RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 NECAB1Q8N987 351 aa23.93■■□□□ 1.42
CD44-222ENST00000526025 LLPHQ9BRT6 129 aaKnown RBP23.93■■□□□ 1.42
CD44-222ENST00000526025 hCG_1642624A0A1W2PR95 340 aa23.92■■□□□ 1.42
CD44-222ENST00000526025 POTEB2H3BUK9 544 aa23.92■■□□□ 1.42
CD44-222ENST00000526025 CD2BP2O95400 341 aaKnown RBP23.92■■□□□ 1.42
CD44-222ENST00000526025 CTDNEP1O95476 244 aa23.92■■□□□ 1.42
CD44-222ENST00000526025 RPS6P62753 249 aaKnown RBP23.92■■□□□ 1.42
CD44-222ENST00000526025 ST3GAL1Q11201 340 aa23.92■■□□□ 1.42
CD44-222ENST00000526025 CCDC12Q8WUD4 166 aaPredicted RBP23.92■■□□□ 1.42
CD44-222ENST00000526025 GLT8D2Q9H1C3 349 aa23.92■■□□□ 1.42
CD44-222ENST00000526025 MCM3APO60318 1980 aa23.91■■□□□ 1.42
CD44-222ENST00000526025 ESYT2A0FGR8 921 aa23.91■■□□□ 1.42
CD44-222ENST00000526025 STXBP3O00186 592 aa23.91■■□□□ 1.42
CD44-222ENST00000526025 PIK3CDO00329 1044 aa23.91■■□□□ 1.42
CD44-222ENST00000526025 PGK2P07205 417 aa23.91■■□□□ 1.42
CD44-222ENST00000526025 GRK4P32298 578 aa23.91■■□□□ 1.42
CD44-222ENST00000526025 BAATQ14032 418 aaPredicted RBP23.91■■□□□ 1.42
CD44-222ENST00000526025 NSUN7Q8NE18 718 aaKnown RBP23.91■■□□□ 1.42
CD44-222ENST00000526025 NPLOC4Q8TAT6 608 aa23.91■■□□□ 1.42
CD44-222ENST00000526025 MAML3Q96JK9 1138 aa23.91■■□□□ 1.42
CD44-222ENST00000526025 MCOLN1Q9GZU1 580 aa23.91■■□□□ 1.42
CD44-222ENST00000526025 SH3GLB2Q9NR46 395 aa23.91■■□□□ 1.42
CD44-222ENST00000526025 HTTP42858 3142 aa23.9■■□□□ 1.42
CD44-222ENST00000526025 PTPDC1A2A3K4 754 aa23.9■■□□□ 1.42
CD44-222ENST00000526025 MAMDC4Q6UXC1 1216 aa23.9■■□□□ 1.42
CD44-222ENST00000526025 SLC30A10Q6XR72 485 aa23.9■■□□□ 1.42
CD44-222ENST00000526025 DNERQ8NFT8 737 aa23.9■■□□□ 1.42
CD44-222ENST00000526025 WASF1Q92558 559 aa23.9■■□□□ 1.42
CD44-222ENST00000526025 GPKOWQ92917 476 aaPredicted RBP eCLIP23.9■■□□□ 1.42
CD44-222ENST00000526025 SNX21Q969T3 373 aa23.9■■□□□ 1.42
CD44-222ENST00000526025 TMX3Q96JJ7 454 aa23.9■■□□□ 1.42
CD44-222ENST00000526025 ADD3Q9UEY8 706 aaKnown RBP23.9■■□□□ 1.42
CD44-222ENST00000526025 GCOM1H8Y6P7 765 aaPredicted RBP23.89■■□□□ 1.41
CD44-222ENST00000526025 HMGCRP04035 888 aa23.89■■□□□ 1.41
CD44-222ENST00000526025 POLR2MP0CAP2 368 aa23.89■■□□□ 1.41
CD44-222ENST00000526025 NAPAP54920 295 aa23.89■■□□□ 1.41
CD44-222ENST00000526025 CCDC83Q8IWF9 413 aa23.89■■□□□ 1.41
CD44-222ENST00000526025 CCDC148Q8NFR7 591 aa23.89■■□□□ 1.41
CD44-222ENST00000526025 SYTL5Q8TDW5 730 aaPredicted RBP23.89■■□□□ 1.41
CD44-222ENST00000526025 TRIB2Q92519 343 aa23.89■■□□□ 1.41
CD44-222ENST00000526025 ARMC5Q96C12 935 aa23.89■■□□□ 1.41
CD44-222ENST00000526025 FGD4Q96M96 766 aa23.89■■□□□ 1.41
CD44-222ENST00000526025 SYNGAP1Q96PV0 1343 aa23.88■■□□□ 1.41
CD44-222ENST00000526025 LRRC37A2A6NM11 1700 aa23.88■■□□□ 1.41
CD44-222ENST00000526025 CFBP00751 764 aa23.88■■□□□ 1.41
CD44-222ENST00000526025 SLC9C1Q4G0N8 1177 aa23.88■■□□□ 1.41
CD44-222ENST00000526025 COL13A1Q5TAT6 717 aaPredicted RBP23.88■■□□□ 1.41
CD44-222ENST00000526025 TYW1BQ6NUM6 668 aa23.88■■□□□ 1.41
CD44-222ENST00000526025 SMARCC2Q8TAQ2 1214 aa23.88■■□□□ 1.41
CD44-222ENST00000526025 PSTPIP2Q9H939 334 aa23.88■■□□□ 1.41
CD44-222ENST00000526025 ORC3Q9UBD5 711 aaPredicted RBP23.88■■□□□ 1.41
CD44-222ENST00000526025 SOWAHBA6NEL2 793 aa23.87■■□□□ 1.41
CD44-222ENST00000526025 CALML3P27482 149 aa23.87■■□□□ 1.41
CD44-222ENST00000526025 MRPL12P52815 198 aaKnown RBP23.87■■□□□ 1.41
CD44-222ENST00000526025 HMGN5P82970 282 aaKnown RBP23.87■■□□□ 1.41
CD44-222ENST00000526025 CNTN2Q02246 1040 aa23.87■■□□□ 1.41
CD44-222ENST00000526025 CCL14Q16627 93 aa23.87■■□□□ 1.41
CD44-222ENST00000526025 MORC4Q8TE76 937 aa23.87■■□□□ 1.41
CD44-222ENST00000526025 TBC1D5Q92609 795 aa23.87■■□□□ 1.41
CD44-222ENST00000526025 CUL5Q93034 780 aa23.87■■□□□ 1.41
CD44-222ENST00000526025 TINF2Q9BSI4 451 aa23.87■■□□□ 1.41
CD44-222ENST00000526025 ZMYND12Q9H0C1 365 aa23.87■■□□□ 1.41
CD44-222ENST00000526025 RIC8AQ9NPQ8 531 aa23.87■■□□□ 1.41
CD44-222ENST00000526025 FLRT1Q9NZU1 646 aa23.87■■□□□ 1.41
CD44-222ENST00000526025 NRBP1Q9UHY1 535 aa23.87■■□□□ 1.41
CD44-222ENST00000526025 ASB14A6NK59 587 aa23.86■■□□□ 1.41
CD44-222ENST00000526025 FDPSP14324 419 aaKnown RBP23.86■■□□□ 1.41
CD44-222ENST00000526025 ELNP15502 786 aa23.86■■□□□ 1.41
CD44-222ENST00000526025 MFSD14CQ5VZR4 134 aa23.86■■□□□ 1.41
CD44-222ENST00000526025 MPHOSPH6Q99547 160 aaKnown RBP23.86■■□□□ 1.41
CD44-222ENST00000526025 ASTN1O14525 1302 aa23.85■■□□□ 1.41
CD44-222ENST00000526025 FRMPD4Q14CM0 1322 aa23.85■■□□□ 1.41
CD44-222ENST00000526025 B4DLN1 442 aa23.85■■□□□ 1.41
CD44-222ENST00000526025 MEIS2O14770 477 aa23.85■■□□□ 1.41
CD44-222ENST00000526025 GNA11P29992 359 aa23.85■■□□□ 1.41
CD44-222ENST00000526025 ALDH5A1P51649 535 aaPredicted RBP23.85■■□□□ 1.41
CD44-222ENST00000526025 ADCY7P51828 1080 aa23.85■■□□□ 1.41
CD44-222ENST00000526025 MAP3K21Q5TCX8 1036 aa23.85■■□□□ 1.41
CD44-222ENST00000526025 GALNT17Q6IS24 598 aa23.85■■□□□ 1.41
CD44-222ENST00000526025 NSUN6Q8TEA1 469 aaKnown RBP23.85■■□□□ 1.41
CD44-222ENST00000526025 COL20A1Q9P218 1284 aa23.85■■□□□ 1.41
CD44-222ENST00000526025 SMCO2A6NFE2 343 aa23.84■■□□□ 1.41
CD44-222ENST00000526025 INHAP05111 366 aa23.84■■□□□ 1.41
CD44-222ENST00000526025 XBP1P17861 261 aa23.84■■□□□ 1.41
CD44-222ENST00000526025 UBXN2AP68543 259 aa23.84■■□□□ 1.41
CD44-222ENST00000526025 MCTP2Q6DN12 878 aa23.84■■□□□ 1.41
CD44-222ENST00000526025 IWS1Q96ST2 819 aa23.84■■□□□ 1.41
CD44-222ENST00000526025 C6orf50Q9HD87 102 aa23.84■■□□□ 1.41
CD44-222ENST00000526025 KIAA1217Q5T5P2 1943 aa23.83■■□□□ 1.41
CD44-222ENST00000526025 JAK2O60674 1132 aa23.83■■□□□ 1.41
CD44-222ENST00000526025 PPFIA3O75145 1194 aa23.83■■□□□ 1.41
CD44-222ENST00000526025 EDNRBP24530 442 aa23.83■■□□□ 1.41
CD44-222ENST00000526025 CUL4AQ13619 759 aa23.83■■□□□ 1.41
CD44-222ENST00000526025 BICD2Q8TD16 824 aa23.83■■□□□ 1.41
CD44-222ENST00000526025 ZNF333Q96JL9 665 aa23.83■■□□□ 1.41
CD44-222ENST00000526025 RMDN3Q96TC7 470 aa23.83■■□□□ 1.41
CD44-222ENST00000526025 VPS54Q9P1Q0 977 aa23.83■■□□□ 1.41
CD44-222ENST00000526025 K7ELQ4 463 aaPredicted RBP23.82■■□□□ 1.4
CD44-222ENST00000526025 FOSP01100 380 aaPredicted RBP23.82■■□□□ 1.4
CD44-222ENST00000526025 HOXA13P31271 388 aaPredicted RBP23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms