RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 TMEM87BQ96K49 555 aa20.08■□□□□ 0.81
CCNC-213ENST00000523541 AMNQ9BXJ7 453 aa20.08■□□□□ 0.81
CCNC-213ENST00000523541 ANO2Q9NQ90 1003 aa20.08■□□□□ 0.81
CCNC-213ENST00000523541 ASTN1O14525 1302 aa20.07■□□□□ 0.8
CCNC-213ENST00000523541 ELP1O95163 1332 aa20.07■□□□□ 0.8
CCNC-213ENST00000523541 A0A1W2PQ45 241 aaPredicted RBP20.07■□□□□ 0.8
CCNC-213ENST00000523541 A0A1W2PQY0 241 aa20.07■□□□□ 0.8
CCNC-213ENST00000523541 SLC27A2O14975 620 aa20.07■□□□□ 0.8
CCNC-213ENST00000523541 ZBTB5O15062 677 aa20.07■□□□□ 0.8
CCNC-213ENST00000523541 CALML3P27482 149 aa20.07■□□□□ 0.8
CCNC-213ENST00000523541 SMARCA1P28370 1054 aa20.07■□□□□ 0.8
CCNC-213ENST00000523541 ACLYP53396 1101 aa20.07■□□□□ 0.8
CCNC-213ENST00000523541 QRICH1Q2TAL8 776 aa20.07■□□□□ 0.8
CCNC-213ENST00000523541 CREB3L3Q68CJ9 461 aa20.07■□□□□ 0.8
CCNC-213ENST00000523541 TAPT1Q6NXT6 567 aa20.07■□□□□ 0.8
CCNC-213ENST00000523541 EEPD1Q7L9B9 569 aa20.07■□□□□ 0.8
CCNC-213ENST00000523541 TDHQ8IZJ6 230 aa20.07■□□□□ 0.8
CCNC-213ENST00000523541 STAG2Q8N3U4 1231 aa20.07■□□□□ 0.8
CCNC-213ENST00000523541 SEZ6LQ9BYH1 1024 aa20.07■□□□□ 0.8
CCNC-213ENST00000523541 RIOX1Q9H6W3 641 aa20.07■□□□□ 0.8
CCNC-213ENST00000523541 STARD7Q9NQZ5 370 aa20.07■□□□□ 0.8
CCNC-213ENST00000523541 TAF6LQ9Y6J9 622 aa20.07■□□□□ 0.8
CCNC-213ENST00000523541 RBM47A0AV96 593 aaKnown RBP20.06■□□□□ 0.8
CCNC-213ENST00000523541 PQBP1O60828 265 aaKnown RBP20.06■□□□□ 0.8
CCNC-213ENST00000523541 EDNRBP24530 442 aa20.06■□□□□ 0.8
CCNC-213ENST00000523541 LIFRP42702 1097 aa20.06■□□□□ 0.8
CCNC-213ENST00000523541 KCNA10Q16322 511 aa20.06■□□□□ 0.8
CCNC-213ENST00000523541 TSGA10IPQ3SY00 556 aa20.06■□□□□ 0.8
CCNC-213ENST00000523541 USH1GQ495M9 461 aa20.06■□□□□ 0.8
CCNC-213ENST00000523541 TOX2Q96NM4 488 aa20.06■□□□□ 0.8
CCNC-213ENST00000523541 CPVLQ9H3G5 476 aa20.06■□□□□ 0.8
CCNC-213ENST00000523541 VAT1LQ9HCJ6 419 aa20.06■□□□□ 0.8
CCNC-213ENST00000523541 GNEQ9Y223 722 aaKnown RBP20.06■□□□□ 0.8
CCNC-213ENST00000523541 MCM3APO60318 1980 aa20.05■□□□□ 0.8
CCNC-213ENST00000523541 ZEB2O60315 1214 aa20.05■□□□□ 0.8
CCNC-213ENST00000523541 CABYRO75952 493 aa20.05■□□□□ 0.8
CCNC-213ENST00000523541 DDAH1O94760 285 aa20.05■□□□□ 0.8
CCNC-213ENST00000523541 KIF5BP33176 963 aa20.05■□□□□ 0.8
CCNC-213ENST00000523541 ANTXR2P58335 489 aa20.05■□□□□ 0.8
CCNC-213ENST00000523541 GHRHRQ02643 423 aa20.05■□□□□ 0.8
CCNC-213ENST00000523541 GNASQ5JWF2 1037 aa20.05■□□□□ 0.8
CCNC-213ENST00000523541 GLT1D1Q96MS3 346 aa20.05■□□□□ 0.8
CCNC-213ENST00000523541 IWS1Q96ST2 819 aa20.05■□□□□ 0.8
CCNC-213ENST00000523541 LZTS2Q9BRK4 669 aa20.05■□□□□ 0.8
CCNC-213ENST00000523541 AP5M1Q9H0R1 490 aa20.05■□□□□ 0.8
CCNC-213ENST00000523541 NKRFO15226 690 aaKnown RBP eCLIP20.04■□□□□ 0.8
CCNC-213ENST00000523541 PRC1O43663 620 aa20.04■□□□□ 0.8
CCNC-213ENST00000523541 CALM1P0DP23 149 aa20.04■□□□□ 0.8
CCNC-213ENST00000523541 CALM2P0DP24 149 aa20.04■□□□□ 0.8
CCNC-213ENST00000523541 CALM3P0DP25 149 aa20.04■□□□□ 0.8
CCNC-213ENST00000523541 GNAQP50148 359 aa20.04■□□□□ 0.8
CCNC-213ENST00000523541 TLE2Q04725 743 aa20.04■□□□□ 0.8
CCNC-213ENST00000523541 PDE4DQ08499 809 aa20.04■□□□□ 0.8
CCNC-213ENST00000523541 DUSP28Q4G0W2 176 aa20.04■□□□□ 0.8
CCNC-213ENST00000523541 SLC30A10Q6XR72 485 aa20.04■□□□□ 0.8
CCNC-213ENST00000523541 CHST3Q7LGC8 479 aa20.04■□□□□ 0.8
CCNC-213ENST00000523541 ANKRD33Q7Z3H0 272 aa20.04■□□□□ 0.8
CCNC-213ENST00000523541 FBXO16Q8IX29 292 aaPredicted RBP20.04■□□□□ 0.8
CCNC-213ENST00000523541 NSUN6Q8TEA1 469 aaKnown RBP20.04■□□□□ 0.8
CCNC-213ENST00000523541 PURBQ96QR8 312 aaKnown RBP20.04■□□□□ 0.8
CCNC-213ENST00000523541 LY9Q9HBG7 655 aa20.04■□□□□ 0.8
CCNC-213ENST00000523541 DDX49Q9Y6V7 483 aaKnown RBP20.04■□□□□ 0.8
CCNC-213ENST00000523541 MROH7Q68CQ1 1323 aa20.03■□□□□ 0.8
CCNC-213ENST00000523541 MYADML2A6NDP7 307 aa20.03■□□□□ 0.8
CCNC-213ENST00000523541 ADCY6O43306 1168 aa20.03■□□□□ 0.8
CCNC-213ENST00000523541 ASGR1P07306 291 aa20.03■□□□□ 0.8
CCNC-213ENST00000523541 KRT32Q14532 448 aa20.03■□□□□ 0.8
CCNC-213ENST00000523541 LRCH3Q96II8 777 aa20.03■□□□□ 0.8
CCNC-213ENST00000523541 PNMA6FA0A0J9YX94 578 aa20.02■□□□□ 0.8
CCNC-213ENST00000523541 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.02■□□□□ 0.8
CCNC-213ENST00000523541 DCDC2CA8MYV0 355 aa20.02■□□□□ 0.8
CCNC-213ENST00000523541 SOX1O00570 391 aaPredicted RBP20.02■□□□□ 0.8
CCNC-213ENST00000523541 CLTBP09497 229 aa20.02■□□□□ 0.8
CCNC-213ENST00000523541 SMPD1P17405 629 aa20.02■□□□□ 0.8
CCNC-213ENST00000523541 TLK2Q86UE8 772 aa20.02■□□□□ 0.8
CCNC-213ENST00000523541 CTCFLQ8NI51 663 aaPredicted RBP20.02■□□□□ 0.8
CCNC-213ENST00000523541 SYTL5Q8TDW5 730 aaPredicted RBP20.02■□□□□ 0.8
CCNC-213ENST00000523541 WDR11Q9BZH6 1224 aa20.02■□□□□ 0.8
CCNC-213ENST00000523541 PDLIM7Q9NR12 457 aa20.02■□□□□ 0.8
CCNC-213ENST00000523541 PCDHA1Q9Y5I3 950 aa20.02■□□□□ 0.8
CCNC-213ENST00000523541 CCDC69A6NI79 296 aa20.01■□□□□ 0.79
CCNC-213ENST00000523541 SH2B2O14492 632 aaPredicted RBP20.01■□□□□ 0.79
CCNC-213ENST00000523541 CTAGE5O15320 804 aa20.01■□□□□ 0.79
CCNC-213ENST00000523541 DYNC1LI2O43237 492 aaPredicted RBP20.01■□□□□ 0.79
CCNC-213ENST00000523541 HMGB1P09429 215 aaKnown RBP20.01■□□□□ 0.79
CCNC-213ENST00000523541 HSD17B4P51659 736 aa20.01■□□□□ 0.79
CCNC-213ENST00000523541 IRX5P78411 483 aaPredicted RBP20.01■□□□□ 0.79
CCNC-213ENST00000523541 BEX3Q00994 111 aa20.01■□□□□ 0.79
CCNC-213ENST00000523541 FSCN1Q16658 493 aaKnown RBP20.01■□□□□ 0.79
CCNC-213ENST00000523541 ZNF654Q8IZM8 581 aa20.01■□□□□ 0.79
CCNC-213ENST00000523541 SCFD2Q8WU76 684 aa20.01■□□□□ 0.79
CCNC-213ENST00000523541 NEK1Q96PY6 1258 aa20.01■□□□□ 0.79
CCNC-213ENST00000523541 SPZ1Q9BXG8 430 aa20.01■□□□□ 0.79
CCNC-213ENST00000523541 SENP2Q9HC62 589 aa20.01■□□□□ 0.79
CCNC-213ENST00000523541 PDGFCQ9NRA1 345 aa20.01■□□□□ 0.79
CCNC-213ENST00000523541 TMEM39AQ9NV64 488 aa20.01■□□□□ 0.79
CCNC-213ENST00000523541 EPB41L2O43491 1005 aaKnown RBP20■□□□□ 0.79
CCNC-213ENST00000523541 RAG1P15918 1043 aa20■□□□□ 0.79
CCNC-213ENST00000523541 CDK7P50613 346 aa20■□□□□ 0.79
CCNC-213ENST00000523541 STXBP2Q15833 593 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms