RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 A0A1W2PQY0 241 aa12.4□□□□□ -0.42
PDGFRB-203ENST00000517660 ASB14A6NK59 587 aa12.4□□□□□ -0.42
PDGFRB-203ENST00000517660 PI4K2BG5E9Z4 385 aa12.4□□□□□ -0.42
PDGFRB-203ENST00000517660 KDM4AO75164 1064 aa12.4□□□□□ -0.42
PDGFRB-203ENST00000517660 TIMP1P01033 207 aa12.4□□□□□ -0.42
PDGFRB-203ENST00000517660 SNHG28P0DPA3 235 aa12.4□□□□□ -0.42
PDGFRB-203ENST00000517660 ZNF543Q08ER8 600 aa12.4□□□□□ -0.42
PDGFRB-203ENST00000517660 ARMCX2Q7L311 632 aa12.4□□□□□ -0.42
PDGFRB-203ENST00000517660 ANKRD33Q7Z3H0 272 aa12.4□□□□□ -0.42
PDGFRB-203ENST00000517660 MICALL1Q8N3F8 863 aa12.4□□□□□ -0.42
PDGFRB-203ENST00000517660 ZKSCAN3Q9BRR0 538 aa12.4□□□□□ -0.42
PDGFRB-203ENST00000517660 TSEN34Q9BSV6 310 aaKnown RBP12.4□□□□□ -0.42
PDGFRB-203ENST00000517660 KRT23Q9C075 422 aa12.4□□□□□ -0.42
PDGFRB-203ENST00000517660 RAD50Q92878 1312 aa12.39□□□□□ -0.43
PDGFRB-203ENST00000517660 SOWAHBA6NEL2 793 aa12.39□□□□□ -0.43
PDGFRB-203ENST00000517660 B4E1Z4 1266 aa12.39□□□□□ -0.43
PDGFRB-203ENST00000517660 ADAMTS4O75173 837 aa12.39□□□□□ -0.43
PDGFRB-203ENST00000517660 DUSP11O75319 330 aaKnown RBP12.39□□□□□ -0.43
PDGFRB-203ENST00000517660 ACRP10323 421 aa12.39□□□□□ -0.43
PDGFRB-203ENST00000517660 CHMLP26374 656 aa12.39□□□□□ -0.43
PDGFRB-203ENST00000517660 MUM1L1Q5H9M0 696 aa12.39□□□□□ -0.43
PDGFRB-203ENST00000517660 GPATCH4Q5T3I0 446 aaKnown RBP12.39□□□□□ -0.43
PDGFRB-203ENST00000517660 MFSD5Q6N075 450 aa12.39□□□□□ -0.43
PDGFRB-203ENST00000517660 CCDC144CPQ8IYA2 1237 aa12.39□□□□□ -0.43
PDGFRB-203ENST00000517660 ZSCAN10Q96SZ4 725 aaPredicted RBP12.39□□□□□ -0.43
PDGFRB-203ENST00000517660 IL25Q9H293 177 aa12.39□□□□□ -0.43
PDGFRB-203ENST00000517660 KAT14Q9H8E8 782 aa12.39□□□□□ -0.43
PDGFRB-203ENST00000517660 CNNM2Q9H8M5 875 aa12.39□□□□□ -0.43
PDGFRB-203ENST00000517660 CYP39A1Q9NYL5 469 aa12.39□□□□□ -0.43
PDGFRB-203ENST00000517660 ZSWIM5Q9P217 1185 aa12.39□□□□□ -0.43
PDGFRB-203ENST00000517660 PRR33A8MZF0 331 aa12.38□□□□□ -0.43
PDGFRB-203ENST00000517660 CSF2RAP15509 400 aa12.38□□□□□ -0.43
PDGFRB-203ENST00000517660 BAATQ14032 418 aaPredicted RBP12.38□□□□□ -0.43
PDGFRB-203ENST00000517660 AAK1Q2M2I8 961 aa12.38□□□□□ -0.43
PDGFRB-203ENST00000517660 CCDC144BQ3MJ40 725 aa12.38□□□□□ -0.43
PDGFRB-203ENST00000517660 KRT40Q6A162 431 aa12.38□□□□□ -0.43
PDGFRB-203ENST00000517660 NSMFQ6X4W1 530 aa12.38□□□□□ -0.43
PDGFRB-203ENST00000517660 ZNF365Q70YC5 407 aa12.38□□□□□ -0.43
PDGFRB-203ENST00000517660 PNMA1Q8ND90 353 aa12.38□□□□□ -0.43
PDGFRB-203ENST00000517660 KLHDC9Q8NEP7 349 aa12.38□□□□□ -0.43
PDGFRB-203ENST00000517660 LENG1Q96BZ8 264 aaPredicted RBP12.38□□□□□ -0.43
PDGFRB-203ENST00000517660 SPC25Q9HBM1 224 aa12.38□□□□□ -0.43
PDGFRB-203ENST00000517660 PARP14Q460N5 1801 aa12.38□□□□□ -0.43
PDGFRB-203ENST00000517660 CFAP54Q96N23 3096 aa12.38□□□□□ -0.43
PDGFRB-203ENST00000517660 GBF1Q92538 1859 aa12.38□□□□□ -0.43
PDGFRB-203ENST00000517660 MOXD2PA6NHM9 499 aa12.37□□□□□ -0.43
PDGFRB-203ENST00000517660 RFXAPO00287 272 aa12.37□□□□□ -0.43
PDGFRB-203ENST00000517660 GOLGA8HP0CJ92 632 aa12.37□□□□□ -0.43
PDGFRB-203ENST00000517660 MYOGP15173 224 aa12.37□□□□□ -0.43
PDGFRB-203ENST00000517660 ACLYP53396 1101 aa12.37□□□□□ -0.43
PDGFRB-203ENST00000517660 GJA9P57773 515 aa12.37□□□□□ -0.43
PDGFRB-203ENST00000517660 RAB30Q15771 203 aa12.37□□□□□ -0.43
PDGFRB-203ENST00000517660 KCNA10Q16322 511 aa12.37□□□□□ -0.43
PDGFRB-203ENST00000517660 CCSAPQ6IQ19 270 aaPredicted RBP12.37□□□□□ -0.43
PDGFRB-203ENST00000517660 ENAHQ8N8S7 591 aaPredicted RBP12.37□□□□□ -0.43
PDGFRB-203ENST00000517660 HERVK_113Q902F9 699 aa12.37□□□□□ -0.43
PDGFRB-203ENST00000517660 TOX2Q96NM4 488 aa12.37□□□□□ -0.43
PDGFRB-203ENST00000517660 UBAC1Q9BSL1 405 aa12.37□□□□□ -0.43
PDGFRB-203ENST00000517660 UBA5Q9GZZ9 404 aa12.37□□□□□ -0.43
PDGFRB-203ENST00000517660 KATNBL1Q9H079 304 aa12.37□□□□□ -0.43
PDGFRB-203ENST00000517660 TSPYL2Q9H2G4 693 aaPredicted RBP12.37□□□□□ -0.43
PDGFRB-203ENST00000517660 MTCH2Q9Y6C9 303 aa12.37□□□□□ -0.43
PDGFRB-203ENST00000517660 U3KPZ7 1027 aaPredicted RBP12.37□□□□□ -0.43
PDGFRB-203ENST00000517660 MYH4Q9Y623 1939 aa12.37□□□□□ -0.43
PDGFRB-203ENST00000517660 WDR19Q8NEZ3 1342 aa12.37□□□□□ -0.43
PDGFRB-203ENST00000517660 SYNRGQ9UMZ2 1314 aa12.37□□□□□ -0.43
PDGFRB-203ENST00000517660 CACNA1AO00555 2505 aa12.36□□□□□ -0.43
PDGFRB-203ENST00000517660 EPOPA6NHQ4 379 aa12.36□□□□□ -0.43
PDGFRB-203ENST00000517660 CST5P28325 142 aaPredicted RBP12.36□□□□□ -0.43
PDGFRB-203ENST00000517660 RABGGTBP53611 331 aa12.36□□□□□ -0.43
PDGFRB-203ENST00000517660 TNFAIP2Q03169 654 aa12.36□□□□□ -0.43
PDGFRB-203ENST00000517660 TRDNQ13061 729 aa12.36□□□□□ -0.43
PDGFRB-203ENST00000517660 IQSEC1Q6DN90 963 aa12.36□□□□□ -0.43
PDGFRB-203ENST00000517660 PCSK9Q8NBP7 692 aaKnown RBP12.36□□□□□ -0.43
PDGFRB-203ENST00000517660 MORC4Q8TE76 937 aa12.36□□□□□ -0.43
PDGFRB-203ENST00000517660 NUP133Q8WUM0 1156 aa12.36□□□□□ -0.43
PDGFRB-203ENST00000517660 CLEC4DQ8WXI8 215 aa12.36□□□□□ -0.43
PDGFRB-203ENST00000517660 FBXL18Q96ME1 805 aa12.36□□□□□ -0.43
PDGFRB-203ENST00000517660 PHOX2BQ99453 314 aa12.36□□□□□ -0.43
PDGFRB-203ENST00000517660 UPF3AQ9H1J1 476 aaKnown RBP12.36□□□□□ -0.43
PDGFRB-203ENST00000517660 ADD3Q9UEY8 706 aaKnown RBP12.36□□□□□ -0.43
PDGFRB-203ENST00000517660 COL11A1P12107 1806 aaPredicted RBP12.36□□□□□ -0.43
PDGFRB-203ENST00000517660 TNKSO95271 1327 aa12.36□□□□□ -0.43
PDGFRB-203ENST00000517660 LOC102724159A0A0B4J2E5 919 aa12.35□□□□□ -0.43
PDGFRB-203ENST00000517660 PTPDC1A2A3K4 754 aa12.35□□□□□ -0.43
PDGFRB-203ENST00000517660 NFIBO00712 420 aa12.35□□□□□ -0.43
PDGFRB-203ENST00000517660 SGSM2O43147 1006 aa12.35□□□□□ -0.43
PDGFRB-203ENST00000517660 C6orf222P0C671 652 aaPredicted RBP12.35□□□□□ -0.43
PDGFRB-203ENST00000517660 POU3F3P20264 500 aaPredicted RBP12.35□□□□□ -0.43
PDGFRB-203ENST00000517660 NKX3-2P78367 333 aa12.35□□□□□ -0.43
PDGFRB-203ENST00000517660 PTH1RQ03431 593 aa12.35□□□□□ -0.43
PDGFRB-203ENST00000517660 PPIGQ13427 754 aaKnown RBP eCLIP12.35□□□□□ -0.43
PDGFRB-203ENST00000517660 PWP2Q15269 919 aaKnown RBP12.35□□□□□ -0.43
PDGFRB-203ENST00000517660 ASPRV1Q53RT3 343 aa12.35□□□□□ -0.43
PDGFRB-203ENST00000517660 GNASQ5JWF2 1037 aa12.35□□□□□ -0.43
PDGFRB-203ENST00000517660 IFIT1BQ5T764 474 aaKnown RBP12.35□□□□□ -0.43
PDGFRB-203ENST00000517660 RNF207Q6ZRF8 634 aa12.35□□□□□ -0.43
PDGFRB-203ENST00000517660 NOL8Q76FK4 1167 aaKnown RBP12.35□□□□□ -0.43
PDGFRB-203ENST00000517660 RGS22Q8NE09 1264 aa12.35□□□□□ -0.43
PDGFRB-203ENST00000517660 VWCEQ96DN2 955 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms