RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 M0R2N6 131 aa13.95□□□□□ -0.18
TRAF3IP2-211ENST00000528599 CFBP00751 764 aa13.95□□□□□ -0.18
TRAF3IP2-211ENST00000528599 GNA11P29992 359 aa13.95□□□□□ -0.18
TRAF3IP2-211ENST00000528599 HOXA13P31271 388 aaPredicted RBP13.95□□□□□ -0.18
TRAF3IP2-211ENST00000528599 MRPL12P52815 198 aaKnown RBP13.95□□□□□ -0.18
TRAF3IP2-211ENST00000528599 NR5A1Q13285 461 aa13.95□□□□□ -0.18
TRAF3IP2-211ENST00000528599 GALNT17Q6IS24 598 aa13.95□□□□□ -0.18
TRAF3IP2-211ENST00000528599 DIS3L2Q8IYB7 885 aaKnown RBP13.95□□□□□ -0.18
TRAF3IP2-211ENST00000528599 RASGRP4Q8TDF6 673 aa13.95□□□□□ -0.18
TRAF3IP2-211ENST00000528599 ARHGAP39Q9C0H5 1083 aa13.95□□□□□ -0.18
TRAF3IP2-211ENST00000528599 MROH8Q9H579 483 aa13.95□□□□□ -0.18
TRAF3IP2-211ENST00000528599 TMEM260Q9NX78 707 aa13.95□□□□□ -0.18
TRAF3IP2-211ENST00000528599 KIF28PB7ZC32 967 aa13.94□□□□□ -0.18
TRAF3IP2-211ENST00000528599 ECM2O94769 699 aaPredicted RBP13.94□□□□□ -0.18
TRAF3IP2-211ENST00000528599 COPB2P35606 906 aa13.94□□□□□ -0.18
TRAF3IP2-211ENST00000528599 KRT2P35908 639 aa13.94□□□□□ -0.18
TRAF3IP2-211ENST00000528599 CLK2P49760 499 aaKnown RBP13.94□□□□□ -0.18
TRAF3IP2-211ENST00000528599 HSD17B4P51659 736 aa13.94□□□□□ -0.18
TRAF3IP2-211ENST00000528599 GHRHRQ02643 423 aa13.94□□□□□ -0.18
TRAF3IP2-211ENST00000528599 NSMFQ6X4W1 530 aa13.94□□□□□ -0.18
TRAF3IP2-211ENST00000528599 MCF2L2Q86YR7 1114 aa13.94□□□□□ -0.18
TRAF3IP2-211ENST00000528599 TNFRSF25Q93038 417 aa13.94□□□□□ -0.18
TRAF3IP2-211ENST00000528599 A1CFQ9NQ94 594 aaKnown RBP13.94□□□□□ -0.18
TRAF3IP2-211ENST00000528599 BIN2Q9UBW5 565 aaPredicted RBP13.94□□□□□ -0.18
TRAF3IP2-211ENST00000528599 FBXO40Q9UH90 709 aa13.94□□□□□ -0.18
TRAF3IP2-211ENST00000528599 PCDHA6Q9UN73 950 aa13.94□□□□□ -0.18
TRAF3IP2-211ENST00000528599 PCDHA8Q9Y5H6 950 aa13.94□□□□□ -0.18
TRAF3IP2-211ENST00000528599 GCOM1H8Y6P7 765 aaPredicted RBP13.93□□□□□ -0.18
TRAF3IP2-211ENST00000528599 PIK3CDO00329 1044 aa13.93□□□□□ -0.18
TRAF3IP2-211ENST00000528599 FKTNO75072 461 aa13.93□□□□□ -0.18
TRAF3IP2-211ENST00000528599 BRD1O95696 1058 aa13.93□□□□□ -0.18
TRAF3IP2-211ENST00000528599 POLR2MP0CAP2 368 aa13.93□□□□□ -0.18
TRAF3IP2-211ENST00000528599 ZSCAN22P10073 491 aaPredicted RBP13.93□□□□□ -0.18
TRAF3IP2-211ENST00000528599 RPS6P62753 249 aaKnown RBP13.93□□□□□ -0.18
TRAF3IP2-211ENST00000528599 SP3Q02447 781 aa13.93□□□□□ -0.18
TRAF3IP2-211ENST00000528599 BAATQ14032 418 aaPredicted RBP13.93□□□□□ -0.18
TRAF3IP2-211ENST00000528599 SAFBQ15424 915 aaKnown RBP eCLIP13.93□□□□□ -0.18
TRAF3IP2-211ENST00000528599 WDR78Q5VTH9 848 aa13.93□□□□□ -0.18
TRAF3IP2-211ENST00000528599 FOXD4L5Q5VV16 416 aaPredicted RBP13.93□□□□□ -0.18
TRAF3IP2-211ENST00000528599 JAKMIP3Q5VZ66 844 aa13.93□□□□□ -0.18
TRAF3IP2-211ENST00000528599 MCTP1Q6DN14 999 aa13.93□□□□□ -0.18
TRAF3IP2-211ENST00000528599 SLC30A10Q6XR72 485 aa13.93□□□□□ -0.18
TRAF3IP2-211ENST00000528599 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.93□□□□□ -0.18
TRAF3IP2-211ENST00000528599 FERMT3Q86UX7 667 aa13.93□□□□□ -0.18
TRAF3IP2-211ENST00000528599 REXO1Q8N1G1 1221 aaKnown RBP13.93□□□□□ -0.18
TRAF3IP2-211ENST00000528599 CD99L2Q8TCZ2 262 aa13.93□□□□□ -0.18
TRAF3IP2-211ENST00000528599 BICD2Q8TD16 824 aa13.93□□□□□ -0.18
TRAF3IP2-211ENST00000528599 FOXD4L4Q8WXT5 416 aaPredicted RBP13.93□□□□□ -0.18
TRAF3IP2-211ENST00000528599 GLT8D2Q9H1C3 349 aa13.93□□□□□ -0.18
TRAF3IP2-211ENST00000528599 COL20A1Q9P218 1284 aa13.93□□□□□ -0.18
TRAF3IP2-211ENST00000528599 PDIA4P13667 645 aaKnown RBP13.92□□□□□ -0.18
TRAF3IP2-211ENST00000528599 U2AF2P26368 475 aaKnown RBP eCLIP13.92□□□□□ -0.18
TRAF3IP2-211ENST00000528599 EARS2Q5JPH6 523 aaKnown RBP13.92□□□□□ -0.18
TRAF3IP2-211ENST00000528599 RNF207Q6ZRF8 634 aa13.92□□□□□ -0.18
TRAF3IP2-211ENST00000528599 CCAR1Q8IX12 1150 aaKnown RBP13.92□□□□□ -0.18
TRAF3IP2-211ENST00000528599 SYTL5Q8TDW5 730 aaPredicted RBP13.92□□□□□ -0.18
TRAF3IP2-211ENST00000528599 PURBQ96QR8 312 aaKnown RBP13.92□□□□□ -0.18
TRAF3IP2-211ENST00000528599 FOXP1Q9H334 677 aaPredicted RBP13.92□□□□□ -0.18
TRAF3IP2-211ENST00000528599 BRMS1Q9HCU9 246 aa13.92□□□□□ -0.18
TRAF3IP2-211ENST00000528599 CYP39A1Q9NYL5 469 aa13.92□□□□□ -0.18
TRAF3IP2-211ENST00000528599 CIZ1Q9ULV3 898 aaPredicted RBP13.92□□□□□ -0.18
TRAF3IP2-211ENST00000528599 RBBP6Q7Z6E9 1792 aaKnown RBP13.92□□□□□ -0.18
TRAF3IP2-211ENST00000528599 FAM205CA6NFA0 338 aa13.91□□□□□ -0.18
TRAF3IP2-211ENST00000528599 MAPK4P31152 587 aa13.91□□□□□ -0.18
TRAF3IP2-211ENST00000528599 LACTBP83111 547 aaPredicted RBP13.91□□□□□ -0.18
TRAF3IP2-211ENST00000528599 RESTQ13127 1097 aa13.91□□□□□ -0.18
TRAF3IP2-211ENST00000528599 GPR142Q7Z601 462 aa13.91□□□□□ -0.18
TRAF3IP2-211ENST00000528599 FCHSD1Q86WN1 690 aa13.91□□□□□ -0.18
TRAF3IP2-211ENST00000528599 ANKRD35Q8N283 1001 aa13.91□□□□□ -0.18
TRAF3IP2-211ENST00000528599 PGBD1Q96JS3 809 aa13.91□□□□□ -0.18
TRAF3IP2-211ENST00000528599 MMP19Q99542 508 aa13.91□□□□□ -0.18
TRAF3IP2-211ENST00000528599 MGAMO43451 1857 aa13.91□□□□□ -0.18
TRAF3IP2-211ENST00000528599 FCER1AP12319 257 aa13.91□□□□□ -0.18
TRAF3IP2-211ENST00000528599 NUCB2P80303 420 aa13.91□□□□□ -0.18
TRAF3IP2-211ENST00000528599 PLEKHH3Q7Z736 793 aa13.91□□□□□ -0.18
TRAF3IP2-211ENST00000528599 NOSTRINQ8IVI9 506 aa13.91□□□□□ -0.18
TRAF3IP2-211ENST00000528599 TEX2Q8IWB9 1127 aa13.91□□□□□ -0.18
TRAF3IP2-211ENST00000528599 SAMD3Q8N6K7 520 aa13.91□□□□□ -0.18
TRAF3IP2-211ENST00000528599 MAF1Q9H063 256 aa13.91□□□□□ -0.18
TRAF3IP2-211ENST00000528599 MAP3K20Q9NYL2 800 aaKnown RBP13.91□□□□□ -0.18
TRAF3IP2-211ENST00000528599 CHMP5Q9NZZ3 219 aa13.91□□□□□ -0.18
TRAF3IP2-211ENST00000528599 PFASO15067 1338 aa13.9□□□□□ -0.18
TRAF3IP2-211ENST00000528599 DNAJC25-GNG10A0A024R161 153 aa13.9□□□□□ -0.18
TRAF3IP2-211ENST00000528599 STRNO43815 780 aa13.9□□□□□ -0.18
TRAF3IP2-211ENST00000528599 F13A1P00488 732 aa13.9□□□□□ -0.18
TRAF3IP2-211ENST00000528599 PGK2P07205 417 aa13.9□□□□□ -0.18
TRAF3IP2-211ENST00000528599 PTPREP23469 700 aa13.9□□□□□ -0.18
TRAF3IP2-211ENST00000528599 CNTN2Q02246 1040 aa13.9□□□□□ -0.18
TRAF3IP2-211ENST00000528599 GNL2Q13823 731 aaKnown RBP13.9□□□□□ -0.18
TRAF3IP2-211ENST00000528599 KCTD2Q14681 263 aa13.9□□□□□ -0.18
TRAF3IP2-211ENST00000528599 PIK3AP1Q6ZUJ8 805 aa13.9□□□□□ -0.18
TRAF3IP2-211ENST00000528599 OTOP1Q7RTM1 612 aa13.9□□□□□ -0.18
TRAF3IP2-211ENST00000528599 TAAR1Q96RJ0 339 aa13.9□□□□□ -0.18
TRAF3IP2-211ENST00000528599 DOCK3Q8IZD9 2030 aa13.9□□□□□ -0.18
TRAF3IP2-211ENST00000528599 FOSP01100 380 aaPredicted RBP13.89□□□□□ -0.19
TRAF3IP2-211ENST00000528599 AP3B2Q13367 1082 aa13.89□□□□□ -0.19
TRAF3IP2-211ENST00000528599 FAM173BQ6P4H8 233 aa13.89□□□□□ -0.19
TRAF3IP2-211ENST00000528599 KRT25Q7Z3Z0 450 aa13.89□□□□□ -0.19
TRAF3IP2-211ENST00000528599 ABRAQ8N0Z2 381 aa13.89□□□□□ -0.19
TRAF3IP2-211ENST00000528599 FAM133AQ8N9E0 248 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms