RNA–Protein interactions for RNA: ENST00000531653.5

PSMC3-211, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 2

Gene PSMC3, Length 498 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-211ENST00000531653 NFRKBQ6P4R8 1299 aa13.51□□□□□ -0.25
PSMC3-211ENST00000531653 MRPL38Q96DV4 380 aaKnown RBP13.51□□□□□ -0.25
PSMC3-211ENST00000531653 UPF3BQ9BZI7 483 aaKnown RBP13.51□□□□□ -0.25
PSMC3-211ENST00000531653 FTOQ9C0B1 505 aaKnown RBP eCLIP13.51□□□□□ -0.25
PSMC3-211ENST00000531653 RBM47A0AV96 593 aaKnown RBP13.5□□□□□ -0.25
PSMC3-211ENST00000531653 USP17L12C9JPN9 530 aa13.5□□□□□ -0.25
PSMC3-211ENST00000531653 USP17L21D6R901 530 aa13.5□□□□□ -0.25
PSMC3-211ENST00000531653 PRKAB2O43741 272 aa13.5□□□□□ -0.25
PSMC3-211ENST00000531653 ATP8B2P98198 1209 aa13.5□□□□□ -0.25
PSMC3-211ENST00000531653 PKN1Q16512 942 aa13.5□□□□□ -0.25
PSMC3-211ENST00000531653 TCTN1Q2MV58 587 aa13.5□□□□□ -0.25
PSMC3-211ENST00000531653 NBPF20Q3BBV1 942 aa13.5□□□□□ -0.25
PSMC3-211ENST00000531653 FBXO16Q8IX29 292 aaPredicted RBP13.5□□□□□ -0.25
PSMC3-211ENST00000531653 EDAQ92838 391 aa13.5□□□□□ -0.25
PSMC3-211ENST00000531653 ACAD9Q9H845 621 aa13.5□□□□□ -0.25
PSMC3-211ENST00000531653 VTA1Q9NP79 307 aa13.5□□□□□ -0.25
PSMC3-211ENST00000531653 FAM50BQ9Y247 325 aa13.5□□□□□ -0.25
PSMC3-211ENST00000531653 DDX49Q9Y6V7 483 aaKnown RBP13.5□□□□□ -0.25
PSMC3-211ENST00000531653 CACNA1BQ00975 2339 aa13.49□□□□□ -0.25
PSMC3-211ENST00000531653 IGKV6D-41A0A0C4DH26 115 aa13.49□□□□□ -0.25
PSMC3-211ENST00000531653 GFRA3O60609 400 aa13.49□□□□□ -0.25
PSMC3-211ENST00000531653 FDX1P10109 184 aa13.49□□□□□ -0.25
PSMC3-211ENST00000531653 LTBRP36941 435 aa13.49□□□□□ -0.25
PSMC3-211ENST00000531653 RARSP54136 660 aaKnown RBP13.49□□□□□ -0.25
PSMC3-211ENST00000531653 MKRN4PQ13434 485 aaPredicted RBP13.49□□□□□ -0.25
PSMC3-211ENST00000531653 BFSP2Q13515 415 aa13.49□□□□□ -0.25
PSMC3-211ENST00000531653 TTF1Q15361 905 aaPredicted RBP13.49□□□□□ -0.25
PSMC3-211ENST00000531653 SMAD2Q15796 467 aaKnown RBP13.49□□□□□ -0.25
PSMC3-211ENST00000531653 CNKSR3Q6P9H4 555 aa13.49□□□□□ -0.25
PSMC3-211ENST00000531653 RETREG2Q8NC44 543 aa13.49□□□□□ -0.25
PSMC3-211ENST00000531653 SP7Q8TDD2 431 aaPredicted RBP13.49□□□□□ -0.25
PSMC3-211ENST00000531653 AFAP1L1Q8TED9 768 aa13.49□□□□□ -0.25
PSMC3-211ENST00000531653 MKL1Q969V6 931 aa13.49□□□□□ -0.25
PSMC3-211ENST00000531653 MTG1Q9BT17 334 aaPredicted RBP13.49□□□□□ -0.25
PSMC3-211ENST00000531653 ARMT1Q9H993 441 aa13.49□□□□□ -0.25
PSMC3-211ENST00000531653 MUTYHQ9UIF7 546 aa13.49□□□□□ -0.25
PSMC3-211ENST00000531653 FEM1BQ9UK73 627 aa13.49□□□□□ -0.25
PSMC3-211ENST00000531653 MTUS1Q9ULD2 1270 aa13.49□□□□□ -0.25
PSMC3-211ENST00000531653 SYNPO2Q9UMS6 1093 aa13.49□□□□□ -0.25
PSMC3-211ENST00000531653 GVINP1Q7Z2Y8 2422 aa13.49□□□□□ -0.25
PSMC3-211ENST00000531653 NLRC5Q86WI3 1866 aa13.48□□□□□ -0.25
PSMC3-211ENST00000531653 ABHD14A-ACY1A0A1B0GW23 586 aa13.48□□□□□ -0.25
PSMC3-211ENST00000531653 SURF6O75683 361 aaKnown RBP13.48□□□□□ -0.25
PSMC3-211ENST00000531653 CTC1Q2NKJ3 1217 aa13.48□□□□□ -0.25
PSMC3-211ENST00000531653 TIGD5Q53EQ6 642 aa13.48□□□□□ -0.25
PSMC3-211ENST00000531653 RPAP2Q8IXW5 612 aaPredicted RBP13.48□□□□□ -0.25
PSMC3-211ENST00000531653 CAGE1Q8TC20 777 aa13.48□□□□□ -0.25
PSMC3-211ENST00000531653 KIFC2Q96AC6 838 aa13.48□□□□□ -0.25
PSMC3-211ENST00000531653 C17orf80Q9BSJ5 609 aa13.48□□□□□ -0.25
PSMC3-211ENST00000531653 CTNNA3Q9UI47 895 aa13.48□□□□□ -0.25
PSMC3-211ENST00000531653 MYH7P12883 1935 aa13.47□□□□□ -0.25
PSMC3-211ENST00000531653 RALGAPA2Q2PPJ7 1873 aa13.47□□□□□ -0.25
PSMC3-211ENST00000531653 PROB1E7EW31 1015 aa13.47□□□□□ -0.25
PSMC3-211ENST00000531653 PARNO95453 639 aaKnown RBP13.47□□□□□ -0.25
PSMC3-211ENST00000531653 TRIM27P14373 513 aa13.47□□□□□ -0.25
PSMC3-211ENST00000531653 SLC4A3P48751 1232 aa13.47□□□□□ -0.25
PSMC3-211ENST00000531653 CPT1AP50416 773 aa13.47□□□□□ -0.25
PSMC3-211ENST00000531653 HTRA4P83105 476 aaPredicted RBP13.47□□□□□ -0.25
PSMC3-211ENST00000531653 OS9Q13438 667 aaPredicted RBP13.47□□□□□ -0.25
PSMC3-211ENST00000531653 TKFCQ3LXA3 575 aa13.47□□□□□ -0.25
PSMC3-211ENST00000531653 KIAA1211Q6ZU35 1233 aa13.47□□□□□ -0.25
PSMC3-211ENST00000531653 ERMP1Q7Z2K6 904 aa13.47□□□□□ -0.25
PSMC3-211ENST00000531653 RNF135Q8IUD6 432 aa13.47□□□□□ -0.25
PSMC3-211ENST00000531653 FBXO22Q8NEZ5 403 aa13.47□□□□□ -0.25
PSMC3-211ENST00000531653 ZBED2Q9BTP6 218 aa13.47□□□□□ -0.25
PSMC3-211ENST00000531653 CYP39A1Q9NYL5 469 aa13.47□□□□□ -0.25
PSMC3-211ENST00000531653 COG6Q9Y2V7 657 aa13.47□□□□□ -0.25
PSMC3-211ENST00000531653 LOC102724159A0A0B4J2E5 919 aa13.46□□□□□ -0.25
PSMC3-211ENST00000531653 A6NJR5 290 aa13.46□□□□□ -0.25
PSMC3-211ENST00000531653 RAD21O60216 631 aa13.46□□□□□ -0.25
PSMC3-211ENST00000531653 NBNO60934 754 aa13.46□□□□□ -0.25
PSMC3-211ENST00000531653 EFCAB14O75071 495 aa13.46□□□□□ -0.25
PSMC3-211ENST00000531653 RASA1P20936 1047 aa13.46□□□□□ -0.25
PSMC3-211ENST00000531653 PWP2Q15269 919 aaKnown RBP13.46□□□□□ -0.25
PSMC3-211ENST00000531653 TCEAL5Q5H9L2 206 aa13.46□□□□□ -0.25
PSMC3-211ENST00000531653 CTR9Q6PD62 1173 aa13.46□□□□□ -0.25
PSMC3-211ENST00000531653 TRAF7Q6Q0C0 670 aa13.46□□□□□ -0.25
PSMC3-211ENST00000531653 TRIM67Q6ZTA4 783 aa13.46□□□□□ -0.25
PSMC3-211ENST00000531653 EEPD1Q7L9B9 569 aa13.46□□□□□ -0.25
PSMC3-211ENST00000531653 SESTD1Q86VW0 696 aa13.46□□□□□ -0.25
PSMC3-211ENST00000531653 BANK1Q8NDB2 785 aa13.46□□□□□ -0.25
PSMC3-211ENST00000531653 DHX38Q92620 1227 aaKnown RBP13.46□□□□□ -0.25
PSMC3-211ENST00000531653 HOMER2Q9NSB8 354 aa13.46□□□□□ -0.25
PSMC3-211ENST00000531653 RNF146Q9NTX7 359 aa13.46□□□□□ -0.25
PSMC3-211ENST00000531653 TNNQ9UQP3 1299 aa13.46□□□□□ -0.25
PSMC3-211ENST00000531653 TMEM221A6NGB7 291 aa13.45□□□□□ -0.26
PSMC3-211ENST00000531653 H3BNC9 293 aa13.45□□□□□ -0.26
PSMC3-211ENST00000531653 M0R296 226 aa13.45□□□□□ -0.26
PSMC3-211ENST00000531653 BCAR3O75815 825 aa13.45□□□□□ -0.26
PSMC3-211ENST00000531653 MBD4O95243 580 aa13.45□□□□□ -0.26
PSMC3-211ENST00000531653 MYL3P08590 195 aa13.45□□□□□ -0.26
PSMC3-211ENST00000531653 SELPP16109 830 aa13.45□□□□□ -0.26
PSMC3-211ENST00000531653 ADD2P35612 726 aa13.45□□□□□ -0.26
PSMC3-211ENST00000531653 PTPROQ16827 1216 aa13.45□□□□□ -0.26
PSMC3-211ENST00000531653 FAM47CQ5HY64 1035 aa13.45□□□□□ -0.26
PSMC3-211ENST00000531653 GMCL1P1Q8NEA9 526 aa13.45□□□□□ -0.26
PSMC3-211ENST00000531653 SAMD11Q96NU1 681 aa13.45□□□□□ -0.26
PSMC3-211ENST00000531653 POP1Q99575 1024 aaKnown RBP13.45□□□□□ -0.26
PSMC3-211ENST00000531653 WDR11Q9BZH6 1224 aa13.45□□□□□ -0.26
PSMC3-211ENST00000531653 INSL6Q9Y581 213 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms