RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 TNFAIP2Q03169 654 aa16.42■□□□□ 0.22
SF3B2-215ENST00000534307 TLE2Q04725 743 aa16.42■□□□□ 0.22
SF3B2-215ENST00000534307 TRDNQ13061 729 aa16.42■□□□□ 0.22
SF3B2-215ENST00000534307 BMP2KLQ5H9B9 411 aa16.42■□□□□ 0.22
SF3B2-215ENST00000534307 RNF207Q6ZRF8 634 aa16.42■□□□□ 0.22
SF3B2-215ENST00000534307 STAG2Q8N3U4 1231 aa16.42■□□□□ 0.22
SF3B2-215ENST00000534307 RGS22Q8NE09 1264 aa16.42■□□□□ 0.22
SF3B2-215ENST00000534307 MAF1Q9H063 256 aa16.42■□□□□ 0.22
SF3B2-215ENST00000534307 LSG1Q9H089 658 aaKnown RBP16.42■□□□□ 0.22
SF3B2-215ENST00000534307 JMJD4Q9H9V9 463 aa16.42■□□□□ 0.22
SF3B2-215ENST00000534307 VTA1Q9NP79 307 aa16.42■□□□□ 0.22
SF3B2-215ENST00000534307 PDGFCQ9NRA1 345 aa16.42■□□□□ 0.22
SF3B2-215ENST00000534307 ADD3Q9UEY8 706 aaKnown RBP16.42■□□□□ 0.22
SF3B2-215ENST00000534307 MAD2L2Q9UI95 211 aa16.42■□□□□ 0.22
SF3B2-215ENST00000534307 RBM8AQ9Y5S9 174 aaKnown RBP16.42■□□□□ 0.22
SF3B2-215ENST00000534307 MYO9BQ13459 2157 aa16.42■□□□□ 0.22
SF3B2-215ENST00000534307 MYH6P13533 1939 aa16.41■□□□□ 0.22
SF3B2-215ENST00000534307 TRIM43BA6NCK2 446 aa16.41■□□□□ 0.22
SF3B2-215ENST00000534307 PALM3A6NDB9 673 aaPredicted RBP16.41■□□□□ 0.22
SF3B2-215ENST00000534307 ASGR1P07306 291 aa16.41■□□□□ 0.22
SF3B2-215ENST00000534307 SMPD1P17405 629 aa16.41■□□□□ 0.22
SF3B2-215ENST00000534307 PTGS1P23219 599 aa16.41■□□□□ 0.22
SF3B2-215ENST00000534307 ANTXR2P58335 489 aa16.41■□□□□ 0.22
SF3B2-215ENST00000534307 SLC35G1Q2M3R5 365 aa16.41■□□□□ 0.22
SF3B2-215ENST00000534307 QRICH1Q2TAL8 776 aa16.41■□□□□ 0.22
SF3B2-215ENST00000534307 USH1GQ495M9 461 aa16.41■□□□□ 0.22
SF3B2-215ENST00000534307 TMEM63BQ5T3F8 832 aa16.41■□□□□ 0.22
SF3B2-215ENST00000534307 ANKRD33Q7Z3H0 272 aa16.41■□□□□ 0.22
SF3B2-215ENST00000534307 SH3RF1Q7Z6J0 888 aa16.41■□□□□ 0.22
SF3B2-215ENST00000534307 MB21D2Q8IYB1 491 aaPredicted RBP16.41■□□□□ 0.22
SF3B2-215ENST00000534307 NCOA7Q8NI08 942 aa16.41■□□□□ 0.22
SF3B2-215ENST00000534307 NUP133Q8WUM0 1156 aa16.41■□□□□ 0.22
SF3B2-215ENST00000534307 TRIM43Q96BQ3 446 aaPredicted RBP16.41■□□□□ 0.22
SF3B2-215ENST00000534307 MTMR8Q96EF0 704 aa16.41■□□□□ 0.22
SF3B2-215ENST00000534307 ESYT1Q9BSJ8 1104 aa16.41■□□□□ 0.22
SF3B2-215ENST00000534307 SENP2Q9HC62 589 aa16.41■□□□□ 0.22
SF3B2-215ENST00000534307 CHD9Q3L8U1 2897 aa16.41■□□□□ 0.22
SF3B2-215ENST00000534307 ELP1O95163 1332 aa16.41■□□□□ 0.22
SF3B2-215ENST00000534307 ABCB11O95342 1321 aa16.41■□□□□ 0.22
SF3B2-215ENST00000534307 RBM47A0AV96 593 aaKnown RBP16.4■□□□□ 0.22
SF3B2-215ENST00000534307 CALML3P27482 149 aa16.4■□□□□ 0.22
SF3B2-215ENST00000534307 GNASQ5JWF2 1037 aa16.4■□□□□ 0.22
SF3B2-215ENST00000534307 IQSEC1Q6DN90 963 aa16.4■□□□□ 0.22
SF3B2-215ENST00000534307 EEPD1Q7L9B9 569 aa16.4■□□□□ 0.22
SF3B2-215ENST00000534307 RALYLQ86SE5 291 aaKnown RBP16.4■□□□□ 0.22
SF3B2-215ENST00000534307 TLK2Q86UE8 772 aa16.4■□□□□ 0.22
SF3B2-215ENST00000534307 PCSK9Q8NBP7 692 aaKnown RBP16.4■□□□□ 0.22
SF3B2-215ENST00000534307 DNERQ8NFT8 737 aa16.4■□□□□ 0.22
SF3B2-215ENST00000534307 TOX2Q96NM4 488 aa16.4■□□□□ 0.22
SF3B2-215ENST00000534307 SPC25Q9HBM1 224 aa16.4■□□□□ 0.22
SF3B2-215ENST00000534307 STARD7Q9NQZ5 370 aa16.4■□□□□ 0.22
SF3B2-215ENST00000534307 KLRF2D3W0D1 207 aa16.39■□□□□ 0.21
SF3B2-215ENST00000534307 IFIT3O14879 490 aaKnown RBP16.39■□□□□ 0.21
SF3B2-215ENST00000534307 CDK7P50613 346 aa16.39■□□□□ 0.21
SF3B2-215ENST00000534307 TROAPQ12815 778 aa16.39■□□□□ 0.21
SF3B2-215ENST00000534307 COL9A3Q14050 684 aaPredicted RBP16.39■□□□□ 0.21
SF3B2-215ENST00000534307 GRM4Q14833 912 aa16.39■□□□□ 0.21
SF3B2-215ENST00000534307 IGDCC4Q8TDY8 1250 aa16.39■□□□□ 0.21
SF3B2-215ENST00000534307 MYLIPQ8WY64 445 aa16.39■□□□□ 0.21
SF3B2-215ENST00000534307 TBC1D5Q92609 795 aa16.39■□□□□ 0.21
SF3B2-215ENST00000534307 GLT1D1Q96MS3 346 aa16.39■□□□□ 0.21
SF3B2-215ENST00000534307 LBHD1Q9BQE6 289 aaPredicted RBP16.39■□□□□ 0.21
SF3B2-215ENST00000534307 TTYH1Q9H313 450 aaPredicted RBP16.39■□□□□ 0.21
SF3B2-215ENST00000534307 PRKAG2Q9UGJ0 569 aa16.39■□□□□ 0.21
SF3B2-215ENST00000534307 Q9Y3F1 56 aa16.39■□□□□ 0.21
SF3B2-215ENST00000534307 XIRP2A4UGR9 3374 aa16.39■□□□□ 0.21
SF3B2-215ENST00000534307 OPLAHO14841 1288 aa16.38■□□□□ 0.21
SF3B2-215ENST00000534307 KIAA0355O15063 1070 aa16.38■□□□□ 0.21
SF3B2-215ENST00000534307 PQBP1O60828 265 aaKnown RBP16.38■□□□□ 0.21
SF3B2-215ENST00000534307 PPP1R11O60927 126 aaPredicted RBP16.38■□□□□ 0.21
SF3B2-215ENST00000534307 CLTBP09497 229 aa16.38■□□□□ 0.21
SF3B2-215ENST00000534307 ITGB8P26012 769 aa16.38■□□□□ 0.21
SF3B2-215ENST00000534307 BEX3Q00994 111 aa16.38■□□□□ 0.21
SF3B2-215ENST00000534307 GHRHRQ02643 423 aa16.38■□□□□ 0.21
SF3B2-215ENST00000534307 FAAP100Q0VG06 881 aa16.38■□□□□ 0.21
SF3B2-215ENST00000534307 DUSP28Q4G0W2 176 aa16.38■□□□□ 0.21
SF3B2-215ENST00000534307 CHST3Q7LGC8 479 aa16.38■□□□□ 0.21
SF3B2-215ENST00000534307 SEMA6BQ9H3T3 888 aa16.38■□□□□ 0.21
SF3B2-215ENST00000534307 PRDM5Q9NQX1 630 aaPredicted RBP16.38■□□□□ 0.21
SF3B2-215ENST00000534307 COL20A1Q9P218 1284 aa16.38■□□□□ 0.21
SF3B2-215ENST00000534307 CHD7Q9P2D1 2997 aa16.37■□□□□ 0.21
SF3B2-215ENST00000534307 WTAPQ15007 396 aa16.37■□□□□ 0.21
SF3B2-215ENST00000534307 NECTIN1Q15223 517 aa16.37■□□□□ 0.21
SF3B2-215ENST00000534307 FSCN1Q16658 493 aaKnown RBP16.37■□□□□ 0.21
SF3B2-215ENST00000534307 C9orf50Q5SZB4 431 aa16.37■□□□□ 0.21
SF3B2-215ENST00000534307 KIAA1211Q6ZU35 1233 aa16.37■□□□□ 0.21
SF3B2-215ENST00000534307 NOL8Q76FK4 1167 aaKnown RBP16.37■□□□□ 0.21
SF3B2-215ENST00000534307 FBXO11Q86XK2 927 aa16.37■□□□□ 0.21
SF3B2-215ENST00000534307 SLC43A3Q8NBI5 491 aa16.37■□□□□ 0.21
SF3B2-215ENST00000534307 SYTL5Q8TDW5 730 aaPredicted RBP16.37■□□□□ 0.21
SF3B2-215ENST00000534307 MTA3Q9BTC8 594 aa16.37■□□□□ 0.21
SF3B2-215ENST00000534307 RIOX1Q9H6W3 641 aa16.37■□□□□ 0.21
SF3B2-215ENST00000534307 VAT1LQ9HCJ6 419 aa16.37■□□□□ 0.21
SF3B2-215ENST00000534307 A0A0U1RQG5 324 aaPredicted RBP16.36■□□□□ 0.21
SF3B2-215ENST00000534307 ERICH2A1L162 156 aa16.36■□□□□ 0.21
SF3B2-215ENST00000534307 SLC27A2O14975 620 aa16.36■□□□□ 0.21
SF3B2-215ENST00000534307 ZBTB5O15062 677 aa16.36■□□□□ 0.21
SF3B2-215ENST00000534307 DYNC1LI2O43237 492 aaPredicted RBP16.36■□□□□ 0.21
SF3B2-215ENST00000534307 CYTH3O43739 400 aa16.36■□□□□ 0.21
SF3B2-215ENST00000534307 DHX16O60231 1041 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms