RNA–Protein interactions for RNA: ENST00000530563.1

TM9SF1-210, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-210ENST00000530563 RBM47A0AV96 593 aaKnown RBP12.72□□□□□ -0.37
TM9SF1-210ENST00000530563 CCER2I3L3R5 266 aa12.72□□□□□ -0.37
TM9SF1-210ENST00000530563 IQCF3P0C7M6 154 aa12.72□□□□□ -0.37
TM9SF1-210ENST00000530563 SNAP25P60880 206 aa12.72□□□□□ -0.37
TM9SF1-210ENST00000530563 ZSCAN25Q6NSZ9 544 aa12.72□□□□□ -0.37
TM9SF1-210ENST00000530563 KIAA1211Q6ZU35 1233 aa12.72□□□□□ -0.37
TM9SF1-210ENST00000530563 TET1Q8NFU7 2136 aa12.72□□□□□ -0.37
TM9SF1-210ENST00000530563 SCN10AQ9Y5Y9 1956 aa12.71□□□□□ -0.37
TM9SF1-210ENST00000530563 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.71□□□□□ -0.37
TM9SF1-210ENST00000530563 LCHNA4D1U4 455 aa12.71□□□□□ -0.37
TM9SF1-210ENST00000530563 PITPNM1O00562 1244 aa12.71□□□□□ -0.37
TM9SF1-210ENST00000530563 ALAS1P13196 640 aa12.71□□□□□ -0.37
TM9SF1-210ENST00000530563 RFC2P35250 354 aa12.71□□□□□ -0.37
TM9SF1-210ENST00000530563 STAT2P52630 851 aa12.71□□□□□ -0.37
TM9SF1-210ENST00000530563 NBPF20Q3BBV1 942 aa12.71□□□□□ -0.37
TM9SF1-210ENST00000530563 ZNF444Q8N0Y2 327 aaPredicted RBP12.71□□□□□ -0.37
TM9SF1-210ENST00000530563 PPP1R13LQ8WUF5 828 aa12.71□□□□□ -0.37
TM9SF1-210ENST00000530563 CHURC1Q8WUH1 139 aa12.71□□□□□ -0.37
TM9SF1-210ENST00000530563 CTAGE1Q96RT6 745 aa12.71□□□□□ -0.37
TM9SF1-210ENST00000530563 BCL11AQ9H165 835 aa12.71□□□□□ -0.37
TM9SF1-210ENST00000530563 ZBTB40Q9NUA8 1239 aa12.71□□□□□ -0.37
TM9SF1-210ENST00000530563 POLR3EQ9NVU0 708 aa12.71□□□□□ -0.37
TM9SF1-210ENST00000530563 PTPRSQ13332 1948 aa12.7□□□□□ -0.38
TM9SF1-210ENST00000530563 RBAK-RBAKDNI3L0D1 243 aa12.7□□□□□ -0.38
TM9SF1-210ENST00000530563 ACTN1P12814 892 aa12.7□□□□□ -0.38
TM9SF1-210ENST00000530563 MCCP23508 829 aa12.7□□□□□ -0.38
TM9SF1-210ENST00000530563 RASGRP2Q7LDG7 609 aa12.7□□□□□ -0.38
TM9SF1-210ENST00000530563 ALYREFQ86V81 257 aaKnown RBP12.7□□□□□ -0.38
TM9SF1-210ENST00000530563 FAM160B2Q86V87 743 aa12.7□□□□□ -0.38
TM9SF1-210ENST00000530563 WDR11Q9BZH6 1224 aa12.7□□□□□ -0.38
TM9SF1-210ENST00000530563 LMCD1Q9NZU5 365 aa12.7□□□□□ -0.38
TM9SF1-210ENST00000530563 PRR12Q9ULL5 1215 aa12.7□□□□□ -0.38
TM9SF1-210ENST00000530563 CFAP54Q96N23 3096 aa12.69□□□□□ -0.38
TM9SF1-210ENST00000530563 A6NJR5 290 aa12.69□□□□□ -0.38
TM9SF1-210ENST00000530563 TFAP4Q01664 338 aa12.69□□□□□ -0.38
TM9SF1-210ENST00000530563 TCTN1Q2MV58 587 aa12.69□□□□□ -0.38
TM9SF1-210ENST00000530563 RCSD1Q6JBY9 416 aa12.69□□□□□ -0.38
TM9SF1-210ENST00000530563 NFRKBQ6P4R8 1299 aa12.69□□□□□ -0.38
TM9SF1-210ENST00000530563 KCTD1Q719H9 257 aa12.69□□□□□ -0.38
TM9SF1-210ENST00000530563 TMCO2Q7Z6W1 182 aaPredicted RBP12.69□□□□□ -0.38
TM9SF1-210ENST00000530563 FAM178BQ8IXR5 827 aa12.69□□□□□ -0.38
TM9SF1-210ENST00000530563 APPBP2Q92624 585 aa12.69□□□□□ -0.38
TM9SF1-210ENST00000530563 CHMP4CQ96CF2 233 aa12.69□□□□□ -0.38
TM9SF1-210ENST00000530563 MTG1Q9BT17 334 aaPredicted RBP12.69□□□□□ -0.38
TM9SF1-210ENST00000530563 COL4A4P53420 1690 aaPredicted RBP12.68□□□□□ -0.38
TM9SF1-210ENST00000530563 PRR33A8MZF0 331 aa12.68□□□□□ -0.38
TM9SF1-210ENST00000530563 M0R2C6 588 aa12.68□□□□□ -0.38
TM9SF1-210ENST00000530563 GPAA1O43292 621 aa12.68□□□□□ -0.38
TM9SF1-210ENST00000530563 BAIAP3O94812 1187 aa12.68□□□□□ -0.38
TM9SF1-210ENST00000530563 MYL3P08590 195 aa12.68□□□□□ -0.38
TM9SF1-210ENST00000530563 SLC1A4P43007 532 aa12.68□□□□□ -0.38
TM9SF1-210ENST00000530563 NOVP48745 357 aa12.68□□□□□ -0.38
TM9SF1-210ENST00000530563 CPT1AP50416 773 aa12.68□□□□□ -0.38
TM9SF1-210ENST00000530563 ALDH5A1P51649 535 aaPredicted RBP12.68□□□□□ -0.38
TM9SF1-210ENST00000530563 BAATQ14032 418 aaPredicted RBP12.68□□□□□ -0.38
TM9SF1-210ENST00000530563 NSMFQ6X4W1 530 aa12.68□□□□□ -0.38
TM9SF1-210ENST00000530563 IFNL3Q8IZI9 196 aa12.68□□□□□ -0.38
TM9SF1-210ENST00000530563 KBTBD3Q8NAB2 608 aa12.68□□□□□ -0.38
TM9SF1-210ENST00000530563 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.68□□□□□ -0.38
TM9SF1-210ENST00000530563 GDPD5Q8WTR4 605 aa12.68□□□□□ -0.38
TM9SF1-210ENST00000530563 ZNF287Q9HBT7 754 aa12.68□□□□□ -0.38
TM9SF1-210ENST00000530563 IL17RBQ9NRM6 502 aa12.68□□□□□ -0.38
TM9SF1-210ENST00000530563 LOC102724159A0A0B4J2E5 919 aa12.67□□□□□ -0.38
TM9SF1-210ENST00000530563 KIF28PB7ZC32 967 aa12.67□□□□□ -0.38
TM9SF1-210ENST00000530563 PATL2C9JE40 543 aaKnown RBP12.67□□□□□ -0.38
TM9SF1-210ENST00000530563 NFIBO00712 420 aa12.67□□□□□ -0.38
TM9SF1-210ENST00000530563 RNF113AO15541 343 aaKnown RBP12.67□□□□□ -0.38
TM9SF1-210ENST00000530563 SMARCA5O60264 1052 aaPredicted RBP12.67□□□□□ -0.38
TM9SF1-210ENST00000530563 HMMRO75330 724 aa12.67□□□□□ -0.38
TM9SF1-210ENST00000530563 ICAM1P05362 532 aa12.67□□□□□ -0.38
TM9SF1-210ENST00000530563 TSPY3P0CV98 308 aa12.67□□□□□ -0.38
TM9SF1-210ENST00000530563 TSPY8P0CW00 308 aa12.67□□□□□ -0.38
TM9SF1-210ENST00000530563 WDR5P61964 334 aaKnown RBP12.67□□□□□ -0.38
TM9SF1-210ENST00000530563 PTPN11Q06124 597 aaPredicted RBP12.67□□□□□ -0.38
TM9SF1-210ENST00000530563 PWP2Q15269 919 aaKnown RBP12.67□□□□□ -0.38
TM9SF1-210ENST00000530563 LEXMQ3ZCV2 418 aa12.67□□□□□ -0.38
TM9SF1-210ENST00000530563 COPS5Q92905 334 aa12.67□□□□□ -0.38
TM9SF1-210ENST00000530563 FTOQ9C0B1 505 aaKnown RBP eCLIP12.67□□□□□ -0.38
TM9SF1-210ENST00000530563 RANBP17Q9H2T7 1088 aaKnown RBP12.67□□□□□ -0.38
TM9SF1-210ENST00000530563 UBE2ZQ9H832 354 aaPredicted RBP12.67□□□□□ -0.38
TM9SF1-210ENST00000530563 SUGCTQ9HAC7 445 aa12.67□□□□□ -0.38
TM9SF1-210ENST00000530563 TANC1Q9C0D5 1861 aa12.67□□□□□ -0.38
TM9SF1-210ENST00000530563 FOXP2O15409 715 aa12.66□□□□□ -0.38
TM9SF1-210ENST00000530563 NMT2O60551 498 aa12.66□□□□□ -0.38
TM9SF1-210ENST00000530563 GNAT2P19087 354 aa12.66□□□□□ -0.38
TM9SF1-210ENST00000530563 EDNRBP24530 442 aa12.66□□□□□ -0.38
TM9SF1-210ENST00000530563 TDO2P48775 406 aa12.66□□□□□ -0.38
TM9SF1-210ENST00000530563 ERVK-21P61565 698 aa12.66□□□□□ -0.38
TM9SF1-210ENST00000530563 DEFB103AP81534 67 aa12.66□□□□□ -0.38
TM9SF1-210ENST00000530563 FAM47CQ5HY64 1035 aa12.66□□□□□ -0.38
TM9SF1-210ENST00000530563 BTNL9Q6UXG8 535 aa12.66□□□□□ -0.38
TM9SF1-210ENST00000530563 GJD3Q8N144 294 aa12.66□□□□□ -0.38
TM9SF1-210ENST00000530563 RETREG2Q8NC44 543 aa12.66□□□□□ -0.38
TM9SF1-210ENST00000530563 CLEC4DQ8WXI8 215 aa12.66□□□□□ -0.38
TM9SF1-210ENST00000530563 DHX38Q92620 1227 aaKnown RBP12.66□□□□□ -0.38
TM9SF1-210ENST00000530563 INCENPQ9NQS7 918 aa12.66□□□□□ -0.38
TM9SF1-210ENST00000530563 ECHDC1Q9NTX5 307 aa12.66□□□□□ -0.38
TM9SF1-210ENST00000530563 CCPG1Q9ULG6 757 aa12.66□□□□□ -0.38
TM9SF1-210ENST00000530563 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.66□□□□□ -0.38
TM9SF1-210ENST00000530563 WDR87Q6ZQQ6 2873 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms