RNA–Protein interactions for RNA: ENST00000531885.5

CMTM1-215, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-215ENST00000531885 TNKSO95271 1327 aa13.66□□□□□ -0.22
CMTM1-215ENST00000531885 B4DLN1 442 aa13.66□□□□□ -0.22
CMTM1-215ENST00000531885 MYL3P08590 195 aa13.66□□□□□ -0.22
CMTM1-215ENST00000531885 MRPL12P52815 198 aaKnown RBP13.66□□□□□ -0.22
CMTM1-215ENST00000531885 DUSP28Q4G0W2 176 aa13.66□□□□□ -0.22
CMTM1-215ENST00000531885 SCLYQ96I15 445 aa13.66□□□□□ -0.22
CMTM1-215ENST00000531885 SLC9A7Q96T83 725 aa13.66□□□□□ -0.22
CMTM1-215ENST00000531885 WDR11Q9BZH6 1224 aa13.66□□□□□ -0.22
CMTM1-215ENST00000531885 WNT8AQ9H1J5 351 aa13.66□□□□□ -0.22
CMTM1-215ENST00000531885 PDGFCQ9NRA1 345 aa13.66□□□□□ -0.22
CMTM1-215ENST00000531885 PRR12Q9ULL5 1215 aa13.66□□□□□ -0.22
CMTM1-215ENST00000531885 NOD1Q9Y239 953 aa13.66□□□□□ -0.22
CMTM1-215ENST00000531885 GRIN2DO15399 1336 aa13.65□□□□□ -0.22
CMTM1-215ENST00000531885 PTPDC1A2A3K4 754 aa13.65□□□□□ -0.22
CMTM1-215ENST00000531885 RANBP6O60518 1105 aaKnown RBP13.65□□□□□ -0.22
CMTM1-215ENST00000531885 KPNA6O60684 536 aa13.65□□□□□ -0.22
CMTM1-215ENST00000531885 ICAM1P05362 532 aa13.65□□□□□ -0.22
CMTM1-215ENST00000531885 TSHZ3Q63HK5 1081 aa13.65□□□□□ -0.22
CMTM1-215ENST00000531885 TAPT1Q6NXT6 567 aa13.65□□□□□ -0.22
CMTM1-215ENST00000531885 DEFB128Q7Z7B8 93 aa13.65□□□□□ -0.22
CMTM1-215ENST00000531885 OR6J1Q8NGC5 347 aa13.65□□□□□ -0.22
CMTM1-215ENST00000531885 DCAF4Q8WV16 495 aa13.65□□□□□ -0.22
CMTM1-215ENST00000531885 MTG1Q9BT17 334 aaPredicted RBP13.65□□□□□ -0.22
CMTM1-215ENST00000531885 FTOQ9C0B1 505 aaKnown RBP eCLIP13.65□□□□□ -0.22
CMTM1-215ENST00000531885 ZBTB47Q9UFB7 747 aaPredicted RBP13.65□□□□□ -0.22
CMTM1-215ENST00000531885 RCAN3Q9UKA8 241 aa13.65□□□□□ -0.22
CMTM1-215ENST00000531885 COG5Q9UP83 839 aa13.65□□□□□ -0.22
CMTM1-215ENST00000531885 TTC41PQ6P2S7 1318 aa13.64□□□□□ -0.23
CMTM1-215ENST00000531885 LRRC37A2A6NM11 1700 aa13.64□□□□□ -0.23
CMTM1-215ENST00000531885 NKRFO15226 690 aaKnown RBP eCLIP13.64□□□□□ -0.23
CMTM1-215ENST00000531885 CYP2C9P11712 490 aa13.64□□□□□ -0.23
CMTM1-215ENST00000531885 PLA2G5P39877 138 aa13.64□□□□□ -0.23
CMTM1-215ENST00000531885 SNAP25P60880 206 aa13.64□□□□□ -0.23
CMTM1-215ENST00000531885 PDE4DQ08499 809 aa13.64□□□□□ -0.23
CMTM1-215ENST00000531885 BFSP2Q13515 415 aa13.64□□□□□ -0.23
CMTM1-215ENST00000531885 PPP2R5BQ15173 497 aa13.64□□□□□ -0.23
CMTM1-215ENST00000531885 MUM1L1Q5H9M0 696 aa13.64□□□□□ -0.23
CMTM1-215ENST00000531885 CCDC155Q8N6L0 562 aa13.64□□□□□ -0.23
CMTM1-215ENST00000531885 PHOSPHO2Q8TCD6 241 aa13.64□□□□□ -0.23
CMTM1-215ENST00000531885 TOMM22Q9NS69 142 aa13.64□□□□□ -0.23
CMTM1-215ENST00000531885 TRMT13Q9NUP7 481 aaKnown RBP13.64□□□□□ -0.23
CMTM1-215ENST00000531885 PITPNM1O00562 1244 aa13.63□□□□□ -0.23
CMTM1-215ENST00000531885 CA3P07451 260 aa13.63□□□□□ -0.23
CMTM1-215ENST00000531885 MYOGP15173 224 aa13.63□□□□□ -0.23
CMTM1-215ENST00000531885 KCNJ6P48051 423 aa13.63□□□□□ -0.23
CMTM1-215ENST00000531885 ALDH5A1P51649 535 aaPredicted RBP13.63□□□□□ -0.23
CMTM1-215ENST00000531885 PURAQ00577 322 aaKnown RBP13.63□□□□□ -0.23
CMTM1-215ENST00000531885 BAATQ14032 418 aaPredicted RBP13.63□□□□□ -0.23
CMTM1-215ENST00000531885 TTLL4Q14679 1199 aa13.63□□□□□ -0.23
CMTM1-215ENST00000531885 MORC4Q8TE76 937 aa13.63□□□□□ -0.23
CMTM1-215ENST00000531885 HCN4Q9Y3Q4 1203 aa13.63□□□□□ -0.23
CMTM1-215ENST00000531885 TCF20Q9UGU0 1960 aaKnown RBP13.63□□□□□ -0.23
CMTM1-215ENST00000531885 CALML3P27482 149 aa13.62□□□□□ -0.23
CMTM1-215ENST00000531885 TFF2Q03403 129 aa13.62□□□□□ -0.23
CMTM1-215ENST00000531885 PTPN11Q06124 597 aaPredicted RBP13.62□□□□□ -0.23
CMTM1-215ENST00000531885 SYDE2Q5VT97 1194 aa13.62□□□□□ -0.23
CMTM1-215ENST00000531885 NFRKBQ6P4R8 1299 aa13.62□□□□□ -0.23
CMTM1-215ENST00000531885 SCFD2Q8WU76 684 aa13.62□□□□□ -0.23
CMTM1-215ENST00000531885 ARNTL2Q8WYA1 636 aa13.62□□□□□ -0.23
CMTM1-215ENST00000531885 SEC62Q99442 399 aaKnown RBP13.62□□□□□ -0.23
CMTM1-215ENST00000531885 RANBP17Q9H2T7 1088 aaKnown RBP13.62□□□□□ -0.23
CMTM1-215ENST00000531885 DCTPP1Q9H773 170 aa13.62□□□□□ -0.23
CMTM1-215ENST00000531885 BAIAP3O94812 1187 aa13.61□□□□□ -0.23
CMTM1-215ENST00000531885 BMP1P13497 986 aa13.61□□□□□ -0.23
CMTM1-215ENST00000531885 POU3F3P20264 500 aaPredicted RBP13.61□□□□□ -0.23
CMTM1-215ENST00000531885 PTGS1P23219 599 aa13.61□□□□□ -0.23
CMTM1-215ENST00000531885 CHMP4BP1P59074 171 aa13.61□□□□□ -0.23
CMTM1-215ENST00000531885 CTDSPL2Q05D32 466 aa13.61□□□□□ -0.23
CMTM1-215ENST00000531885 NBPF20Q3BBV1 942 aa13.61□□□□□ -0.23
CMTM1-215ENST00000531885 ZMYM1Q5SVZ6 1142 aa13.61□□□□□ -0.23
CMTM1-215ENST00000531885 RNF207Q6ZRF8 634 aa13.61□□□□□ -0.23
CMTM1-215ENST00000531885 NECAB3Q96P71 396 aaPredicted RBP13.61□□□□□ -0.23
CMTM1-215ENST00000531885 CERS4Q9HA82 394 aa13.61□□□□□ -0.23
CMTM1-215ENST00000531885 RAPGEFL1Q9UHV5 662 aa13.61□□□□□ -0.23
CMTM1-215ENST00000531885 MTCH2Q9Y6C9 303 aa13.61□□□□□ -0.23
CMTM1-215ENST00000531885 DDX49Q9Y6V7 483 aaKnown RBP13.61□□□□□ -0.23
CMTM1-215ENST00000531885 PRRC2BQ5JSZ5 2229 aaKnown RBP13.61□□□□□ -0.23
CMTM1-215ENST00000531885 RBM47A0AV96 593 aaKnown RBP13.6□□□□□ -0.23
CMTM1-215ENST00000531885 NFIBO00712 420 aa13.6□□□□□ -0.23
CMTM1-215ENST00000531885 TLL1O43897 1013 aa13.6□□□□□ -0.23
CMTM1-215ENST00000531885 IQCF3P0C7M6 154 aa13.6□□□□□ -0.23
CMTM1-215ENST00000531885 TOP1P11387 765 aaKnown RBP13.6□□□□□ -0.23
CMTM1-215ENST00000531885 SLC16A2P36021 539 aa13.6□□□□□ -0.23
CMTM1-215ENST00000531885 RRP12Q5JTH9 1297 aaKnown RBP13.6□□□□□ -0.23
CMTM1-215ENST00000531885 HERC6Q8IVU3 1022 aa13.6□□□□□ -0.23
CMTM1-215ENST00000531885 MIER1Q8N108 512 aa13.6□□□□□ -0.23
CMTM1-215ENST00000531885 DNERQ8NFT8 737 aa13.6□□□□□ -0.23
CMTM1-215ENST00000531885 CAGE1Q8TC20 777 aa13.6□□□□□ -0.23
CMTM1-215ENST00000531885 HLA-CQ95604 372 aa13.6□□□□□ -0.23
CMTM1-215ENST00000531885 ZBED2Q9BTP6 218 aa13.6□□□□□ -0.23
CMTM1-215ENST00000531885 IL17RBQ9NRM6 502 aa13.6□□□□□ -0.23
CMTM1-215ENST00000531885 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.6□□□□□ -0.23
CMTM1-215ENST00000531885 NMT2O60551 498 aa13.59□□□□□ -0.23
CMTM1-215ENST00000531885 PARNO95453 639 aaKnown RBP13.59□□□□□ -0.23
CMTM1-215ENST00000531885 TXNP10599 105 aaKnown RBP13.59□□□□□ -0.23
CMTM1-215ENST00000531885 KCNQ1P51787 676 aa13.59□□□□□ -0.23
CMTM1-215ENST00000531885 TMEM63BQ5T3F8 832 aa13.59□□□□□ -0.23
CMTM1-215ENST00000531885 BTNL9Q6UXG8 535 aa13.59□□□□□ -0.23
CMTM1-215ENST00000531885 AFAP1L1Q8TED9 768 aa13.59□□□□□ -0.23
CMTM1-215ENST00000531885 PURBQ96QR8 312 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms