaKnown RBP15.49■□□□□ 0.07
CLSTN3-205ENST00000535452 ABCB11O95342 1321 aa15.48■□□□□ 0.07
CLSTN3-205ENST00000535452 FGBP02675 491 aa15.48■□□□□ 0.07
CLSTN3-205ENST00000535452 PARP1P09874 1014 aaKnown RBP15.48■□□□□ 0.07
CLSTN3-205ENST00000535452 CSF2RAP15509 400 aa15.48■□□□□ 0.07
CLSTN3-205ENST00000535452 DNAJB2P25686 324 aa15.48■□□□□ 0.07
CLSTN3-205ENST00000535452 ITGB8P26012 769 aa15.48■□□□□ 0.07
CLSTN3-205ENST00000535452 NOVP48745 357 aa15.48■□□□□ 0.07
CLSTN3-205ENST00000535452 NKX3-2P78367 333 aa15.48■□□□□ 0.07
CLSTN3-205ENST00000535452 TTLL4Q14679 1199 aa15.48■□□□□ 0.07
CLSTN3-205ENST00000535452 ZNF589Q86UQ0 364 aaPredicted RBP15.48■□□□□ 0.07
CLSTN3-205ENST00000535452 RETREG2Q8NC44 543 aa15.48■□□□□ 0.07
CLSTN3-205ENST00000535452 PNMA1Q8ND90 353 aa15.48■□□□□ 0.07
CLSTN3-205ENST00000535452 IL27Q8NEV9 243 aa15.48■□□□□ 0.07
CLSTN3-205ENST00000535452 SYMPKQ92797 1274 aaKnown RBP15.48■□□□□ 0.07
CLSTN3-205ENST00000535452 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.48■□□□□ 0.072e-7■■■□□ 16.1
CLSTN3-205ENST00000535452 ZKSCAN3Q9BRR0 538 aa15.48■□□□□ 0.07
CLSTN3-205ENST00000535452 MTG1Q9BT17 334 aaPredicted RBP15.48■□□□□ 0.07
CLSTN3-205ENST00000535452 IL23AQ9NPF7 189 aa15.48■□□□□ 0.07
CLSTN3-205ENST00000535452 ZBBXA8MT70 800 aa15.47■□□□□ 0.07
CLSTN3-205ENST00000535452 NFIBO00712 420 aa15.47■□□□□ 0.07
CLSTN3-205ENST00000535452 KDM4AO75164 1064 aa15.47■□□□□ 0.07
CLSTN3-205ENST00000535452 PFKMP08237 780 aa15.47■□□□□ 0.07
CLSTN3-205ENST00000535452 CHMP4BP1P59074 171 aa15.47■□□□□ 0.07
CLSTN3-205ENST00000535452 NUCB1Q02818 461 aa15.47■□□□□ 0.07
CLSTN3-205ENST00000535452 SART3Q15020 963 aaKnown RBP15.47■□□□□ 0.07
CLSTN3-205ENST00000535452 CCDC155Q8N6L0 562 aa15.47■□□□□ 0.07
CLSTN3-205ENST00000535452 MYLIPQ8WY64 445 aa15.47■□□□□ 0.07
CLSTN3-205ENST00000535452 ZSCAN10Q96SZ4 725 aaPredicted RBP15.47■□□□□ 0.07
CLSTN3-205ENST00000535452 DSCC1Q9BVC3 393 aa15.47■□□□□ 0.07
CLSTN3-205ENST00000535452 KATNBL1Q9H079 304 aa15.47■□□□□ 0.07
CLSTN3-205ENST00000535452 TSPYL2Q9H2G4 693 aaPredicted RBP15.47■□□□□ 0.07
CLSTN3-205ENST00000535452 OSBPL3Q9H4L5 887 aa15.47■□□□□ 0.07
CLSTN3-205ENST00000535452 ZNF576Q9H609 170 aa15.47■□□□□ 0.07
CLSTN3-205ENST00000535452 PDGFCQ9NRA1 345 aa15.47■□□□□ 0.07
CLSTN3-205ENST00000535452 MRPL11Q9Y3B7 192 aaKnown RBP15.47■□□□□ 0.07
CLSTN3-205ENST00000535452 FOXP2O15409 715 aa15.46■□□□□ 0.07
CLSTN3-205ENST00000535452 ADCY6O43306 1168 aa15.46■□□□□ 0.07
CLSTN3-205ENST00000535452 ACRP10323 421 aa15.46■□□□□ 0.07
CLSTN3-205ENST00000535452 TXNP10599 105 aaKnown RBP15.46■□□□□ 0.07
CLSTN3-205ENST00000535452 CYP2C18P33260 490 aa15.46■□□□□ 0.07
CLSTN3-205ENST00000535452 RPS6P62753 249 aaKnown RBP15.46■□□□□ 0.07
CLSTN3-205ENST00000535452 CDC37Q16543 378 aaPredicted RBP15.46■□□□□ 0.07
CLSTN3-205ENST00000535452 IFIT1BQ5T764 474 aaKnown RBP15.46■□□□□ 0.07
CLSTN3-205ENST00000535452 TAPT1Q6NXT6 567 aa15.46■□□□□ 0.07
CLSTN3-205ENST00000535452 SLC28A3Q9HAS3 691 aa15.46■□□□□ 0.07
CLSTN3-205ENST00000535452 B4E1Z4 1266 aa15.45■□□□□ 0.06
CLSTN3-205ENST00000535452 GOLGA8HP0CJ92 632 aa15.45■□□□□ 0.06
CLSTN3-205ENST00000535452 EPHB4P54760 987 aa15.45■□□□□ 0.06
CLSTN3-205ENST00000535452 STXBP2Q15833 593 aa15.45■□□□□ 0.06
CLSTN3-205ENST00000535452 SLC30A10Q6XR72 485 aa15.45■□□□□ 0.06
CLSTN3-205ENST00000535452 ZNF365Q70YC5 407 aa15.45■□□□□ 0.06
CLSTN3-205ENST00000535452 RASGRP2Q7LDG7 609 aa15.45■□□□□ 0.06
CLSTN3-205ENST00000535452 RALYLQ86SE5 291 aaKnown RBP15.45■□□□□ 0.06
CLSTN3-205ENST00000535452 TBC1D10CQ8IV04 446 aa15.45■□□□□ 0.06
CLSTN3-205ENST00000535452 PLEKHM2Q8IWE5 1019 aa15.45■□□□□ 0.06
CLSTN3-205ENST00000535452 MORC4Q8TE76 937 aa15.45■□□□□ 0.06
CLSTN3-205ENST00000535452 NSUN6Q8TEA1 469 aaKnown RBP15.45■□□□□ 0.06
CLSTN3-205ENST00000535452 SLC4A7Q9Y6M7 1214 aa15.45■□□□□ 0.06
CLSTN3-205ENST00000535452 CD4P01730 458 aa15.44■□□□□ 0.06
CLSTN3-205ENST00000535452 CCL23P55773 120 aa15.44■□□□□ 0.06
CLSTN3-205ENST00000535452 PSMC6P62333 389 aa15.44■□□□□ 0.06
CLSTN3-205ENST00000535452 IRX5P78411 483 aaPredicted RBP15.44■□□□□ 0.06
CLSTN3-205ENST00000535452 BFSP2Q13515 415 aa15.44■□□□□ 0.06
CLSTN3-205ENST00000535452 TMEM240Q5SV17 173 aa15.44■□□□□ 0.06
CLSTN3-205ENST00000535452 ARHGEF16Q5VV41 709 aa15.44■□□□□ 0.06
CLSTN3-205ENST00000535452 FBXO11Q86XK2 927 aa15.44■□□□□ 0.06
CLSTN3-205ENST00000535452 RGS22Q8NE09 1264 aa15.44■□□□□ 0.06
CLSTN3-205ENST00000535452 UBA5Q9GZZ9 404 aa15.44■□□□□ 0.06
CLSTN3-205ENST00000535452 ALDH8A1Q9H2A2 487 aaPredicted RBP15.44■□□□□ 0.06
CLSTN3-205ENST00000535452 VAT1LQ9HCJ6 419 aa15.44■□□□□ 0.06
CLSTN3-205ENST00000535452 U3KPZ7 1027 aaPredicted RBP15.44■□□□□ 0.06
CLSTN3-205ENST00000535452 SZT2Q5T011 3432 aa15.44■□□□□ 0.06
CLSTN3-205ENST00000535452 TNKSO95271 1327 aa15.43■□□□□ 0.06
CLSTN3-205ENST00000535452 NEDD4P46934 1319 aa15.43■□□□□ 0.06
CLSTN3-205ENST00000535452 B4GALT4O60513 344 aa15.43■□□□□ 0.06
CLSTN3-205ENST00000535452 SNHG28P0DPA3 235 aa15.43■□□□□ 0.06
CLSTN3-205ENST00000535452 RFC2P35250 354 aa15.43■□□□□ 0.06
CLSTN3-205ENST00000535452 PTPN11Q06124 597 aaPredicted RBP15.43■□□□□ 0.06
CLSTN3-205ENST00000535452 OTOP2Q7RTS6 562 aa15.43■□□□□ 0.06
CLSTN3-205ENST00000535452 SLC43A3Q8NBI5 491 aa15.43■□□□□ 0.06
CLSTN3-205ENST00000535452 HERVK_113Q902F9 699 aa15.43■□□□□ 0.06
CLSTN3-205ENST00000535452 IWS1Q96ST2 819 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms