RNA–Protein interactions for RNA: ENST00000534625.1

ATM-224, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-224ENST00000534625 COL19A1Q14993 1142 aa6.75□□□□□ -1.33
ATM-224ENST00000534625 KIF4BQ2VIQ3 1234 aa6.75□□□□□ -1.33
ATM-224ENST00000534625 ZNF765Q7L2R6 523 aa6.75□□□□□ -1.33
ATM-224ENST00000534625 CCDC146Q8IYE0 955 aa6.75□□□□□ -1.33
ATM-224ENST00000534625 RTKN2Q8IZC4 609 aa6.75□□□□□ -1.33
ATM-224ENST00000534625 SYNE4Q8N205 404 aa6.75□□□□□ -1.33
ATM-224ENST00000534625 FANCD2OSQ96PS1 177 aa6.75□□□□□ -1.33
ATM-224ENST00000534625 KRT82Q9NSB4 513 aa6.75□□□□□ -1.33
ATM-224ENST00000534625 SNED1Q8TER0 1413 aa6.75□□□□□ -1.33
ATM-224ENST00000534625 IBTKQ9P2D0 1353 aaPredicted RBP6.74□□□□□ -1.33
ATM-224ENST00000534625 FZD9O00144 591 aa6.74□□□□□ -1.33
ATM-224ENST00000534625 CHL1O00533 1208 aa6.74□□□□□ -1.33
ATM-224ENST00000534625 LMOD3Q0VAK6 560 aa6.74□□□□□ -1.33
ATM-224ENST00000534625 KRT24Q2M2I5 525 aa6.74□□□□□ -1.33
ATM-224ENST00000534625 LCE4AQ5TA78 99 aa6.74□□□□□ -1.33
ATM-224ENST00000534625 TP53INP2Q8IXH6 220 aa6.74□□□□□ -1.33
ATM-224ENST00000534625 C3orf58Q8NDZ4 430 aa6.74□□□□□ -1.33
ATM-224ENST00000534625 RUNDC1Q96C34 613 aa6.74□□□□□ -1.33
ATM-224ENST00000534625 CRAMP1Q96RY5 1269 aa6.74□□□□□ -1.33
ATM-224ENST00000534625 DISC1Q9NRI5 854 aa6.74□□□□□ -1.33
ATM-224ENST00000534625 TMEM39AQ9NV64 488 aa6.74□□□□□ -1.33
ATM-224ENST00000534625 ZC3H7BQ9UGR2 993 aaKnown RBP6.74□□□□□ -1.33
ATM-224ENST00000534625 GPN3Q9UHW5 284 aaPredicted RBP6.74□□□□□ -1.33
ATM-224ENST00000534625 DAGLAQ9Y4D2 1042 aa6.74□□□□□ -1.33
ATM-224ENST00000534625 RIC1Q4ADV7 1423 aa6.74□□□□□ -1.33
ATM-224ENST00000534625 ZNF541Q9H0D2 1346 aa6.74□□□□□ -1.33
ATM-224ENST00000534625 XRCC5P13010 732 aaKnown RBP6.73□□□□□ -1.33
ATM-224ENST00000534625 IARSP41252 1262 aaKnown RBP6.73□□□□□ -1.33
ATM-224ENST00000534625 PARP10Q53GL7 1025 aa6.73□□□□□ -1.33
ATM-224ENST00000534625 SLC10A5Q5PT55 438 aa6.73□□□□□ -1.33
ATM-224ENST00000534625 OGFOD3Q6PK18 319 aa6.73□□□□□ -1.33
ATM-224ENST00000534625 COPS6Q7L5N1 327 aa6.73□□□□□ -1.33
ATM-224ENST00000534625 PPP1R42Q7Z4L9 355 aa6.73□□□□□ -1.33
ATM-224ENST00000534625 XAGE3Q8WTP9 111 aa6.73□□□□□ -1.33
ATM-224ENST00000534625 RPGRQ92834 1020 aaKnown RBP6.73□□□□□ -1.33
ATM-224ENST00000534625 RBM17Q96I25 401 aaKnown RBP6.73□□□□□ -1.33
ATM-224ENST00000534625 PSMD1Q99460 953 aa6.73□□□□□ -1.33
ATM-224ENST00000534625 UTP14AQ9BVJ6 771 aaKnown RBP6.73□□□□□ -1.33
ATM-224ENST00000534625 TAF1DQ9H5J8 278 aaPredicted RBP6.73□□□□□ -1.33
ATM-224ENST00000534625 SCN4AP35499 1836 aa6.72□□□□□ -1.33
ATM-224ENST00000534625 IQCA1LA6NCM1 817 aa6.72□□□□□ -1.33
ATM-224ENST00000534625 ITGB5P18084 799 aa6.72□□□□□ -1.33
ATM-224ENST00000534625 ID3Q02535 119 aa6.72□□□□□ -1.33
ATM-224ENST00000534625 PPP2R3AQ06190 1150 aa6.72□□□□□ -1.33
ATM-224ENST00000534625 FMR1Q06787 632 aaKnown RBP eCLIP6.72□□□□□ -1.33
ATM-224ENST00000534625 AIMP1Q12904 312 aaKnown RBP6.72□□□□□ -1.33
ATM-224ENST00000534625 TCIRG1Q13488 830 aa6.72□□□□□ -1.33
ATM-224ENST00000534625 WDR43Q15061 677 aaKnown RBP eCLIP6.72□□□□□ -1.33
ATM-224ENST00000534625 DUSP27Q5VZP5 1158 aa6.72□□□□□ -1.33
ATM-224ENST00000534625 NLRP10Q86W26 655 aa6.72□□□□□ -1.33
ATM-224ENST00000534625 LDHDQ86WU2 507 aa6.72□□□□□ -1.33
ATM-224ENST00000534625 SULF2Q8IWU5 870 aa6.72□□□□□ -1.33
ATM-224ENST00000534625 FBXL18Q96ME1 805 aa6.72□□□□□ -1.33
ATM-224ENST00000534625 OSBPL7Q9BZF2 842 aa6.72□□□□□ -1.33
ATM-224ENST00000534625 PRKRIP1Q9H875 184 aaPredicted RBP6.72□□□□□ -1.33
ATM-224ENST00000534625 DDX21Q9NR30 783 aaKnown RBP eCLIP6.72□□□□□ -1.33
ATM-224ENST00000534625 PPP4R2Q9NY27 417 aa6.72□□□□□ -1.33
ATM-224ENST00000534625 CACNA2D2Q9NY47 1150 aa6.72□□□□□ -1.33
ATM-224ENST00000534625 AKAP2Q9Y2D5 859 aa6.72□□□□□ -1.33
ATM-224ENST00000534625 LAS1LQ9Y4W2 734 aaKnown RBP6.72□□□□□ -1.33
ATM-224ENST00000534625 IVNS1ABPQ9Y6Y0 642 aa6.72□□□□□ -1.33
ATM-224ENST00000534625 PASKQ96RG2 1323 aa6.72□□□□□ -1.33
ATM-224ENST00000534625 COL4A5P29400 1685 aa6.71□□□□□ -1.33
ATM-224ENST00000534625 TCERG1O14776 1098 aaKnown RBP6.71□□□□□ -1.34
ATM-224ENST00000534625 SLFN14P0C7P3 912 aa6.71□□□□□ -1.34
ATM-224ENST00000534625 HCLS1P14317 486 aaPredicted RBP6.71□□□□□ -1.34
ATM-224ENST00000534625 ARNTP27540 789 aa6.71□□□□□ -1.34
ATM-224ENST00000534625 ZNF252P-AS1Q0IIN9 211 aa6.71□□□□□ -1.34
ATM-224ENST00000534625 HSP90AB3PQ58FF7 597 aa6.71□□□□□ -1.34
ATM-224ENST00000534625 VSIG10LQ86VR7 867 aa6.71□□□□□ -1.34
ATM-224ENST00000534625 GPC2Q8N158 579 aa6.71□□□□□ -1.34
ATM-224ENST00000534625 JDP2Q8WYK2 163 aa6.71□□□□□ -1.34
ATM-224ENST00000534625 KCNB2Q92953 911 aa6.71□□□□□ -1.34
ATM-224ENST00000534625 ATXN3LQ9H3M9 355 aa6.71□□□□□ -1.34
ATM-224ENST00000534625 BSDC1Q9NW68 430 aaPredicted RBP6.71□□□□□ -1.34
ATM-224ENST00000534625 CHPF2Q9P2E5 772 aa6.71□□□□□ -1.34
ATM-224ENST00000534625 HACL1Q9UJ83 578 aa6.71□□□□□ -1.34
ATM-224ENST00000534625 ATP6V0A2Q9Y487 856 aa6.71□□□□□ -1.34
ATM-224ENST00000534625 ABCC4O15439 1325 aa6.71□□□□□ -1.34
ATM-224ENST00000534625 RNF123Q5XPI4 1314 aa6.71□□□□□ -1.34
ATM-224ENST00000534625 APAF1O14727 1248 aa6.7□□□□□ -1.34
ATM-224ENST00000534625 HOXB7P09629 217 aa6.7□□□□□ -1.34
ATM-224ENST00000534625 ZNF853P0CG23 659 aa6.7□□□□□ -1.34
ATM-224ENST00000534625 EPHX2P34913 555 aa6.7□□□□□ -1.34
ATM-224ENST00000534625 CYP27A1Q02318 531 aa6.7□□□□□ -1.34
ATM-224ENST00000534625 CDK5R2Q13319 367 aa6.7□□□□□ -1.34
ATM-224ENST00000534625 TTLL4Q14679 1199 aa6.7□□□□□ -1.34
ATM-224ENST00000534625 EAPPQ56P03 285 aaPredicted RBP6.7□□□□□ -1.34
ATM-224ENST00000534625 WFDC3Q8IUB2 231 aa6.7□□□□□ -1.34
ATM-224ENST00000534625 PLBD2Q8NHP8 589 aa6.7□□□□□ -1.34
ATM-224ENST00000534625 ZNF428Q96B54 188 aa6.7□□□□□ -1.34
ATM-224ENST00000534625 NECAB3Q96P71 396 aaPredicted RBP6.7□□□□□ -1.34
ATM-224ENST00000534625 ISCA1Q9BUE6 129 aa6.7□□□□□ -1.34
ATM-224ENST00000534625 RTFDC1Q9BY42 306 aaPredicted RBP6.7□□□□□ -1.34
ATM-224ENST00000534625 LRRC4CQ9HCJ2 640 aa6.7□□□□□ -1.34
ATM-224ENST00000534625 TRMT112Q9UI30 125 aaKnown RBP6.7□□□□□ -1.34
ATM-224ENST00000534625 U3KQE9 123 aa6.7□□□□□ -1.34
ATM-224ENST00000534625 BBOX1O75936 387 aa6.69□□□□□ -1.34
ATM-224ENST00000534625 JUNBP17275 347 aaPredicted RBP6.69□□□□□ -1.34
ATM-224ENST00000534625 BMP6P22004 513 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms