RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 KIRREL1Q96J84 757 aa7.59□□□□□ -1.19
SKP1-208ENST00000521216 FANCLQ9NW38 375 aa7.59□□□□□ -1.19
SKP1-208ENST00000521216 IMPACTQ9P2X3 320 aa7.59□□□□□ -1.19
SKP1-208ENST00000521216 A0A1W2PQJ5 194 aa7.58□□□□□ -1.2
SKP1-208ENST00000521216 BIN1O00499 593 aa7.58□□□□□ -1.2
SKP1-208ENST00000521216 NRDCO43847 1150 aa7.58□□□□□ -1.2
SKP1-208ENST00000521216 PRKCAP17252 672 aa7.58□□□□□ -1.2
SKP1-208ENST00000521216 CEBPAP49715 358 aaPredicted RBP7.58□□□□□ -1.2
SKP1-208ENST00000521216 IRAK1P51617 712 aa7.58□□□□□ -1.2
SKP1-208ENST00000521216 MBLAC2Q68D91 279 aa7.58□□□□□ -1.2
SKP1-208ENST00000521216 CCDC103Q8IW40 242 aa7.58□□□□□ -1.2
SKP1-208ENST00000521216 CHAMP1Q96JM3 812 aa7.58□□□□□ -1.2
SKP1-208ENST00000521216 MMP19Q99542 508 aa7.58□□□□□ -1.2
SKP1-208ENST00000521216 PLCD4Q9BRC7 762 aa7.58□□□□□ -1.2
SKP1-208ENST00000521216 C7orf72A4D263 438 aa7.57□□□□□ -1.2
SKP1-208ENST00000521216 ARNTLO00327 626 aa7.57□□□□□ -1.2
SKP1-208ENST00000521216 SMARCA5O60264 1052 aaPredicted RBP7.57□□□□□ -1.2
SKP1-208ENST00000521216 NPHS1O60500 1241 aa7.57□□□□□ -1.2
SKP1-208ENST00000521216 LCP1P13796 627 aa7.57□□□□□ -1.2
SKP1-208ENST00000521216 LTBRP36941 435 aa7.57□□□□□ -1.2
SKP1-208ENST00000521216 KCNAB2Q13303 367 aa7.57□□□□□ -1.2
SKP1-208ENST00000521216 NTRK3Q16288 839 aa7.57□□□□□ -1.2
SKP1-208ENST00000521216 ACBD5Q5T8D3 534 aaPredicted RBP7.57□□□□□ -1.2
SKP1-208ENST00000521216 E4F1Q66K89 784 aaPredicted RBP7.57□□□□□ -1.2
SKP1-208ENST00000521216 KCNT2Q6UVM3 1135 aa7.57□□□□□ -1.2
SKP1-208ENST00000521216 CBLL1Q75N03 491 aa7.57□□□□□ -1.2
SKP1-208ENST00000521216 ATG4DQ86TL0 474 aaPredicted RBP7.57□□□□□ -1.2
SKP1-208ENST00000521216 HOMER1Q86YM7 354 aa7.57□□□□□ -1.2
SKP1-208ENST00000521216 FLAD1Q8NFF5 587 aa7.57□□□□□ -1.2
SKP1-208ENST00000521216 USP33Q8TEY7 942 aa7.57□□□□□ -1.2
SKP1-208ENST00000521216 APPBP2Q92624 585 aa7.57□□□□□ -1.2
SKP1-208ENST00000521216 PHF20Q9BVI0 1012 aa7.57□□□□□ -1.2
SKP1-208ENST00000521216 GULP1Q9UBP9 304 aa7.57□□□□□ -1.2
SKP1-208ENST00000521216 TBX22Q9Y458 520 aa7.57□□□□□ -1.2
SKP1-208ENST00000521216 PCDHA2Q9Y5H9 948 aa7.57□□□□□ -1.2
SKP1-208ENST00000521216 NOTOA8MTQ0 251 aa7.56□□□□□ -1.2
SKP1-208ENST00000521216 MYO1BO43795 1136 aa7.56□□□□□ -1.2
SKP1-208ENST00000521216 ASMTLO95671 621 aa7.56□□□□□ -1.2
SKP1-208ENST00000521216 TACR1P25103 407 aa7.56□□□□□ -1.2
SKP1-208ENST00000521216 NR0B2Q15466 257 aa7.56□□□□□ -1.2
SKP1-208ENST00000521216 LILRA2Q8N149 483 aa7.56□□□□□ -1.2
SKP1-208ENST00000521216 RCBTB1Q8NDN9 531 aa7.56□□□□□ -1.2
SKP1-208ENST00000521216 DCAF4Q8WV16 495 aa7.56□□□□□ -1.2
SKP1-208ENST00000521216 KISS1RQ969F8 398 aaPredicted RBP7.56□□□□□ -1.2
SKP1-208ENST00000521216 RNF32Q9H0A6 362 aa7.56□□□□□ -1.2
SKP1-208ENST00000521216 SP110Q9HB58 689 aa7.56□□□□□ -1.2
SKP1-208ENST00000521216 TMEM260Q9NX78 707 aa7.56□□□□□ -1.2
SKP1-208ENST00000521216 NDOR1Q9UHB4 597 aa7.56□□□□□ -1.2
SKP1-208ENST00000521216 RWDD3Q9Y3V2 267 aa7.56□□□□□ -1.2
SKP1-208ENST00000521216 TRAF6Q9Y4K3 522 aa7.56□□□□□ -1.2
SKP1-208ENST00000521216 TIMM13Q9Y5L4 95 aaPredicted RBP7.56□□□□□ -1.2
SKP1-208ENST00000521216 CCDC163A0A0D9SF12 145 aa7.55□□□□□ -1.2
SKP1-208ENST00000521216 PPP1R12AO14974 1030 aaPredicted RBP7.55□□□□□ -1.2
SKP1-208ENST00000521216 CDC45O75419 566 aa7.55□□□□□ -1.2
SKP1-208ENST00000521216 CYP4F8P98187 520 aa7.55□□□□□ -1.2
SKP1-208ENST00000521216 KCNMB1Q16558 191 aa7.55□□□□□ -1.2
SKP1-208ENST00000521216 ASIC4Q96FT7 647 aa7.55□□□□□ -1.2
SKP1-208ENST00000521216 MARCH2Q9P0N8 246 aa7.55□□□□□ -1.2
SKP1-208ENST00000521216 EFEMP2O95967 443 aa7.54□□□□□ -1.2
SKP1-208ENST00000521216 FUCA1P04066 466 aa7.54□□□□□ -1.2
SKP1-208ENST00000521216 MSL3P1P0C860 447 aa7.54□□□□□ -1.2
SKP1-208ENST00000521216 RPL11P62913 178 aaKnown RBP7.54□□□□□ -1.2
SKP1-208ENST00000521216 MVKQ03426 396 aa7.54□□□□□ -1.2
SKP1-208ENST00000521216 CBX2Q14781 532 aaPredicted RBP7.54□□□□□ -1.2
SKP1-208ENST00000521216 SNX17Q15036 470 aa7.54□□□□□ -1.2
SKP1-208ENST00000521216 C21orf62-AS1Q17RA5 79 aa7.54□□□□□ -1.2
SKP1-208ENST00000521216 BICRALQ6AI39 1079 aa7.54□□□□□ -1.2
SKP1-208ENST00000521216 SDE2Q6IQ49 451 aa7.54□□□□□ -1.2
SKP1-208ENST00000521216 NLRX1Q86UT6 975 aa7.54□□□□□ -1.2
SKP1-208ENST00000521216 PTPRN2Q92932 1015 aa7.54□□□□□ -1.2
SKP1-208ENST00000521216 MSCO60682 206 aa7.53□□□□□ -1.2
SKP1-208ENST00000521216 PPP1R11O60927 126 aaPredicted RBP7.53□□□□□ -1.2
SKP1-208ENST00000521216 RAPGEF3O95398 923 aa7.53□□□□□ -1.2
SKP1-208ENST00000521216 SDHBP21912 280 aa7.53□□□□□ -1.2
SKP1-208ENST00000521216 ARL4AP40617 200 aa7.53□□□□□ -1.2
SKP1-208ENST00000521216 BCL6P41182 706 aa7.53□□□□□ -1.2
SKP1-208ENST00000521216 GABREP78334 506 aa7.53□□□□□ -1.2
SKP1-208ENST00000521216 CEP68Q76N32 757 aa7.53□□□□□ -1.2
SKP1-208ENST00000521216 ZSWIM9Q86XI8 627 aa7.53□□□□□ -1.2
SKP1-208ENST00000521216 TEX2Q8IWB9 1127 aa7.53□□□□□ -1.2
SKP1-208ENST00000521216 NLGN1Q8N2Q7 840 aa7.53□□□□□ -1.2
SKP1-208ENST00000521216 LZTR1Q8N653 840 aa7.53□□□□□ -1.2
SKP1-208ENST00000521216 DPF3Q92784 378 aa7.53□□□□□ -1.2
SKP1-208ENST00000521216 PDLIM7Q9NR12 457 aa7.53□□□□□ -1.2
SKP1-208ENST00000521216 GPR27Q9NS67 375 aa7.53□□□□□ -1.2
SKP1-208ENST00000521216 ACSL6Q9UKU0 697 aa7.53□□□□□ -1.2
SKP1-208ENST00000521216 ASXL2Q76L83 1435 aa7.52□□□□□ -1.2
SKP1-208ENST00000521216 PAPLNO95428 1278 aa7.52□□□□□ -1.21
SKP1-208ENST00000521216 C6orf222P0C671 652 aaPredicted RBP7.52□□□□□ -1.21
SKP1-208ENST00000521216 PDE6BP35913 854 aa7.52□□□□□ -1.21
SKP1-208ENST00000521216 TCEA2Q15560 299 aa7.52□□□□□ -1.21
SKP1-208ENST00000521216 STYK1Q6J9G0 422 aa7.52□□□□□ -1.21
SKP1-208ENST00000521216 MPZL3Q6UWV2 235 aa7.52□□□□□ -1.21
SKP1-208ENST00000521216 C16orf86Q6ZW13 317 aa7.52□□□□□ -1.21
SKP1-208ENST00000521216 IFNL3Q8IZI9 196 aa7.52□□□□□ -1.21
SKP1-208ENST00000521216 NLGN2Q8NFZ4 835 aa7.52□□□□□ -1.21
SKP1-208ENST00000521216 FAM168AQ92567 244 aa7.52□□□□□ -1.21
SKP1-208ENST00000521216 SHISA4Q96DD7 197 aa7.52□□□□□ -1.21
SKP1-208ENST00000521216 TRMT2BQ96GJ1 504 aaKnown RBP7.52□□□□□ -1.21
SKP1-208ENST00000521216 NCOA5Q9HCD5 579 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms