RNA–Protein interactions for RNA: ENST00000523990.1

FBXO28-205, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-205ENST00000523990 VTA1Q9NP79 307 aa22.26■■□□□ 1.15
FBXO28-205ENST00000523990 A0A1W2PQ45 241 aaPredicted RBP22.25■■□□□ 1.15
FBXO28-205ENST00000523990 A0A1W2PQY0 241 aa22.25■■□□□ 1.15
FBXO28-205ENST00000523990 CYTH3O43739 400 aa22.25■■□□□ 1.15
FBXO28-205ENST00000523990 DDAH1O94760 285 aa22.25■■□□□ 1.15
FBXO28-205ENST00000523990 CENPBP07199 599 aaPredicted RBP22.25■■□□□ 1.15
FBXO28-205ENST00000523990 GJA9P57773 515 aa22.25■■□□□ 1.15
FBXO28-205ENST00000523990 RTP1P59025 263 aa22.25■■□□□ 1.15
FBXO28-205ENST00000523990 CCSAPQ6IQ19 270 aaPredicted RBP22.25■■□□□ 1.15
FBXO28-205ENST00000523990 TAPT1Q6NXT6 567 aa22.25■■□□□ 1.15
FBXO28-205ENST00000523990 EEPD1Q7L9B9 569 aa22.25■■□□□ 1.15
FBXO28-205ENST00000523990 DNERQ8NFT8 737 aa22.25■■□□□ 1.15
FBXO28-205ENST00000523990 TSEN34Q9BSV6 310 aaKnown RBP22.25■■□□□ 1.15
FBXO28-205ENST00000523990 MYL10Q9BUA6 226 aa22.25■■□□□ 1.15
FBXO28-205ENST00000523990 AMNQ9BXJ7 453 aa22.25■■□□□ 1.15
FBXO28-205ENST00000523990 PPP4R2Q9NY27 417 aa22.25■■□□□ 1.15
FBXO28-205ENST00000523990 MRPL11Q9Y3B7 192 aaKnown RBP22.25■■□□□ 1.15
FBXO28-205ENST00000523990 SYN1P17600 705 aa22.24■■□□□ 1.15
FBXO28-205ENST00000523990 EDNRBP24530 442 aa22.24■■□□□ 1.15
FBXO28-205ENST00000523990 LIFRP42702 1097 aa22.24■■□□□ 1.15
FBXO28-205ENST00000523990 IRX5P78411 483 aaPredicted RBP22.24■■□□□ 1.15
FBXO28-205ENST00000523990 TNFAIP2Q03169 654 aa22.24■■□□□ 1.15
FBXO28-205ENST00000523990 HOMER1Q86YM7 354 aa22.24■■□□□ 1.15
FBXO28-205ENST00000523990 RASEFQ8IZ41 740 aa22.24■■□□□ 1.15
FBXO28-205ENST00000523990 NUP133Q8WUM0 1156 aa22.24■■□□□ 1.15
FBXO28-205ENST00000523990 TBC1D5Q92609 795 aa22.24■■□□□ 1.15
FBXO28-205ENST00000523990 PDGFCQ9NRA1 345 aa22.24■■□□□ 1.15
FBXO28-205ENST00000523990 RBM27Q9P2N5 1060 aaKnown RBP22.24■■□□□ 1.15
FBXO28-205ENST00000523990 GNEQ9Y223 722 aaKnown RBP22.24■■□□□ 1.15
FBXO28-205ENST00000523990 MOXD2PA6NHM9 499 aa22.23■■□□□ 1.15
FBXO28-205ENST00000523990 OPLAHO14841 1288 aa22.23■■□□□ 1.15
FBXO28-205ENST00000523990 C6orf222P0C671 652 aaPredicted RBP22.23■■□□□ 1.15
FBXO28-205ENST00000523990 NKX3-2P78367 333 aa22.23■■□□□ 1.15
FBXO28-205ENST00000523990 TSGA10IPQ3SY00 556 aa22.23■■□□□ 1.15
FBXO28-205ENST00000523990 C1orf53Q5VUE5 145 aa22.23■■□□□ 1.15
FBXO28-205ENST00000523990 MCF2L2Q86YR7 1114 aa22.23■■□□□ 1.15
FBXO28-205ENST00000523990 TMTC2Q8N394 836 aa22.23■■□□□ 1.15
FBXO28-205ENST00000523990 PIGSQ96S52 555 aa22.23■■□□□ 1.15
FBXO28-205ENST00000523990 LRRC2Q9BYS8 371 aa22.23■■□□□ 1.15
FBXO28-205ENST00000523990 SPC25Q9HBM1 224 aa22.23■■□□□ 1.15
FBXO28-205ENST00000523990 COL20A1Q9P218 1284 aa22.23■■□□□ 1.15
FBXO28-205ENST00000523990 CTAGE5O15320 804 aa22.23■■□□□ 1.15
FBXO28-205ENST00000523990 ACLYP53396 1101 aa22.23■■□□□ 1.15
FBXO28-205ENST00000523990 KCNA10Q16322 511 aa22.23■■□□□ 1.15
FBXO28-205ENST00000523990 SYTL5Q8TDW5 730 aaPredicted RBP22.23■■□□□ 1.15
FBXO28-205ENST00000523990 NEK1Q96PY6 1258 aa22.23■■□□□ 1.15
FBXO28-205ENST00000523990 PCDH10Q9P2E7 1040 aa22.23■■□□□ 1.15
FBXO28-205ENST00000523990 ATP11BQ9Y2G3 1177 aa22.23■■□□□ 1.15
FBXO28-205ENST00000523990 CCDC69A6NI79 296 aa22.22■■□□□ 1.15
FBXO28-205ENST00000523990 SMPD1P17405 629 aa22.22■■□□□ 1.15
FBXO28-205ENST00000523990 GHRHRQ02643 423 aa22.22■■□□□ 1.15
FBXO28-205ENST00000523990 ADCK5Q3MIX3 580 aa22.22■■□□□ 1.15
FBXO28-205ENST00000523990 TRIM60Q495X7 471 aa22.22■■□□□ 1.15
FBXO28-205ENST00000523990 TMEM63BQ5T3F8 832 aa22.22■■□□□ 1.15
FBXO28-205ENST00000523990 IQSEC1Q6DN90 963 aa22.22■■□□□ 1.15
FBXO28-205ENST00000523990 NFXL1Q6ZNB6 911 aa22.22■■□□□ 1.15
FBXO28-205ENST00000523990 TLK2Q86UE8 772 aa22.22■■□□□ 1.15
FBXO28-205ENST00000523990 SGMS1Q86VZ5 419 aa22.22■■□□□ 1.15
FBXO28-205ENST00000523990 CTCFLQ8NI51 663 aaPredicted RBP22.22■■□□□ 1.15
FBXO28-205ENST00000523990 MPHOSPH6Q99547 160 aaKnown RBP22.22■■□□□ 1.15
FBXO28-205ENST00000523990 GDF15Q99988 308 aa22.22■■□□□ 1.15
FBXO28-205ENST00000523990 PCDHA1Q9Y5I3 950 aa22.22■■□□□ 1.15
FBXO28-205ENST00000523990 PTGS1P23219 599 aa22.21■■□□□ 1.15
FBXO28-205ENST00000523990 KIF5BP33176 963 aa22.21■■□□□ 1.15
FBXO28-205ENST00000523990 PDE4DQ08499 809 aa22.21■■□□□ 1.15
FBXO28-205ENST00000523990 PCSK9Q8NBP7 692 aaKnown RBP22.21■■□□□ 1.15
FBXO28-205ENST00000523990 SPZ1Q9BXG8 430 aa22.21■■□□□ 1.15
FBXO28-205ENST00000523990 RBM47A0AV96 593 aaKnown RBP22.2■■□□□ 1.14
FBXO28-205ENST00000523990 ASGR1P07306 291 aa22.2■■□□□ 1.14
FBXO28-205ENST00000523990 HSD17B4P51659 736 aa22.2■■□□□ 1.14
FBXO28-205ENST00000523990 KRT32Q14532 448 aa22.2■■□□□ 1.14
FBXO28-205ENST00000523990 NOL8Q76FK4 1167 aaKnown RBP22.2■■□□□ 1.14
FBXO28-205ENST00000523990 TAAR1Q96RJ0 339 aa22.2■■□□□ 1.14
FBXO28-205ENST00000523990 STARD7Q9NQZ5 370 aa22.2■■□□□ 1.14
FBXO28-205ENST00000523990 PNMA6FA0A0J9YX94 578 aa22.19■■□□□ 1.14
FBXO28-205ENST00000523990 CFBP00751 764 aa22.19■■□□□ 1.14
FBXO28-205ENST00000523990 RXRAP19793 462 aa22.19■■□□□ 1.14
FBXO28-205ENST00000523990 MAGEA10P43363 369 aaPredicted RBP22.19■■□□□ 1.14
FBXO28-205ENST00000523990 EXOSC10Q01780 885 aaKnown RBP22.19■■□□□ 1.14
FBXO28-205ENST00000523990 DUSP28Q4G0W2 176 aa22.19■■□□□ 1.14
FBXO28-205ENST00000523990 GNASQ5JWF2 1037 aa22.19■■□□□ 1.14
FBXO28-205ENST00000523990 KCNB2Q92953 911 aa22.19■■□□□ 1.14
FBXO28-205ENST00000523990 Q9Y3F1 56 aa22.19■■□□□ 1.14
FBXO28-205ENST00000523990 SLC12A7Q9Y666 1083 aa22.19■■□□□ 1.14
FBXO28-205ENST00000523990 B4DLN1 442 aa22.18■■□□□ 1.14
FBXO28-205ENST00000523990 PLEKHA8P1O95397 391 aa22.18■■□□□ 1.14
FBXO28-205ENST00000523990 CALM1P0DP23 149 aa22.18■■□□□ 1.14
FBXO28-205ENST00000523990 CALM2P0DP24 149 aa22.18■■□□□ 1.14
FBXO28-205ENST00000523990 CALM3P0DP25 149 aa22.18■■□□□ 1.14
FBXO28-205ENST00000523990 SMARCA1P28370 1054 aa22.18■■□□□ 1.14
FBXO28-205ENST00000523990 MRPL12P52815 198 aaKnown RBP22.18■■□□□ 1.14
FBXO28-205ENST00000523990 BEX3Q00994 111 aa22.18■■□□□ 1.14
FBXO28-205ENST00000523990 TRAF1Q13077 416 aa22.18■■□□□ 1.14
FBXO28-205ENST00000523990 DHX32Q7L7V1 743 aaKnown RBP22.18■■□□□ 1.14
FBXO28-205ENST00000523990 NSUN6Q8TEA1 469 aaKnown RBP22.18■■□□□ 1.14
FBXO28-205ENST00000523990 TCEANC2Q96MN5 208 aa22.18■■□□□ 1.14
FBXO28-205ENST00000523990 RMDN3Q96TC7 470 aa22.18■■□□□ 1.14
FBXO28-205ENST00000523990 WDR11Q9BZH6 1224 aa22.18■■□□□ 1.14
FBXO28-205ENST00000523990 BMP8BP34820 402 aa22.17■■□□□ 1.14
FBXO28-205ENST00000523990 HSPA4P34932 840 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms