RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 TAP1Q03518 808 aa14.67□□□□□ -0.06
TRAPPC9-204ENST00000518723 PDE4BQ07343 736 aa14.67□□□□□ -0.06
TRAPPC9-204ENST00000518723 IKQ13123 557 aaPredicted RBP14.67□□□□□ -0.06
TRAPPC9-204ENST00000518723 PWP2Q15269 919 aaKnown RBP14.67□□□□□ -0.06
TRAPPC9-204ENST00000518723 MUM1L1Q5H9M0 696 aa14.67□□□□□ -0.06
TRAPPC9-204ENST00000518723 PPP4R3BQ5MIZ7 849 aa14.67□□□□□ -0.06
TRAPPC9-204ENST00000518723 KIAA1211Q6ZU35 1233 aa14.67□□□□□ -0.06
TRAPPC9-204ENST00000518723 DEFB128Q7Z7B8 93 aa14.67□□□□□ -0.06
TRAPPC9-204ENST00000518723 ECHDC1Q9NTX5 307 aa14.67□□□□□ -0.06
TRAPPC9-204ENST00000518723 ISY1Q9ULR0 285 aaKnown RBP14.67□□□□□ -0.06
TRAPPC9-204ENST00000518723 RBM47A0AV96 593 aaKnown RBP14.66□□□□□ -0.06
TRAPPC9-204ENST00000518723 PATL2C9JE40 543 aaKnown RBP14.66□□□□□ -0.06
TRAPPC9-204ENST00000518723 MCCP23508 829 aa14.66□□□□□ -0.06
TRAPPC9-204ENST00000518723 CPT1AP50416 773 aa14.66□□□□□ -0.06
TRAPPC9-204ENST00000518723 TFAP4Q01664 338 aa14.66□□□□□ -0.06
TRAPPC9-204ENST00000518723 TMEM31Q5JXX7 168 aa14.66□□□□□ -0.06
TRAPPC9-204ENST00000518723 IFNL3Q8IZI9 196 aa14.66□□□□□ -0.06
TRAPPC9-204ENST00000518723 HLA-CQ95604 372 aa14.66□□□□□ -0.06
TRAPPC9-204ENST00000518723 MTG1Q9BT17 334 aaPredicted RBP14.66□□□□□ -0.06
TRAPPC9-204ENST00000518723 CERS4Q9HA82 394 aa14.66□□□□□ -0.06
TRAPPC9-204ENST00000518723 GPR37L1O60883 481 aa14.65□□□□□ -0.06
TRAPPC9-204ENST00000518723 ARHGEF15O94989 841 aa14.65□□□□□ -0.06
TRAPPC9-204ENST00000518723 APPP05067 770 aa14.65□□□□□ -0.06
TRAPPC9-204ENST00000518723 KRT40Q6A162 431 aa14.65□□□□□ -0.06
TRAPPC9-204ENST00000518723 RCSD1Q6JBY9 416 aa14.65□□□□□ -0.06
TRAPPC9-204ENST00000518723 NFRKBQ6P4R8 1299 aa14.65□□□□□ -0.06
TRAPPC9-204ENST00000518723 HERC6Q8IVU3 1022 aa14.65□□□□□ -0.06
TRAPPC9-204ENST00000518723 ARNTL2Q8WYA1 636 aa14.65□□□□□ -0.06
TRAPPC9-204ENST00000518723 WDR11Q9BZH6 1224 aa14.65□□□□□ -0.06
TRAPPC9-204ENST00000518723 CHMP4BQ9H444 224 aaKnown RBP14.65□□□□□ -0.06
TRAPPC9-204ENST00000518723 ADD3Q9UEY8 706 aaKnown RBP14.65□□□□□ -0.06
TRAPPC9-204ENST00000518723 CCPG1Q9ULG6 757 aa14.65□□□□□ -0.06
TRAPPC9-204ENST00000518723 PRR12Q9ULL5 1215 aa14.65□□□□□ -0.06
TRAPPC9-204ENST00000518723 MUC6Q6W4X9 2439 aa14.64□□□□□ -0.07
TRAPPC9-204ENST00000518723 KIF28PB7ZC32 967 aa14.64□□□□□ -0.07
TRAPPC9-204ENST00000518723 M0R2C6 588 aa14.64□□□□□ -0.07
TRAPPC9-204ENST00000518723 BAIAP3O94812 1187 aa14.64□□□□□ -0.07
TRAPPC9-204ENST00000518723 ICAM1P05362 532 aa14.64□□□□□ -0.07
TRAPPC9-204ENST00000518723 SLC3A2P08195 630 aaKnown RBP14.64□□□□□ -0.07
TRAPPC9-204ENST00000518723 IQCF3P0C7M6 154 aa14.64□□□□□ -0.07
TRAPPC9-204ENST00000518723 ALDH5A1P51649 535 aaPredicted RBP14.64□□□□□ -0.07
TRAPPC9-204ENST00000518723 HNRNPUQ00839 825 aaKnown RBP eCLIP14.64□□□□□ -0.07
TRAPPC9-204ENST00000518723 NBPF20Q3BBV1 942 aa14.64□□□□□ -0.07
TRAPPC9-204ENST00000518723 NSMFQ6X4W1 530 aa14.64□□□□□ -0.07
TRAPPC9-204ENST00000518723 KCTD1Q719H9 257 aa14.64□□□□□ -0.07
TRAPPC9-204ENST00000518723 PURBQ96QR8 312 aaKnown RBP14.64□□□□□ -0.07
TRAPPC9-204ENST00000518723 NACAP1Q9BZK3 213 aa14.64□□□□□ -0.07
TRAPPC9-204ENST00000518723 GPHNQ9NQX3 736 aaPredicted RBP14.64□□□□□ -0.07
TRAPPC9-204ENST00000518723 NKRFO15226 690 aaKnown RBP eCLIP14.63□□□□□ -0.07
TRAPPC9-204ENST00000518723 SMARCA5O60264 1052 aaPredicted RBP14.63□□□□□ -0.07
TRAPPC9-204ENST00000518723 KPNA6O60684 536 aa14.63□□□□□ -0.07
TRAPPC9-204ENST00000518723 LPXNO60711 386 aa14.63□□□□□ -0.07
TRAPPC9-204ENST00000518723 MYL3P08590 195 aa14.63□□□□□ -0.07
TRAPPC9-204ENST00000518723 SNAP25P60880 206 aa14.63□□□□□ -0.07
TRAPPC9-204ENST00000518723 PTPN11Q06124 597 aaPredicted RBP14.63□□□□□ -0.07
TRAPPC9-204ENST00000518723 PPARAQ07869 468 aa14.63□□□□□ -0.07
TRAPPC9-204ENST00000518723 GRB10Q13322 594 aa14.63□□□□□ -0.07
TRAPPC9-204ENST00000518723 BFSP2Q13515 415 aa14.63□□□□□ -0.07
TRAPPC9-204ENST00000518723 BRDTQ58F21 947 aaPredicted RBP14.63□□□□□ -0.07
TRAPPC9-204ENST00000518723 RETREG2Q8NC44 543 aa14.63□□□□□ -0.07
TRAPPC9-204ENST00000518723 OR6J1Q8NGC5 347 aa14.63□□□□□ -0.07
TRAPPC9-204ENST00000518723 RANBP17Q9H2T7 1088 aaKnown RBP14.63□□□□□ -0.07
TRAPPC9-204ENST00000518723 C11orf16Q9NQ32 467 aa14.63□□□□□ -0.07
TRAPPC9-204ENST00000518723 LMCD1Q9NZU5 365 aa14.63□□□□□ -0.07
TRAPPC9-204ENST00000518723 RAD50Q92878 1312 aa14.63□□□□□ -0.07
TRAPPC9-204ENST00000518723 BRWD1Q9NSI6 2320 aa14.63□□□□□ -0.07
TRAPPC9-204ENST00000518723 SCN10AQ9Y5Y9 1956 aa14.62□□□□□ -0.07
TRAPPC9-204ENST00000518723 A6NJR5 290 aa14.62□□□□□ -0.07
TRAPPC9-204ENST00000518723 NOVP48745 357 aa14.62□□□□□ -0.07
TRAPPC9-204ENST00000518723 BAATQ14032 418 aaPredicted RBP14.62□□□□□ -0.07
TRAPPC9-204ENST00000518723 LRRFIP1Q32MZ4 808 aaKnown RBP14.62□□□□□ -0.07
TRAPPC9-204ENST00000518723 FAM47CQ5HY64 1035 aa14.62□□□□□ -0.07
TRAPPC9-204ENST00000518723 KHSRPQ92945 711 aaKnown RBP eCLIP14.62□□□□□ -0.07
TRAPPC9-204ENST00000518723 GPATCH3Q96I76 525 aa14.62□□□□□ -0.07
TRAPPC9-204ENST00000518723 FTOQ9C0B1 505 aaKnown RBP eCLIP14.62□□□□□ -0.07
TRAPPC9-204ENST00000518723 STX8Q9UNK0 236 aa14.62□□□□□ -0.07
TRAPPC9-204ENST00000518723 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.62□□□□□ -0.07
TRAPPC9-204ENST00000518723 LCTP09848 1927 aa14.62□□□□□ -0.07
TRAPPC9-204ENST00000518723 PI4K2BG5E9Z4 385 aa14.61□□□□□ -0.07
TRAPPC9-204ENST00000518723 BTNL9Q6UXG8 535 aa14.61□□□□□ -0.07
TRAPPC9-204ENST00000518723 RASGRP2Q7LDG7 609 aa14.61□□□□□ -0.07
TRAPPC9-204ENST00000518723 DCAF4Q8WV16 495 aa14.61□□□□□ -0.07
TRAPPC9-204ENST00000518723 CHMP4CQ96CF2 233 aa14.61□□□□□ -0.07
TRAPPC9-204ENST00000518723 NAPBQ9H115 298 aa14.61□□□□□ -0.07
TRAPPC9-204ENST00000518723 IL17RBQ9NRM6 502 aa14.61□□□□□ -0.07
TRAPPC9-204ENST00000518723 SCN5AQ14524 2016 aa14.6□□□□□ -0.07
TRAPPC9-204ENST00000518723 TSPY2A6NKD2 308 aa14.6□□□□□ -0.07
TRAPPC9-204ENST00000518723 NFIBO00712 420 aa14.6□□□□□ -0.07
TRAPPC9-204ENST00000518723 EDNRBP24530 442 aa14.6□□□□□ -0.07
TRAPPC9-204ENST00000518723 KCNJ6P48051 423 aa14.6□□□□□ -0.07
TRAPPC9-204ENST00000518723 PPP2R5BQ15173 497 aa14.6□□□□□ -0.07
TRAPPC9-204ENST00000518723 SPRED2Q7Z698 418 aa14.6□□□□□ -0.07
TRAPPC9-204ENST00000518723 CAGE1Q8TC20 777 aa14.6□□□□□ -0.07
TRAPPC9-204ENST00000518723 AFAP1L1Q8TED9 768 aa14.6□□□□□ -0.07
TRAPPC9-204ENST00000518723 SCFD2Q8WU76 684 aa14.6□□□□□ -0.07
TRAPPC9-204ENST00000518723 TANC1Q9C0D5 1861 aa14.6□□□□□ -0.07
TRAPPC9-204ENST00000518723 NMT2O60551 498 aa14.59□□□□□ -0.07
TRAPPC9-204ENST00000518723 WDR5P61964 334 aaKnown RBP14.59□□□□□ -0.07
TRAPPC9-204ENST00000518723 TSHZ3Q63HK5 1081 aa14.59□□□□□ -0.07
TRAPPC9-204ENST00000518723 CCDC155Q8N6L0 562 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms