RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 PDE4BQ07343 736 aa14.62□□□□□ -0.07
SRPRA-202ENST00000527817 IKQ13123 557 aaPredicted RBP14.62□□□□□ -0.07
SRPRA-202ENST00000527817 PWP2Q15269 919 aaKnown RBP14.62□□□□□ -0.07
SRPRA-202ENST00000527817 MUM1L1Q5H9M0 696 aa14.62□□□□□ -0.07
SRPRA-202ENST00000527817 PPP4R3BQ5MIZ7 849 aa14.62□□□□□ -0.07
SRPRA-202ENST00000527817 RCSD1Q6JBY9 416 aa14.62□□□□□ -0.07
SRPRA-202ENST00000527817 FBXO16Q8IX29 292 aaPredicted RBP14.62□□□□□ -0.07
SRPRA-202ENST00000527817 CERS4Q9HA82 394 aa14.62□□□□□ -0.07
SRPRA-202ENST00000527817 EPB41L4AQ9HCS5 686 aaPredicted RBP14.62□□□□□ -0.07
SRPRA-202ENST00000527817 BRWD1Q9NSI6 2320 aa14.62□□□□□ -0.07
SRPRA-202ENST00000527817 DDX19BQ9UMR2 479 aa14.62□□□□□ -0.07
SRPRA-202ENST00000527817 PLIN4Q96Q06 1357 aa14.61□□□□□ -0.07
SRPRA-202ENST00000527817 MUC6Q6W4X9 2439 aa14.61□□□□□ -0.07
SRPRA-202ENST00000527817 PITPNM1O00562 1244 aa14.61□□□□□ -0.07
SRPRA-202ENST00000527817 GPAA1O43292 621 aa14.61□□□□□ -0.07
SRPRA-202ENST00000527817 APPP05067 770 aa14.61□□□□□ -0.07
SRPRA-202ENST00000527817 ZFYP08048 801 aaPredicted RBP14.61□□□□□ -0.07
SRPRA-202ENST00000527817 MCCP23508 829 aa14.61□□□□□ -0.07
SRPRA-202ENST00000527817 CPT1AP50416 773 aa14.61□□□□□ -0.07
SRPRA-202ENST00000527817 TFAP4Q01664 338 aa14.61□□□□□ -0.07
SRPRA-202ENST00000527817 NBPF20Q3BBV1 942 aa14.61□□□□□ -0.07
SRPRA-202ENST00000527817 KRT40Q6A162 431 aa14.61□□□□□ -0.07
SRPRA-202ENST00000527817 HERC6Q8IVU3 1022 aa14.61□□□□□ -0.07
SRPRA-202ENST00000527817 IFNL3Q8IZI9 196 aa14.61□□□□□ -0.07
SRPRA-202ENST00000527817 ARNTL2Q8WYA1 636 aa14.61□□□□□ -0.07
SRPRA-202ENST00000527817 MTG1Q9BT17 334 aaPredicted RBP14.61□□□□□ -0.07
SRPRA-202ENST00000527817 WDR11Q9BZH6 1224 aa14.61□□□□□ -0.07
SRPRA-202ENST00000527817 LRRCC1Q9C099 1032 aa14.61□□□□□ -0.07
SRPRA-202ENST00000527817 LMCD1Q9NZU5 365 aa14.61□□□□□ -0.07
SRPRA-202ENST00000527817 ADD3Q9UEY8 706 aaKnown RBP14.61□□□□□ -0.07
SRPRA-202ENST00000527817 KPNA6O60684 536 aa14.6□□□□□ -0.07
SRPRA-202ENST00000527817 IQCF3P0C7M6 154 aa14.6□□□□□ -0.07
SRPRA-202ENST00000527817 PTPN11Q06124 597 aaPredicted RBP14.6□□□□□ -0.07
SRPRA-202ENST00000527817 NFRKBQ6P4R8 1299 aa14.6□□□□□ -0.07
SRPRA-202ENST00000527817 NSMFQ6X4W1 530 aa14.6□□□□□ -0.07
SRPRA-202ENST00000527817 RETREG2Q8NC44 543 aa14.6□□□□□ -0.07
SRPRA-202ENST00000527817 CHMP4BQ9H444 224 aaKnown RBP14.6□□□□□ -0.07
SRPRA-202ENST00000527817 GPHNQ9NQX3 736 aaPredicted RBP14.6□□□□□ -0.07
SRPRA-202ENST00000527817 ECHDC1Q9NTX5 307 aa14.6□□□□□ -0.07
SRPRA-202ENST00000527817 PRR12Q9ULL5 1215 aa14.6□□□□□ -0.07
SRPRA-202ENST00000527817 ISY1Q9ULR0 285 aaKnown RBP14.6□□□□□ -0.07
SRPRA-202ENST00000527817 SCN5AQ14524 2016 aa14.59□□□□□ -0.07
SRPRA-202ENST00000527817 TET1Q8NFU7 2136 aa14.59□□□□□ -0.07
SRPRA-202ENST00000527817 PI4K2BG5E9Z4 385 aa14.59□□□□□ -0.07
SRPRA-202ENST00000527817 LPXNO60711 386 aa14.59□□□□□ -0.07
SRPRA-202ENST00000527817 ARHGEF15O94989 841 aa14.59□□□□□ -0.07
SRPRA-202ENST00000527817 SLC3A2P08195 630 aaKnown RBP14.59□□□□□ -0.07
SRPRA-202ENST00000527817 MYL3P08590 195 aa14.59□□□□□ -0.07
SRPRA-202ENST00000527817 SNAP25P60880 206 aa14.59□□□□□ -0.07
SRPRA-202ENST00000527817 GRB10Q13322 594 aa14.59□□□□□ -0.07
SRPRA-202ENST00000527817 BFSP2Q13515 415 aa14.59□□□□□ -0.07
SRPRA-202ENST00000527817 BRDTQ58F21 947 aaPredicted RBP14.59□□□□□ -0.07
SRPRA-202ENST00000527817 KCTD1Q719H9 257 aa14.59□□□□□ -0.07
SRPRA-202ENST00000527817 PURBQ96QR8 312 aaKnown RBP14.59□□□□□ -0.07
SRPRA-202ENST00000527817 NACAP1Q9BZK3 213 aa14.59□□□□□ -0.07
SRPRA-202ENST00000527817 FTOQ9C0B1 505 aaKnown RBP eCLIP14.59□□□□□ -0.07
SRPRA-202ENST00000527817 C11orf16Q9NQ32 467 aa14.59□□□□□ -0.07
SRPRA-202ENST00000527817 CCPG1Q9ULG6 757 aa14.59□□□□□ -0.07
SRPRA-202ENST00000527817 SCN10AQ9Y5Y9 1956 aa14.58□□□□□ -0.07
SRPRA-202ENST00000527817 NKRFO15226 690 aaKnown RBP eCLIP14.58□□□□□ -0.08
SRPRA-202ENST00000527817 BAIAP3O94812 1187 aa14.58□□□□□ -0.08
SRPRA-202ENST00000527817 ICAM1P05362 532 aa14.58□□□□□ -0.08
SRPRA-202ENST00000527817 ALDH5A1P51649 535 aaPredicted RBP14.58□□□□□ -0.08
SRPRA-202ENST00000527817 BAATQ14032 418 aaPredicted RBP14.58□□□□□ -0.08
SRPRA-202ENST00000527817 KHSRPQ92945 711 aaKnown RBP eCLIP14.58□□□□□ -0.08
SRPRA-202ENST00000527817 A6NJR5 290 aa14.57□□□□□ -0.08
SRPRA-202ENST00000527817 M0R2C6 588 aa14.57□□□□□ -0.08
SRPRA-202ENST00000527817 SMARCA5O60264 1052 aaPredicted RBP14.57□□□□□ -0.08
SRPRA-202ENST00000527817 PPARAQ07869 468 aa14.57□□□□□ -0.08
SRPRA-202ENST00000527817 LRRFIP1Q32MZ4 808 aaKnown RBP14.57□□□□□ -0.08
SRPRA-202ENST00000527817 FAM47CQ5HY64 1035 aa14.57□□□□□ -0.08
SRPRA-202ENST00000527817 BTNL9Q6UXG8 535 aa14.57□□□□□ -0.08
SRPRA-202ENST00000527817 OR6J1Q8NGC5 347 aa14.57□□□□□ -0.08
SRPRA-202ENST00000527817 IL17RBQ9NRM6 502 aa14.57□□□□□ -0.08
SRPRA-202ENST00000527817 LRRC37A2A6NM11 1700 aa14.56□□□□□ -0.08
SRPRA-202ENST00000527817 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.56□□□□□ -0.08
SRPRA-202ENST00000527817 NOVP48745 357 aa14.56□□□□□ -0.08
SRPRA-202ENST00000527817 HNRNPUQ00839 825 aaKnown RBP eCLIP14.56□□□□□ -0.08
SRPRA-202ENST00000527817 CHMP4CQ96CF2 233 aa14.56□□□□□ -0.08
SRPRA-202ENST00000527817 RANBP17Q9H2T7 1088 aaKnown RBP14.56□□□□□ -0.08
SRPRA-202ENST00000527817 CD320Q9NPF0 282 aa14.56□□□□□ -0.08
SRPRA-202ENST00000527817 STX8Q9UNK0 236 aa14.56□□□□□ -0.08
SRPRA-202ENST00000527817 RAD50Q92878 1312 aa14.56□□□□□ -0.08
SRPRA-202ENST00000527817 TRIP12Q14669 1992 aaPredicted RBP14.56□□□□□ -0.08
SRPRA-202ENST00000527817 KCNJ6P48051 423 aa14.55□□□□□ -0.08
SRPRA-202ENST00000527817 CAGE1Q8TC20 777 aa14.55□□□□□ -0.08
SRPRA-202ENST00000527817 AFAP1L1Q8TED9 768 aa14.55□□□□□ -0.08
SRPRA-202ENST00000527817 SCFD2Q8WU76 684 aa14.55□□□□□ -0.08
SRPRA-202ENST00000527817 DCAF4Q8WV16 495 aa14.55□□□□□ -0.08
SRPRA-202ENST00000527817 NAPBQ9H115 298 aa14.55□□□□□ -0.08
SRPRA-202ENST00000527817 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.55□□□□□ -0.08
SRPRA-202ENST00000527817 LCTP09848 1927 aa14.54□□□□□ -0.08
SRPRA-202ENST00000527817 TSPY2A6NKD2 308 aa14.54□□□□□ -0.08
SRPRA-202ENST00000527817 NFIBO00712 420 aa14.54□□□□□ -0.08
SRPRA-202ENST00000527817 PARNO95453 639 aaKnown RBP14.54□□□□□ -0.08
SRPRA-202ENST00000527817 EDNRBP24530 442 aa14.54□□□□□ -0.08
SRPRA-202ENST00000527817 WDR5P61964 334 aaKnown RBP14.54□□□□□ -0.08
SRPRA-202ENST00000527817 GPNMBQ14956 572 aa14.54□□□□□ -0.08
SRPRA-202ENST00000527817 PPP2R5BQ15173 497 aa14.54□□□□□ -0.08
SRPRA-202ENST00000527817 SPRED2Q7Z698 418 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms