RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 UPF3AQ9H1J1 476 aaKnown RBP10.26□□□□□ -0.77
PABPC1-213ENST00000519848 TTYH1Q9H313 450 aaPredicted RBP10.26□□□□□ -0.77
PABPC1-213ENST00000519848 PRDM5Q9NQX1 630 aaPredicted RBP10.26□□□□□ -0.77
PABPC1-213ENST00000519848 FEM1BQ9UK73 627 aa10.26□□□□□ -0.77
PABPC1-213ENST00000519848 DIS3Q9Y2L1 958 aaKnown RBP10.26□□□□□ -0.77
PABPC1-213ENST00000519848 CCDC171Q6TFL3 1326 aa10.26□□□□□ -0.77
PABPC1-213ENST00000519848 SYNGAP1Q96PV0 1343 aa10.26□□□□□ -0.77
PABPC1-213ENST00000519848 SCN5AQ14524 2016 aa10.26□□□□□ -0.77
PABPC1-213ENST00000519848 UNC80Q8N2C7 3258 aa10.25□□□□□ -0.77
PABPC1-213ENST00000519848 PRUNE2Q8WUY3 3088 aa10.25□□□□□ -0.77
PABPC1-213ENST00000519848 KBTBD13C9JR72 458 aa10.25□□□□□ -0.77
PABPC1-213ENST00000519848 NRG2O14511 850 aaPredicted RBP10.25□□□□□ -0.77
PABPC1-213ENST00000519848 PQBP1O60828 265 aaKnown RBP10.25□□□□□ -0.77
PABPC1-213ENST00000519848 RARBP10826 455 aa10.25□□□□□ -0.77
PABPC1-213ENST00000519848 AKR1A1P14550 325 aa10.25□□□□□ -0.77
PABPC1-213ENST00000519848 ACVR2BQ13705 512 aa10.25□□□□□ -0.77
PABPC1-213ENST00000519848 ALX1Q15699 326 aa10.25□□□□□ -0.77
PABPC1-213ENST00000519848 KCNA10Q16322 511 aa10.25□□□□□ -0.77
PABPC1-213ENST00000519848 CCDC144BQ3MJ40 725 aa10.25□□□□□ -0.77
PABPC1-213ENST00000519848 C1orf53Q5VUE5 145 aa10.25□□□□□ -0.77
PABPC1-213ENST00000519848 ZNF787Q6DD87 383 aa10.25□□□□□ -0.77
PABPC1-213ENST00000519848 C16orf59Q7L2K0 433 aa10.25□□□□□ -0.77
PABPC1-213ENST00000519848 SKAP1Q86WV1 359 aa10.25□□□□□ -0.77
PABPC1-213ENST00000519848 FBXO16Q8IX29 292 aaPredicted RBP10.25□□□□□ -0.77
PABPC1-213ENST00000519848 CLEC4DQ8WXI8 215 aa10.25□□□□□ -0.77
PABPC1-213ENST00000519848 ZNF775Q96BV0 537 aaPredicted RBP10.25□□□□□ -0.77
PABPC1-213ENST00000519848 ZKSCAN3Q9BRR0 538 aa10.25□□□□□ -0.77
PABPC1-213ENST00000519848 TBX21Q9UL17 535 aa10.25□□□□□ -0.77
PABPC1-213ENST00000519848 SYNPO2Q9UMS6 1093 aa10.25□□□□□ -0.77
PABPC1-213ENST00000519848 STX8Q9UNK0 236 aa10.25□□□□□ -0.77
PABPC1-213ENST00000519848 GNEQ9Y223 722 aaKnown RBP10.25□□□□□ -0.77
PABPC1-213ENST00000519848 ZMYM6O95789 1325 aa10.25□□□□□ -0.77
PABPC1-213ENST00000519848 TANC1Q9C0D5 1861 aa10.25□□□□□ -0.77
PABPC1-213ENST00000519848 TSPY2A6NKD2 308 aa10.24□□□□□ -0.77
PABPC1-213ENST00000519848 PDHBP11177 359 aa10.24□□□□□ -0.77
PABPC1-213ENST00000519848 ALAS1P13196 640 aa10.24□□□□□ -0.77
PABPC1-213ENST00000519848 SMPD1P17405 629 aa10.24□□□□□ -0.77
PABPC1-213ENST00000519848 SDSP20132 328 aa10.24□□□□□ -0.77
PABPC1-213ENST00000519848 COL9A1P20849 921 aa10.24□□□□□ -0.77
PABPC1-213ENST00000519848 CST5P28325 142 aaPredicted RBP10.24□□□□□ -0.77
PABPC1-213ENST00000519848 SLC1A4P43007 532 aa10.24□□□□□ -0.77
PABPC1-213ENST00000519848 STAT2P52630 851 aa10.24□□□□□ -0.77
PABPC1-213ENST00000519848 IRX6P78412 446 aaPredicted RBP10.24□□□□□ -0.77
PABPC1-213ENST00000519848 NUCB1Q02818 461 aa10.24□□□□□ -0.77
PABPC1-213ENST00000519848 RRP12Q5JTH9 1297 aaKnown RBP10.24□□□□□ -0.77
PABPC1-213ENST00000519848 TAPT1Q6NXT6 567 aa10.24□□□□□ -0.77
PABPC1-213ENST00000519848 EEPD1Q7L9B9 569 aa10.24□□□□□ -0.77
PABPC1-213ENST00000519848 LAPTM4BQ86VI4 370 aa10.24□□□□□ -0.77
PABPC1-213ENST00000519848 STAG1Q8WVM7 1258 aa10.24□□□□□ -0.77
PABPC1-213ENST00000519848 ZFRQ96KR1 1074 aaKnown RBP10.24□□□□□ -0.77
PABPC1-213ENST00000519848 RANBP17Q9H2T7 1088 aaKnown RBP10.24□□□□□ -0.77
PABPC1-213ENST00000519848 GPCPD1Q9NPB8 672 aa10.24□□□□□ -0.77
PABPC1-213ENST00000519848 HELLSQ9NRZ9 838 aa10.24□□□□□ -0.77
PABPC1-213ENST00000519848 CYP39A1Q9NYL5 469 aa10.24□□□□□ -0.77
PABPC1-213ENST00000519848 NRBP1Q9UHY1 535 aa10.24□□□□□ -0.77
PABPC1-213ENST00000519848 REV3LO60673 3130 aa10.23□□□□□ -0.77
PABPC1-213ENST00000519848 CHD9Q3L8U1 2897 aa10.23□□□□□ -0.77
PABPC1-213ENST00000519848 KIAA0355O15063 1070 aa10.23□□□□□ -0.77
PABPC1-213ENST00000519848 RANBP6O60518 1105 aaKnown RBP10.23□□□□□ -0.77
PABPC1-213ENST00000519848 ASGR1P07306 291 aa10.23□□□□□ -0.77
PABPC1-213ENST00000519848 GOLGA8HP0CJ92 632 aa10.23□□□□□ -0.77
PABPC1-213ENST00000519848 SNHG28P0DPA3 235 aa10.23□□□□□ -0.77
PABPC1-213ENST00000519848 CDK7P50613 346 aa10.23□□□□□ -0.77
PABPC1-213ENST00000519848 OAZ1P54368 228 aa10.23□□□□□ -0.77
PABPC1-213ENST00000519848 NKX3-2P78367 333 aa10.23□□□□□ -0.77
PABPC1-213ENST00000519848 PDE4BQ07343 736 aa10.23□□□□□ -0.77
PABPC1-213ENST00000519848 MCMDC2Q4G0Z9 681 aa10.23□□□□□ -0.77
PABPC1-213ENST00000519848 BTNL9Q6UXG8 535 aa10.23□□□□□ -0.77
PABPC1-213ENST00000519848 CHD1LQ86WJ1 897 aa10.23□□□□□ -0.77
PABPC1-213ENST00000519848 FAM126BQ8IXS8 530 aa10.23□□□□□ -0.77
PABPC1-213ENST00000519848 ARRDC4Q8NCT1 418 aa10.23□□□□□ -0.77
PABPC1-213ENST00000519848 TBC1D5Q92609 795 aa10.23□□□□□ -0.77
PABPC1-213ENST00000519848 DDX11Q96FC9 970 aa10.23□□□□□ -0.77
PABPC1-213ENST00000519848 NACAP1Q9BZK3 213 aa10.23□□□□□ -0.77
PABPC1-213ENST00000519848 ACAD9Q9H845 621 aa10.23□□□□□ -0.77
PABPC1-213ENST00000519848 SENP2Q9HC62 589 aa10.23□□□□□ -0.77
PABPC1-213ENST00000519848 COL20A1Q9P218 1284 aa10.23□□□□□ -0.77
PABPC1-213ENST00000519848 SCN10AQ9Y5Y9 1956 aa10.23□□□□□ -0.77
PABPC1-213ENST00000519848 GRXCR1A8MXD5 290 aa10.22□□□□□ -0.77
PABPC1-213ENST00000519848 OPLAHO14841 1288 aa10.22□□□□□ -0.77
PABPC1-213ENST00000519848 PLA2G6O60733 806 aa10.22□□□□□ -0.77
PABPC1-213ENST00000519848 ZBED4O75132 1171 aa10.22□□□□□ -0.77
PABPC1-213ENST00000519848 DUSP11O75319 330 aaKnown RBP10.22□□□□□ -0.77
PABPC1-213ENST00000519848 CLTBP09497 229 aa10.22□□□□□ -0.77
PABPC1-213ENST00000519848 C6orf222P0C671 652 aaPredicted RBP10.22□□□□□ -0.77
PABPC1-213ENST00000519848 GJA9P57773 515 aa10.22□□□□□ -0.77
PABPC1-213ENST00000519848 PSMC6P62333 389 aa10.22□□□□□ -0.77
PABPC1-213ENST00000519848 CCDC96Q2M329 555 aa10.22□□□□□ -0.77
PABPC1-213ENST00000519848 CXCL17Q6UXB2 119 aa10.22□□□□□ -0.77
PABPC1-213ENST00000519848 ANKRD33Q7Z3H0 272 aa10.22□□□□□ -0.77
PABPC1-213ENST00000519848 ANKRD35Q8N283 1001 aa10.22□□□□□ -0.77
PABPC1-213ENST00000519848 CHST13Q8NET6 341 aa10.22□□□□□ -0.77
PABPC1-213ENST00000519848 MORC4Q8TE76 937 aa10.22□□□□□ -0.77
PABPC1-213ENST00000519848 COPS5Q92905 334 aa10.22□□□□□ -0.77
PABPC1-213ENST00000519848 RILPL2Q969X0 211 aa10.22□□□□□ -0.77
PABPC1-213ENST00000519848 TRERF1Q96PN7 1200 aa10.22□□□□□ -0.77
PABPC1-213ENST00000519848 OSBPL3Q9H4L5 887 aa10.22□□□□□ -0.77
PABPC1-213ENST00000519848 ISY1Q9ULR0 285 aaKnown RBP10.22□□□□□ -0.77
PABPC1-213ENST00000519848 CNPY2Q9Y2B0 182 aa10.22□□□□□ -0.77
PABPC1-213ENST00000519848 CHD7Q9P2D1 2997 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms